Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr00c21g0405211 Lupinus albus HOM05D007099 ORTHO05D009081 8.1e-28 126.3 63 100.0
Lalb_Chr00c21g0405401 Lupinus albus HOM05D007099 ORTHO05D009081 8.1e-28 126.3 63 100.0
Lalb_Chr00c24g0407161 Lupinus albus HOM05D007099 ORTHO05D009081 8.1e-28 126.3 63 100.0
Lalb_Chr11g0070131 Lupinus albus HOM05D007099 ORTHO05D009081 8.1e-28 126.3 63 100.0
Lalb_Chr11g0070211 Lupinus albus HOM05D007099 ORTHO05D009081 8.1e-28 126.3 63 100.0
TPR.G27292 Trifolium pratense HOM05D007099 ORTHO05D009081 3.1e-27 124.4 63 98.4
VMungo0647G1684 Vigna mungo HOM05D007099 ORTHO05D009081 9.0e-27 122.9 63 96.8
Nn1g10177 Nelumbo nucifera HOM05D007099 ORTHO05D009081 2.0e-26 121.7 63 96.8
Lj2P1221T100 Lonicera japonica HOM05D007099 ORTHO05D009081 1.0e-25 119.4 63 95.2
Aqoxy12s037 Aquilegia oxysepala HOM05D007099 ORTHO05D009081 2.2e-25 118.2 63 93.7
Glyma.05G091932 Glycine max HOM05D007099 ORTHO05D009081 3.8e-25 117.5 63 93.7
Solyc00g500363.1 Solanum lycopersicum HOM05D007099 ORTHO05D009081 1.9e-24 115.2 63 92.1
THA.LOC104825605 Tarenaya hassleriana HOM05D007099 ORTHO05D009081 1.2e-23 112.5 63 92.1
COL.COLO4_06718 Corchorus olitorius HOM05D007099 ORTHO05D009081 1.6e-23 112.1 63 87.3
Solyc09g050030.1 Solanum lycopersicum HOM05D007099 ORTHO05D009081 2.1e-23 111.7 63 88.9
Thhalv10001274m.g Eutrema salsugineum HOM05D002864 ORTHO05D008485 3.0e-22 107.8 63 90.5
ATR0573G002 Amborella trichopoda HOM05D007099 ORTHO05D009081 5.7e-21 103.6 63 84.1
Rhsim11G0096700 Rhododendron simsii HOM05D007099 ORTHO05D009081 5.7e-21 103.6 62 79.0
AL4G30490 Arabidopsis lyrata HOM05D007099 ORTHO05D009081 9.6e-21 102.8 63 79.4
AT2G34520 Arabidopsis thaliana HOM05D007099 ORTHO05D009081 2.1e-20 101.7 63 79.4
arahy.Tifrunner.gnm1.ann1.5L8EUV Arachis hypogaea HOM05D007099 ORTHO05D009081 2.1e-20 101.7 52 98.1
Carub.0004s1619 Capsella rubella HOM05D007099 ORTHO05D009081 3.7e-20 100.9 63 77.8
CARHR128610 Cardamine hirsuta HOM05D007099 ORTHO05D009081 3.7e-20 100.9 63 74.6
arahy.Tifrunner.gnm1.ann1.BT1F12 Arachis hypogaea HOM05D007099 ORTHO05D009081 6.3e-20 100.1 54 96.3
CAN.G371.64 Capsicum annuum HOM05D007099 ORTHO05D009081 6.3e-20 100.1 63 76.2
Nitab4.5_0000068g0330 Nicotiana tabacum HOM05D007099 ORTHO05D009081 1.1e-19 99.4 62 74.2
Nitab4.5_0012613g0010 Nicotiana tabacum HOM05D007099 ORTHO05D009081 1.1e-19 99.4 62 74.2
Aa31LG1G28210 Aethionema arabicum HOM05D007099 ORTHO05D009081 1.8e-19 98.6 63 79.4
ClCG08G008070 Citrullus lanatus HOM05D007099 ORTHO05D009081 2.4e-19 98.2 63 73.0
Cc11_g04750 Coffea canephora HOM05D007099 ORTHO05D009081 4.1e-19 97.4 63 73.0
Solyc04g079380.1 Solanum lycopersicum HOM05D007099 ORTHO05D009081 4.1e-19 97.4 63 73.0
Sopen04g032990 Solanum pennellii HOM05D007099 ORTHO05D009081 4.1e-19 97.4 63 73.0
PGSC0003DMG400007997 Solanum tuberosum HOM05D007099 ORTHO05D009081 4.1e-19 97.4 63 73.0
BcaB02g09535 Brassica carinata HOM05D007099 ORTHO05D009081 5.3e-19 97.1 63 74.6
BcaB06g28779 Brassica carinata HOM05D007099 ORTHO05D009081 5.3e-19 97.1 63 74.6
A04p26440 Brassica napus HOM05D007099 ORTHO05D009081 5.3e-19 97.1 63 74.6
