Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0070061 Lupinus albus HOM05D004909 ORTHO05D009316 0.0e+00 1111.7 544 100.0
Aqoxy2G02244 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 3.2e-221 771.9 518 71.0
Aqoxy3G01127 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 3.2e-221 771.9 518 71.0
PGR044G0991 Punica granatum HOM05D004909 ORTHO05D009316 1.0e-203 713.8 500 69.4
Lalb_Chr00c21g0405621 Lupinus albus HOM05D004909 ORTHO05D009316 2.0e-167 593.2 284 99.6
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 1.0e-166 590.9 531 54.2
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 9.4e-165 584.3 507 54.4
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 8.0e-164 581.3 545 52.1
DCAR_032462 Daucus carota HOM05D004909 ORTHO05D009316 5.5e-157 558.5 524 51.7
EL10Ac7g16726 Beta vulgaris HOM05D004909 ORTHO05D009316 1.4e-152 543.9 550 48.9
AUR62042355 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.2e-151 540.8 489 52.4
AUR62043789 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.2e-151 540.8 489 52.4
AUR62043900 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.2e-151 540.8 489 52.4
vmacro17405 Vaccinium macrocarpon HOM05D004909 ORTHO05D009316 2.8e-140 503.1 398 58.3
SHI44822 Sapria himalayana HOM05D004909 ORTHO05D009316 2.1e-135 486.9 383 59.5
AUR62026823 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.1e-134 482.3 468 49.8
SHI44820 Sapria himalayana HOM05D004909 ORTHO05D009316 3.6e-132 476.1 409 55.3
Glyma.15G187700 Glycine max HOM05D004909 ORTHO05D009316 4.7e-132 475.7 396 56.8
EL10Ac1g02201 Beta vulgaris HOM05D004909 ORTHO05D009316 3.3e-125 453.0 508 45.5
Lj2A1227T106 Lonicera japonica HOM05D004909 ORTHO05D009316 3.2e-120 436.4 383 53.3
SHI35584 Sapria himalayana HOM05D004909 ORTHO05D009316 4.2e-120 436.0 508 45.3
THA.LOC109116692 Tarenaya hassleriana HOM05D004909 ORTHO05D009316 3.6e-116 422.9 336 57.4
CsaV3_UNG209050 Cucumis sativus L. HOM05D004909 ORTHO05D009316 4.4e-114 416.0 432 50.9
Cc00_g01790 Coffea canephora HOM05D004909 ORTHO05D009316 1.7e-113 414.1 351 54.1
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 3.9e-110 402.9 486 44.7
AUR62037530 Chenopodium quinoa HOM05D004909 ORTHO05D009316 9.6e-109 398.3 489 42.7
Sed0025836 Sechium edule HOM05D004909 ORTHO05D009316 3.6e-108 396.4 539 39.0
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 1.5e-106 391.0 522 39.1
AUR62043915 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.7e-103 380.2 411 47.4
HPP92_026900 Vanilla planifolia HOM05D004909 ORTHO05D009316 7.6e-98 362.1 314 52.2
EL10Ac1g01434 Beta vulgaris HOM05D004909 ORTHO05D009316 4.9e-97 359.4 438 43.4
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.4e-96 357.8 327 52.6
AUR62029835 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.2e-95 354.8 346 50.3
CAN.G1542.8 Capsicum annuum HOM05D004909 ORTHO05D009316 1.4e-78 298.1 282 49.6
Nitab4.5_0001681g0080 Nicotiana tabacum HOM05D004909 ORTHO05D009316 2.2e-73 280.8 269 49.8
CAN.G505.15 Capsicum annuum HOM05D004909 ORTHO05D009316 5.7e-69 266.2 322 45.7
Lj2P1224T90 Lonicera japonica HOM05D004909 ORTHO05D009316 5.7e-69 266.2 234 53.8
Nitab4.5_0000580g0100 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.3e-68 265.0 259 48.6
Sc15g0003200 Simmondsia chinensis HOM05D004909 ORTHO05D009316 1.0e-62 245.4 170 60.6
