Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 1.1e-260 902.9 508 100.0
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 4.5e-169 598.6 560 66.6
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 2.3e-165 586.3 511 72.0
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 2.2e-163 579.7 515 67.0
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 5.9e-161 571.6 512 66.0
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 3.8e-160 568.9 513 66.1
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 5.9e-145 518.5 480 65.4
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 2.6e-140 503.1 392 68.1
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 2.3e-133 479.9 396 69.7
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 6.2e-126 455.3 393 69.0
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 9.3e-114 414.8 504 52.6
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 2.1e-113 413.7 504 52.4
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 1.5e-111 407.5 505 52.3
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 2.8e-110 403.3 508 51.8
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 1.3e-107 394.4 414 51.9
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 6.4e-107 392.1 521 48.4
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 5.1e-104 382.5 501 49.9
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 6.6e-104 382.1 507 50.5
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 8.1e-102 375.2 511 48.1
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 2.4e-101 373.6 501 49.7
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 3.1e-101 373.2 498 48.8
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 4.0e-101 372.9 500 50.0
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 6.9e-101 372.1 503 48.5
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 6.9e-101 372.1 500 49.6
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 1.2e-100 371.3 503 48.5
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 1.5e-100 370.9 507 48.3
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 2.6e-100 370.2 507 49.3
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 3.8e-99 366.3 498 48.2
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 5.4e-98 362.5 509 48.7
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 9.3e-98 361.7 498 48.4
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 6.0e-97 359.0 509 44.0
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 5.1e-96 355.9 472 45.6
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 1.9e-95 354.0 507 47.1
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 2.5e-95 353.6 498 47.2
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 5.6e-95 352.4 507 47.7
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 1.6e-94 350.9 507 46.4
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 2.8e-94 350.1 513 47.2
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 2.4e-93 347.1 517 46.6
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 3.1e-93 346.7 500 47.6
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 3.1e-93 346.7 410 48.8
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 5.3e-93 345.9 504 47.8
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 1.2e-92 344.7 435 46.9
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 3.8e-91 339.7 513 42.5
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 4.9e-91 339.3 504 45.4
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 6.5e-91 339.0 509 46.2
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 8.4e-91 338.6 521 46.1
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 3.2e-90 336.7 499 46.7
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 1.2e-89 334.7 512 48.2
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 2.3e-88 330.5 503 46.3
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 3.9e-88 329.7 506 46.4
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 5.3e-85 319.3 499 41.1
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 9.0e-85 318.5 557 39.9
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 4.2e-82 309.7 406 45.6
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 5.5e-82 309.3 574 40.8
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 9.3e-82 308.5 505 45.3
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 2.3e-80 303.9 379 46.2
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 3.9e-80 303.1 505 42.8
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 3.9e-80 303.1 517 42.7
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 5.1e-80 302.8 421 42.8
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 4.8e-78 296.2 515 43.3
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 2.0e-76 290.8 435 42.1
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 8.5e-75 285.4 409 42.5
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 2.5e-74 283.9 567 38.6
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 3.2e-74 283.5 264 56.1
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 4.2e-74 283.1 476 44.3
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 7.2e-74 282.3 583 39.1
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 4.6e-73 279.6 324 45.4
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 1.0e-72 278.5 506 47.4
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 1.4e-72 278.1 513 43.7
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 3.9e-72 276.6 570 38.9
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 1.1e-71 275.0 499 47.3
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 2.5e-71 273.9 518 40.7
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 4.1e-69 266.5 542 43.7
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 2.6e-68 263.8 530 40.6
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 5.9e-68 262.7 534 40.8
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 5.0e-67 259.6 415 40.2
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 5.0e-67 259.6 274 51.8
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 3.6e-65 253.4 411 39.9
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 5.1e-64 249.6 509 39.7
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 5.1e-64 249.6 509 39.7
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 8.8e-64 248.8 371 41.8
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.5e-63 248.1 494 39.5
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 3.7e-62 243.4 211 65.9
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 9.1e-61 238.8 494 34.6
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 3.5e-60 236.9 387 38.8
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 5.9e-60 236.1 383 44.9
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 8.5e-59 232.3 264 50.8
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 3.6e-49 200.3 500 36.2
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 3.6e-49 200.3 343 44.9
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.0e-48 198.7 322 40.1
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.3e-46 191.8 505 36.0
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 2.4e-45 187.6 253 44.7
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 4.5e-44 183.3 442 30.5
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 2.5e-42 177.6 470 28.5
CARHR242710 Cardamine hirsuta HOM05D007081 ORTHO05D008834 2.5e-42 177.6 178 52.8
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 2.1e-41 174.5 324 45.7
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 2.4e-37 161.0 279 36.9
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 2.9e-35 154.1 302 35.1
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.9e-34 151.4 357 38.7
Cpa.g.sc35.79 Carica papaya HOM05D007081 ORTHO05D008834 5.7e-31 139.8 113 64.6
arahy.Tifrunner.gnm1.ann1.JE9H0F Arachis hypogaea HOM05D007081 ORTHO05D008834 2.4e-29 134.4 310 32.6
SGA_v2.0_scaffold90G27873 Striga asiatica HOM05D007081 ORTHO05D008834 4.0e-24 117.1 147 47.6
CSS0048681 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 9.2e-21 105.9 65 73.8
CBR_g4092 Chara braunii HOM05D007081 ORTHO05D000048 9.2e-21 105.9 399 26.8
HPP92_000304 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.2e-20 105.5 97 55.7
Oeu015893.1 Olea europaea HOM05D007081 ORTHO05D008834 1.4e-16 92.0 173 34.1
CSS0035417 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 6.8e-16 89.7 65 66.2
Nitab4.5_0022301g0010 Nicotiana tabacum HOM05D007081 ORTHO05D008834 4.4e-15 87.0 201 44.8
CAN.G12.29 Capsicum annuum HOM05D001989 ORTHO05D000346 3.0e-11 74.3 149 36.2
SEGI_21151 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 9.5e-10 69.3 84 44.0
DCAR_016228 Daucus carota HOM05D005384 ORTHO05D006477 2.2e-06 58.2 142 31.7


User provided reference genes

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