A05p11160 Brassica napus HOM05D007099 ORTHO05D009081 5.3e-19 97.1 63 74.6
C04p63850 Brassica napus HOM05D007099 ORTHO05D009081 5.3e-19 97.1 63 74.6
BolC4t27852H Brassica oleracea HOM05D007099 ORTHO05D009081 5.3e-19 97.1 63 74.6
BraA04t18148Z Brassica rapa HOM05D007099 ORTHO05D009081 5.3e-19 97.1 63 74.6
BraA05t20062Z Brassica rapa HOM05D007099 ORTHO05D009081 5.3e-19 97.1 63 74.6
Thhalv10017324m.g Eutrema salsugineum HOM05D007099 ORTHO05D009081 5.3e-19 97.1 63 74.6
Sp4g16780 Schrenkiella parvula HOM05D007099 ORTHO05D009081 5.3e-19 97.1 63 74.6
Manes.15G073400 Manihot esculenta HOM05D007099 ORTHO05D009081 9.0e-19 96.3 63 73.0
EL10Ac3g05283 Beta vulgaris HOM05D007099 ORTHO05D009081 1.2e-18 95.9 63 73.0
BcaC02g11514 Brassica carinata HOM05D007099 ORTHO05D009081 1.5e-18 95.5 63 73.0
C04p14510 Brassica napus HOM05D007099 ORTHO05D009081 1.5e-18 95.5 63 73.0
BolC4t23034H Brassica oleracea HOM05D007099 ORTHO05D009081 1.5e-18 95.5 63 73.0
CiPaw.13G036200 Carya illinoinensis HOM05D007099 ORTHO05D009081 1.5e-18 95.5 63 71.4
arahy.Tifrunner.gnm1.ann1.N1QJ6Q Arachis hypogaea HOM05D007099 ORTHO05D009081 5.9e-18 93.6 54 87.0
MELO3C019879.2 Cucumis melo HOM05D007099 ORTHO05D009081 5.9e-18 93.6 63 69.8
Zm00001eb261270 Zea mays HOM05D002252 ORTHO05D002451 5.9e-18 93.6 63 71.4
Atru.chr1.3070 Acer truncatum HOM05D007099 ORTHO05D009081 7.6e-18 93.2 63 73.0
Atru.chr3.1047 Acer truncatum HOM05D007099 ORTHO05D009081 7.6e-18 93.2 63 73.0
RcHm_v2.0_Chr1g0333591 Rosa chinensis HOM05D007099 ORTHO05D009081 1.0e-17 92.8 63 71.4
Cfa011223 Carpinus fangiana HOM05D007099 ORTHO05D009081 1.3e-17 92.4 62 71.0
Cfa011224 Carpinus fangiana HOM05D007099 ORTHO05D009081 1.3e-17 92.4 62 71.0
AUR62006089 Chenopodium quinoa HOM05D007099 ORTHO05D009081 1.3e-17 92.4 63 69.8
AUR62019404 Chenopodium quinoa HOM05D007099 ORTHO05D009081 1.3e-17 92.4 63 69.8
Haze_02608 Corylus avellana HOM05D007099 ORTHO05D009081 1.3e-17 92.4 62 71.0
Hund03588 Selenicereus undatus HOM05D007099 ORTHO05D009081 1.3e-17 92.4 63 74.6
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 1.7e-17 92.0 62 75.8
QL04p041158 Quercus lobata HOM05D007099 ORTHO05D009081 1.7e-17 92.0 62 69.4
Hund07474 Selenicereus undatus HOM05D007099 ORTHO05D009081 1.7e-17 92.0 63 71.4
RcHm_v2.0_Chr5g0056441 Rosa chinensis HOM05D007099 ORTHO05D009081 2.2e-17 91.7 63 69.8
Sed0026927 Sechium edule HOM05D007099 ORTHO05D009081 2.9e-17 91.3 63 68.3
MD03G1252400 Malus domestica HOM05D007099 ORTHO05D009081 3.8e-17 90.9 63 69.8
MD07G1070600 Malus domestica HOM05D007099 ORTHO05D009081 3.8e-17 90.9 63 69.8
MD07G1069700 Malus domestica HOM05D007099 ORTHO05D009081 5.0e-17 90.5 62 69.4
Prupe.2G087000 Prunus persica HOM05D007099 ORTHO05D009081 5.0e-17 90.5 63 71.4
Prupe.2G087700 Prunus persica HOM05D007099 ORTHO05D009081 5.0e-17 90.5 63 71.4
Prupe.8G094900 Prunus persica HOM05D007099 ORTHO05D009081 5.0e-17 90.5 63 71.4
CsaV3_2G032930 Cucumis sativus L. HOM05D007099 ORTHO05D009081 6.5e-17 90.1 63 68.3
Potri.001G424950 Populus trichocarpa HOM05D007099 ORTHO05D009081 6.5e-17 90.1 63 68.3
Sabra16G0287600 Salix brachista HOM05D007099 ORTHO05D009081 6.5e-17 90.1 63 68.3
