Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0069821 Lupinus albus HOM05D000048 ORTHO05D013117 1.5e-29 132.1 64 100.0
Lalb_Chr01g0014871 Lupinus albus HOM05D000048 ORTHO05D013117 1.3e-17 92.4 54 88.9
Lalb_Chr25g0286281 Lupinus albus HOM05D000048 ORTHO05D002390 7.5e-13 76.6 52 76.9
Psat5g244160 Pisum sativum HOM05D000048 ORTHO05D002390 3.5e-10 67.8 49 71.4
Ca_03510_v3 Cicer arietinum L. HOM05D000048 ORTHO05D002390 4.6e-10 67.4 49 71.4
Phvul.005G073400 Phaseolus vulgaris HOM05D000048 ORTHO05D002390 4.6e-10 67.4 49 71.4
arahy.Tifrunner.gnm1.ann1.3YRJ0Q Arachis hypogaea HOM05D000048 ORTHO05D002390 6.0e-10 67.0 49 71.4
arahy.Tifrunner.gnm1.ann1.IK0U2W Arachis hypogaea HOM05D000048 ORTHO05D002390 6.0e-10 67.0 49 71.4
VMungo1080G1432 Vigna mungo HOM05D000048 ORTHO05D002390 1.0e-09 66.2 49 69.4
Medtr2g079020 Medicago truncatula HOM05D000048 ORTHO05D002390 1.7e-09 65.5 49 69.4
Phvul.005G073300 Phaseolus vulgaris HOM05D000048 ORTHO05D002390 1.7e-09 65.5 49 69.4
Psat5g244080 Pisum sativum HOM05D000048 ORTHO05D002390 3.9e-09 64.3 49 67.3
Glyma.13G275400 Glycine max HOM05D000048 ORTHO05D002390 8.6e-09 63.2 49 67.3
TPR.G7968 Trifolium pratense HOM05D000048 ORTHO05D002390 8.6e-09 63.2 48 68.8
Medtr2g078930 Medicago truncatula HOM05D000048 ORTHO05D002390 1.1e-08 62.8 48 68.8
Medtr2g078960 Medicago truncatula HOM05D000048 ORTHO05D002390 1.1e-08 62.8 48 68.8
Psat5g244120 Pisum sativum HOM05D000048 ORTHO05D002390 1.5e-08 62.4 49 65.3
Glyma.13G275500 Glycine max HOM05D000048 ORTHO05D002390 1.9e-08 62.0 48 68.8
arahy.Tifrunner.gnm1.ann1.EN8HK1 Arachis hypogaea HOM05D000048 ORTHO05D002390 4.3e-08 60.8 49 67.3
Lj3g0027694 Lotus japonicus HOM05D000048 ORTHO05D002390 4.3e-08 60.8 48 66.7
Medtr2g078970 Medicago truncatula HOM05D000048 ORTHO05D002390 4.3e-08 60.8 49 63.3
Cfa020570 Carpinus fangiana HOM05D000048 ORTHO05D002390 9.5e-08 59.7 48 66.7
Haze_09466 Corylus avellana HOM05D000048 ORTHO05D002390 9.5e-08 59.7 48 66.7
Potri.011G117100 Populus trichocarpa HOM05D000048 ORTHO05D002390 9.5e-08 59.7 49 65.3
Potri.011G117300 Populus trichocarpa HOM05D000048 ORTHO05D002390 9.5e-08 59.7 49 65.3
arahy.Tifrunner.gnm1.ann1.PBN9WF Arachis hypogaea HOM05D000048 ORTHO05D002390 2.1e-07 58.5 48 68.8
CiPaw.12G119300 Carya illinoinensis HOM05D000048 ORTHO05D002390 2.8e-07 58.2 51 62.7
FvH4_3g19700 Fragaria vesca HOM05D000048 ORTHO05D002390 2.8e-07 58.2 49 63.3
