Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 5.2e-199 697.6 371 100.0
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 2.2e-104 383.3 364 64.0
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 6.3e-104 381.7 357 63.9
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 3.1e-103 379.4 364 65.9
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 7.0e-103 378.3 360 63.9
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 2.0e-102 376.7 346 62.7
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 1.9e-100 370.2 347 61.1
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 1.0e-98 364.4 356 65.4
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 8.3e-96 354.8 353 62.0
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 2.1e-91 340.1 350 61.1
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 2.3e-90 336.7 353 55.5
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 2.7e-86 323.2 370 54.1
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 1.0e-85 321.2 359 54.9
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 2.8e-83 313.2 360 55.8
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 6.8e-82 308.5 368 54.6
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 1.2e-81 307.8 364 53.8
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 1.5e-81 307.4 373 51.7
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.5e-81 307.4 359 54.9
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 9.8e-81 304.7 366 53.3
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 2.2e-80 303.5 385 51.2
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 8.3e-80 301.6 368 54.3
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 1.9e-79 300.4 354 52.0
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 2.4e-79 300.1 360 54.7
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 3.2e-79 299.7 364 54.1
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 5.4e-79 298.9 366 52.5
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 5.4e-79 298.9 364 53.3
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 5.4e-79 298.9 346 51.7
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 1.6e-78 297.4 375 53.6
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 1.6e-78 297.4 345 52.5
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 3.5e-78 296.2 358 53.9
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 4.6e-78 295.8 369 53.4
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 1.3e-77 294.3 368 52.4
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 3.9e-77 292.7 358 53.4
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 1.5e-76 290.8 344 54.9
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 3.3e-76 289.7 362 53.0
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 7.3e-76 288.5 385 51.7
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 2.1e-75 287.0 369 50.1
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 6.2e-75 285.4 361 51.2
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 1.1e-74 284.6 359 53.2
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 1.4e-74 284.3 373 51.5
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 1.4e-74 284.3 344 52.6
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 2.3e-74 283.5 373 52.0
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 5.8e-73 278.9 361 52.4
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 4.1e-71 272.7 447 44.3
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 3.5e-70 269.6 359 51.5
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 6.0e-70 268.9 379 48.8
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 7.8e-70 268.5 340 49.7
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 5.1e-69 265.8 409 45.5
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 8.6e-69 265.0 361 50.4
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 3.6e-67 259.6 351 47.6
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 6.2e-67 258.8 334 50.9
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 6.2e-67 258.8 340 52.4
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 2.4e-66 256.9 351 49.9
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 6.9e-66 255.4 461 42.1
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 8.9e-66 255.0 341 50.4
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 1.5e-65 254.2 363 46.6
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 3.4e-65 253.1 284 55.6
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 3.0e-61 240.0 377 48.0
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 1.2e-57 228.0 338 47.9
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 1.5e-57 227.6 372 44.4
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 2.0e-57 227.3 299 53.2
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 2.2e-56 223.8 303 52.1
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 1.4e-55 221.1 305 48.5
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 1.4e-55 221.1 342 45.9
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 4.2e-55 219.5 336 46.7
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 5.4e-55 219.2 389 41.9
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 1.8e-53 214.2 398 42.7
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 7.4e-52 208.8 350 46.0
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 3.6e-51 206.5 363 42.7
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 1.8e-50 204.1 310 45.8
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 1.8e-50 204.1 278 49.3
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 1.5e-49 201.1 420 41.4
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 9.9e-49 198.4 345 41.4
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 1.2e-46 191.4 368 42.4
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 4.6e-46 189.5 407 41.8
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 7.9e-46 188.7 403 40.7
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 8.7e-45 185.3 364 40.4
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 1.1e-44 184.9 357 42.3
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 4.3e-44 183.0 337 40.9
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 4.3e-44 183.0 370 38.6
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 5.6e-44 182.6 363 41.0
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 4.8e-43 179.5 357 41.2
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 6.2e-43 179.1 367 40.9
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 8.1e-43 178.7 350 40.6
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 3.1e-42 176.8 364 38.7
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 1.5e-41 174.5 358 39.1
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 5.8e-41 172.6 376 38.6
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 1.3e-40 171.4 360 39.7
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 3.8e-40 169.9 357 41.2
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 8.4e-40 168.7 347 40.3
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 3.0e-37 160.2 347 38.3
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 8.7e-37 158.7 347 38.3
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 8.2e-35 152.1 304 39.8
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 4.1e-34 149.8 367 36.2
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 3.2e-31 140.2 201 53.2
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 3.6e-30 136.7 357 36.1
Zm00001eb053670 Zea mays HOM05D006327 ORTHO05D007952 8.7e-29 132.1 343 36.2
Os05g0220900 Oryza sativa ssp. japonica HOM05D006327 ORTHO05D007952 3.3e-28 130.2 353 36.0
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 4.8e-27 126.3 222 42.8
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 9.1e-26 122.1 397 33.2
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 9.1e-26 122.1 322 37.6
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 3.4e-25 120.2 303 38.3
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 3.4e-25 120.2 343 33.5
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 8.8e-21 105.5 310 29.7
ATR0665G137 Amborella trichopoda HOM05D006327 ORTHO05D007952 1.7e-16 91.3 119 44.5
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 1.9e-15 87.8 52 76.9
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 9.4e-15 85.5 51 76.5
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 9.4e-15 85.5 51 76.5
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.2e-14 85.1 51 76.5
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.1e-14 84.3 51 76.5
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.1e-14 84.3 51 76.5
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.7e-14 84.0 51 74.5
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.0e-13 82.0 51 74.5
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.3e-13 80.9 51 74.5
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.0e-13 80.5 51 72.5
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 1.5e-12 78.2 47 76.6
SMO361G0693 Selaginella moellendorffii HOM05D006327 ORTHO05D007952 5.7e-12 76.3 202 32.7
Cpa.g.sc939.1 Carica papaya HOM05D006327 ORTHO05D007952 3.7e-11 73.6 62 66.1
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 9.1e-10 68.9 47 66.0
SMO361G0449 Selaginella moellendorffii HOM05D063101 ORTHO05D007952 3.5e-09 67.0 204 33.8
MSTRG.11411 Avicennia marina HOM05D006327 ORTHO05D007952 3.8e-08 63.5 87 40.2
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 3.2e-07 60.5 153 35.9


User provided reference genes

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