FvH4_7g06080 Fragaria vesca HOM05D007099 ORTHO05D009081 8.5e-17 89.7 63 66.7
FAN06G3861 Fragaria x ananassa HOM05D007099 ORTHO05D009081 1.1e-16 89.4 62 66.1
FAN10G1031 Fragaria x ananassa HOM05D007099 ORTHO05D009081 1.1e-16 89.4 62 66.1
QL10p027581 Quercus lobata HOM05D007099 ORTHO05D009081 1.1e-16 89.4 62 67.7
PSO541G4216 Papaver somniferum HOM05D007099 ORTHO05D009081 1.4e-16 89.0 63 68.3
SalBow8G2603 Salvia bowleyana HOM05D007099 ORTHO05D009081 1.4e-16 89.0 63 71.4
FAN16G1526 Fragaria x ananassa HOM05D007099 ORTHO05D009081 1.9e-16 88.6 62 66.1
Mapoly0991s0001 Marchantia polymorpha HOM05D007099 ORTHO05D009081 2.5e-16 88.2 57 77.2
Ah.07g205590 Amaranthus hybridus HOM05D007099 ORTHO05D009081 3.2e-16 87.8 61 68.9
PSO675G8234 Papaver somniferum HOM05D007099 ORTHO05D009081 3.2e-16 87.8 63 66.7
CANSAT56G2898 Cannabis sativa HOM05D007099 ORTHO05D009081 5.5e-16 87.0 63 65.1
Ciclev10022860m.g Citrus clementina HOM05D007099 ORTHO05D009081 5.5e-16 87.0 63 66.7
SHI18971 Sapria himalayana HOM05D007099 ORTHO05D009081 9.3e-16 86.3 63 65.1
PSO541G5582 Papaver somniferum HOM05D007099 ORTHO05D009081 1.2e-15 85.9 63 65.1
Atru.chr6.1811 Acer truncatum HOM05D002864 ORTHO05D008485 1.6e-15 85.5 48 91.7
Gorai.001G161900 Gossypium raimondii HOM05D007099 ORTHO05D009081 1.6e-15 85.5 45 95.6
Peaxi162Scf01092g00115 Petunia axillaris HOM05D007099 ORTHO05D009081 1.6e-15 85.5 54 77.8
FAN12G2091 Fragaria x ananassa HOM05D007099 ORTHO05D009081 2.1e-15 85.1 61 65.6
Lsat_1_v5_gn_9_15021 Lactuca sativa HOM05D007099 ORTHO05D009081 2.1e-15 85.1 63 66.7
HanXRQChr10g0308131 Helianthus annuus HOM05D007099 ORTHO05D009081 2.7e-15 84.7 63 65.1
DCAR_014524 Daucus carota HOM05D007099 ORTHO05D009081 1.8e-14 82.0 63 61.9
PSO675G5170 Papaver somniferum HOM05D007099 ORTHO05D009081 3.9e-14 80.9 63 65.1
Phvul.011G109300 Phaseolus vulgaris HOM05D007099 ORTHO05D009081 3.9e-14 80.9 63 69.8
BcaB02g09534 Brassica carinata HOM05D007099 ORTHO05D009081 4.3e-13 77.4 52 71.2
ECA234G1703 Erigeron canadensis HOM05D007099 ORTHO05D009081 1.3e-12 75.9 63 57.1
Rhsim10G0009600 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.3e-12 75.9 50 76.0
Gohir.A01G126800 Gossypium hirsutum HOM05D007099 ORTHO05D009081 2.4e-11 71.6 38 92.1
Pp3c2_23460 Physcomitrium patens HOM05D007099 ORTHO05D009081 2.4e-11 71.6 53 66.0
SMO134G0293 Selaginella moellendorffii HOM05D007099 ORTHO05D009081 6.9e-11 70.1 56 62.5
Peaxi162Scf36888g00001 Petunia axillaris HOM05D002864 ORTHO05D008485 1.0e-09 66.2 39 84.6
Peaxi162Scf44104g00001 Petunia axillaris HOM05D007099 ORTHO05D009081 1.0e-09 66.2 39 84.6
FvH4_3g30490 Fragaria vesca HOM05D007099 ORTHO05D009081 1.1e-08 62.8 46 65.2
FAN11G0918 Fragaria x ananassa HOM05D007099 ORTHO05D009081 1.1e-08 62.8 46 65.2
Nitab4.5_0000120g0100 Nicotiana tabacum HOM05D002864 ORTHO05D008485 1.4e-08 62.4 36 86.1
ClCG01G010070 Citrullus lanatus HOM05D007099 ORTHO05D009081 9.4e-08 59.7 46 65.2
Cre17.g726300 Chlamydomonas reinhardtii HOM05D007099 ORTHO05D009081 4.6e-07 57.4 54 51.9
Medtr3g035610 Medicago truncatula HOM05D000388 ORTHO05D009843 1.4e-06 55.8 60 46.7


User provided reference genes

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