FAN11G3686 Fragaria x ananassa HOM05D000048 ORTHO05D002390 2.8e-07 58.2 49 63.3
FAN21G2084 Fragaria x ananassa HOM05D000048 ORTHO05D002390 2.8e-07 58.2 49 63.3
Sabra11G0102600 Salix brachista HOM05D000048 ORTHO05D002390 2.8e-07 58.2 49 63.3
AUR62039189 Chenopodium quinoa HOM05D000048 ORTHO05D002390 3.6e-07 57.8 48 66.7
RcHm_v2.0_Chr5g0033011 Rosa chinensis HOM05D000048 ORTHO05D002390 3.6e-07 57.8 48 64.6
MD03G1230300 Malus domestica HOM05D000048 ORTHO05D002390 4.7e-07 57.4 49 61.2
Potri.011G117400 Populus trichocarpa HOM05D000048 ORTHO05D002390 4.7e-07 57.4 48 64.6
HPP92_000832 Vanilla planifolia HOM05D000048 ORTHO05D002390 4.7e-07 57.4 48 64.6
Gohir.A13G146500 Gossypium hirsutum HOM05D000048 ORTHO05D002390 8.1e-07 56.6 48 64.6
Gohir.D05G351300 Gossypium hirsutum HOM05D000048 ORTHO05D002390 8.1e-07 56.6 48 62.5
Gohir.D13G151500 Gossypium hirsutum HOM05D000048 ORTHO05D002390 8.1e-07 56.6 48 64.6
Gorai.009G381600 Gossypium raimondii HOM05D000048 ORTHO05D002390 8.1e-07 56.6 48 62.5
Gorai.013G170200 Gossypium raimondii HOM05D000048 ORTHO05D002390 8.1e-07 56.6 48 64.6
Manes.15G088100 Manihot esculenta HOM05D000048 ORTHO05D002390 8.1e-07 56.6 48 64.6
AUR62019441 Chenopodium quinoa HOM05D000048 ORTHO05D002390 1.1e-06 56.2 48 64.6
COL.COLO4_27207 Corchorus olitorius HOM05D000048 ORTHO05D002390 1.1e-06 56.2 49 61.2
MD11G1251300 Malus domestica HOM05D000048 ORTHO05D002390 1.1e-06 56.2 48 62.5
CiPaw.11G170800 Carya illinoinensis HOM05D000048 ORTHO05D002390 1.4e-06 55.8 45 66.7
FAN25G3294 Fragaria x ananassa HOM05D000048 ORTHO05D002390 1.4e-06 55.8 49 61.2
MD11G1251500 Malus domestica HOM05D000048 ORTHO05D013117 1.4e-06 55.8 49 59.2
AUR62008811 Chenopodium quinoa HOM05D000048 ORTHO05D013117 1.8e-06 55.5 48 62.5
COL.COLO4_27200 Corchorus olitorius HOM05D000048 ORTHO05D013117 1.8e-06 55.5 49 57.1
COL.COLO4_27202 Corchorus olitorius HOM05D007567 ORTHO05D000126 1.8e-06 55.5 49 57.1
Haze_09442 Corylus avellana HOM05D000048 ORTHO05D002390 1.8e-06 55.5 50 60.0
Gorai.009G382800 Gossypium raimondii HOM05D000048 ORTHO05D002390 1.8e-06 55.5 48 62.5
Rhsim06G0200600 Rhododendron simsii HOM05D000048 ORTHO05D002390 1.8e-06 55.5 49 57.1
Atru.chr2.2719 Acer truncatum HOM05D000048 ORTHO05D002390 2.3e-06 55.1 49 61.2
Atru.chr2.2723 Acer truncatum HOM05D000048 ORTHO05D002390 2.3e-06 55.1 49 61.2
EL10Ac7g17704 Beta vulgaris HOM05D000048 ORTHO05D002390 2.3e-06 55.1 48 62.5
