Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0070531 Lupinus albus HOM05D000503 ORTHO05D000361 6.8e-30 133.3 64 100.0
Ca_16216_v3 Cicer arietinum L. HOM05D000503 ORTHO05D000361 7.0e-11 70.1 46 73.9
Glyma.04G177900 Glycine max HOM05D000503 ORTHO05D000361 9.2e-11 69.7 46 76.1
Lj1g0015853 Lotus japonicus HOM05D000503 ORTHO05D000361 3.0e-09 64.7 46 73.9
Glyma.06G187000 Glycine max HOM05D000503 ORTHO05D000361 6.6e-09 63.5 46 67.4
Psat0s2917g0080 Pisum sativum HOM05D000503 ORTHO05D000361 1.9e-08 62.0 46 67.4
Manes.14G071300 Manihot esculenta HOM05D000503 ORTHO05D000361 2.5e-08 61.6 54 61.1
Medtr3g078613 Medicago truncatula HOM05D000503 ORTHO05D000361 2.5e-08 61.6 48 68.8
arahy.Tifrunner.gnm1.ann1.Q1XFSF Arachis hypogaea HOM05D000503 ORTHO05D000361 5.6e-08 60.5 49 69.4
arahy.Tifrunner.gnm1.ann1.QA99NK Arachis hypogaea HOM05D000503 ORTHO05D000361 5.6e-08 60.5 49 69.4
GSVIVG01007835001 Vitis vinifera HOM05D000503 ORTHO05D000361 7.3e-08 60.1 52 61.5
arahy.Tifrunner.gnm1.ann1.L8Y5Z3 Arachis hypogaea HOM05D000503 ORTHO05D000361 9.5e-08 59.7 46 71.7
Lalb_Chr07g0182491 Lupinus albus HOM05D000503 ORTHO05D000361 1.6e-07 58.9 51 60.8
arahy.Tifrunner.gnm1.ann1.JT9MTX Arachis hypogaea HOM05D000503 ORTHO05D000361 2.1e-07 58.5 46 69.6
MD14G1188400 Malus domestica HOM05D000503 ORTHO05D000361 2.1e-07 58.5 54 59.3
MD06G1182400 Malus domestica HOM05D000503 ORTHO05D000361 2.8e-07 58.2 54 59.3
Phvul.009G182800 Phaseolus vulgaris HOM05D000503 ORTHO05D000361 3.6e-07 57.8 46 71.7
Lalb_Chr08g0236131 Lupinus albus HOM05D000503 ORTHO05D000361 6.2e-07 57.0 46 65.2
Lalb_Chr12g0201321 Lupinus albus HOM05D000503 ORTHO05D000361 1.1e-06 56.2 51 60.8
Prupe.5G180500 Prunus persica HOM05D000503 ORTHO05D000361 1.4e-06 55.8 54 57.4
FvH4_5g16240 Fragaria vesca HOM05D000503 ORTHO05D000361 2.3e-06 55.1 48 62.5
FAN04G0740 Fragaria x ananassa HOM05D000503 ORTHO05D000361 2.3e-06 55.1 48 62.5
FAN08G1677 Fragaria x ananassa HOM05D000503 ORTHO05D000361 2.3e-06 55.1 48 64.6
FAN18G3937 Fragaria x ananassa HOM05D000503 ORTHO05D000361 2.3e-06 55.1 48 62.5
QL10p013702 Quercus lobata HOM05D000503 ORTHO05D000361 2.3e-06 55.1 54 61.1
Hma1.2p1_0002F.1_g002920 Hydrangea macrophylla HOM05D000503 ORTHO05D000361 3.1e-06 54.7 42 64.3
Medtr4g106590 Medicago truncatula HOM05D000503 ORTHO05D000361 3.1e-06 54.7 51 60.8
FAN13G1671 Fragaria x ananassa HOM05D000503 ORTHO05D000361 4.0e-06 54.3 48 62.5
Lj4g0019308 Lotus japonicus HOM05D000503 ORTHO05D000361 4.0e-06 54.3 44 65.9
Manes.06G099700 Manihot esculenta HOM05D000503 ORTHO05D000361 4.0e-06 54.3 54 59.3
Potri.015G070000 Populus trichocarpa HOM05D000503 ORTHO05D000361 4.0e-06 54.3 54 55.6
Cpa.g.sc35.27 Carica papaya HOM05D000503 ORTHO05D000361 6.8e-06 53.5 37 73.0
VMungo1309G3004 Vigna mungo HOM05D000503 ORTHO05D000361 6.8e-06 53.5 46 65.2
Dinv02656 Davidia involucrata HOM05D000503 ORTHO05D000361 8.9e-06 53.1 50 56.0
Duzib068G0544 Durio zibethinus HOM05D000503 ORTHO05D000361 8.9e-06 53.1 40 67.5
FAN06G1891 Fragaria x ananassa HOM05D000503 ORTHO05D000361 8.9e-06 53.1 48 62.5
FAN16G1314 Fragaria x ananassa HOM05D000503 ORTHO05D000361 8.9e-06 53.1 48 62.5
Glyma.17G093900 Glycine max HOM05D000503 ORTHO05D000361 8.9e-06 53.1 51 58.8
RcHm_v2.0_Chr7g0179851 Rosa chinensis HOM05D000503 ORTHO05D000361 8.9e-06 53.1 48 60.4
Sabra15G0094100 Salix brachista HOM05D000503 ORTHO05D000361 8.9e-06 53.1 54 53.7


User provided reference genes

Program Settings