Nitab4.5_0004300g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.5e-61 241.5 302 42.4
Lalb_Chr00c21g0405611 Lupinus albus HOM05D004909 ORTHO05D009316 3.5e-58 230.3 116 98.3
EL10Ac7g17805 Beta vulgaris HOM05D004909 ORTHO05D009316 3.4e-53 213.8 313 38.0
CAN.G505.10 Capsicum annuum HOM05D004909 ORTHO05D009316 1.3e-52 211.8 285 40.0
Peaxi162Scf00651g00626 Petunia axillaris HOM05D004909 ORTHO05D009316 6.1e-47 193.0 268 39.6
CAN.G14.29 Capsicum annuum HOM05D004909 ORTHO05D009316 3.7e-44 183.7 256 40.6
AUR62038224 Chenopodium quinoa HOM05D000613 ORTHO05D000446 3.7e-44 183.7 133 60.2
arahy.Tifrunner.gnm1.ann1.HS2KB4 Arachis hypogaea HOM05D004909 ORTHO05D009316 1.3e-41 175.3 147 60.5
AUR62042356 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.4e-38 165.2 240 39.2
AUR62030242 Chenopodium quinoa HOM05D004909 ORTHO05D009316 4.4e-37 160.2 217 43.8
Solyc03g013470.1 Solanum lycopersicum HOM05D004909 ORTHO05D009316 2.2e-36 157.9 426 28.2
EL10Ac6g15711 Beta vulgaris HOM05D004909 ORTHO05D009316 7.0e-35 152.9 113 58.4
Peaxi162Scf00456g00034 Petunia axillaris HOM05D004909 ORTHO05D009316 1.3e-33 148.7 470 25.5
AUR62043790 Chenopodium quinoa HOM05D004909 ORTHO05D009316 3.3e-32 144.1 102 60.8
AUR62043901 Chenopodium quinoa HOM05D004909 ORTHO05D009316 3.3e-32 144.1 102 60.8
Sc13g0007740 Simmondsia chinensis HOM05D004909 ORTHO05D009316 9.5e-32 142.5 115 55.7
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 1.8e-30 138.3 451 26.8
Nitab4.5_0010033g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009316 4.4e-29 133.7 124 54.0
CAN.G7.24 Capsicum annuum HOM05D004909 ORTHO05D009316 1.1e-27 129.0 136 44.9
Sc02g0004080 Simmondsia chinensis HOM05D004909 ORTHO05D009316 6.0e-26 123.2 91 58.2
CAN.G733.11 Capsicum annuum HOM05D004909 ORTHO05D009316 3.3e-24 117.5 100 55.0
CAN.G26.10 Capsicum annuum HOM05D004909 ORTHO05D009316 2.1e-23 114.8 102 52.9
CAN.G100.53 Capsicum annuum HOM05D004909 ORTHO05D009316 2.8e-23 114.4 163 41.1
COL.COLO4_04384 Corchorus olitorius HOM05D004909 ORTHO05D009316 3.6e-23 114.0 84 58.3
EL10Ac7g16568 Beta vulgaris HOM05D004909 ORTHO05D009316 2.6e-21 107.8 96 49.0
EL10As18g24157 Beta vulgaris HOM05D004909 ORTHO05D009316 2.6e-21 107.8 96 49.0
arahy.Tifrunner.gnm1.ann1.MAXI5J Arachis hypogaea HOM05D004909 ORTHO05D009316 6.4e-20 103.2 63 71.4
SGA_v2.0_scaffold328G48796 Striga asiatica HOM05D004909 ORTHO05D009316 1.4e-19 102.1 59 67.8
Nitab4.5_0000351g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.7e-17 95.1 78 56.4
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 2.1e-15 88.2 79 48.1
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 1.8e-14 85.1 81 56.8
Nitab4.5_0001526g0140 Nicotiana tabacum HOM05D004909 ORTHO05D009316 4.0e-14 84.0 70 55.7
HPP92_021361 Vanilla planifolia HOM05D004909 ORTHO05D009316 1.5e-13 82.0 58 55.2
Oeu013314.1 Olea europaea HOM05D000129 ORTHO05D000144 1.3e-12 79.0 55 63.6
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 6.4e-12 76.6 90 42.2
TWI14G0838 Tripterygium wilfordii HOM05D004909 ORTHO05D009316 1.1e-11 75.9 62 56.5
Peaxi162Scf00625g00034 Petunia axillaris HOM05D002660 ORTHO05D003902 4.1e-11 73.9 95 38.9
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 2.4e-06 58.2 58 46.6


User provided reference genes

Program Settings