Cpa.g.sc80.81 Carica papaya HOM05D000048 ORTHO05D002390 2.3e-06 55.1 48 62.5
Duzib170G0348 Durio zibethinus HOM05D000048 ORTHO05D002390 2.3e-06 55.1 49 61.2
Gohir.A04G032800 Gossypium hirsutum HOM05D000048 ORTHO05D002390 2.3e-06 55.1 48 60.4
QL08p022306 Quercus lobata HOM05D000048 ORTHO05D002390 2.3e-06 55.1 50 62.0
EL10Ac4g08209 Beta vulgaris HOM05D000048 ORTHO05D002390 3.1e-06 54.7 48 64.6
Gorai.009G381900 Gossypium raimondii HOM05D000048 ORTHO05D002390 3.1e-06 54.7 48 60.4
Prupe.4G178900 Prunus persica HOM05D000048 ORTHO05D002390 3.1e-06 54.7 48 62.5
Hund22859 Selenicereus undatus HOM05D000048 ORTHO05D002390 3.1e-06 54.7 49 57.1
Thecc.07G094200 Theobroma cacao HOM05D000048 ORTHO05D002390 3.1e-06 54.7 51 56.9
EL10Ac7g17703 Beta vulgaris HOM05D000048 ORTHO05D002390 4.0e-06 54.3 48 60.4
AUR62025427 Chenopodium quinoa HOM05D000048 ORTHO05D002390 4.0e-06 54.3 48 60.4
MBI18_g37775_MAGBIO Magnolia biondii HOM05D000048 ORTHO05D002390 4.0e-06 54.3 49 57.1
Sc03g0010110 Simmondsia chinensis HOM05D000048 ORTHO05D002390 4.0e-06 54.3 49 57.1
TAR627G1164 Trochodendron aralioides HOM05D000048 ORTHO05D002390 4.0e-06 54.3 48 60.4
EL10Ac7g17702 Beta vulgaris HOM05D000048 ORTHO05D002390 5.2e-06 53.9 48 60.4
CANSAT56G2636 Cannabis sativa HOM05D000048 ORTHO05D002390 5.2e-06 53.9 48 62.5
ClCG11G017980 Citrullus lanatus HOM05D000048 ORTHO05D002390 5.2e-06 53.9 48 60.4
Ciclev10008387m.g Citrus clementina HOM05D000048 ORTHO05D002390 5.2e-06 53.9 48 62.5
Duzib268G0101 Durio zibethinus HOM05D000048 ORTHO05D002390 5.2e-06 53.9 45 62.2
Duzib268G1347 Durio zibethinus HOM05D000048 ORTHO05D002390 5.2e-06 53.9 48 58.3
FvH4_3g19720 Fragaria vesca HOM05D000048 ORTHO05D002390 5.2e-06 53.9 48 64.6
Thecc.07G093000 Theobroma cacao HOM05D000048 ORTHO05D002390 5.2e-06 53.9 48 58.3
Thecc.07G093100 Theobroma cacao HOM05D000048 ORTHO05D002390 5.2e-06 53.9 49 59.2
CiPaw.11G043900 Carya illinoinensis HOM05D000048 ORTHO05D002390 6.8e-06 53.5 45 64.4
Ciclev10008146m.g Citrus clementina HOM05D000048 ORTHO05D002390 6.8e-06 53.5 49 59.2
Lsat_1_v5_gn_9_97780 Lactuca sativa HOM05D000048 ORTHO05D002390 6.8e-06 53.5 51 56.9
PSO210G0603 Papaver somniferum HOM05D000048 ORTHO05D002390 6.8e-06 53.5 50 56.0
PSO832G3688 Papaver somniferum HOM05D000048 ORTHO05D002390 6.8e-06 53.5 50 56.0
RcHm_v2.0_Chr5g0033061 Rosa chinensis HOM05D000048 ORTHO05D002390 6.8e-06 53.5 48 62.5
Ah.04g164760 Amaranthus hybridus HOM05D000048 ORTHO05D002390 8.9e-06 53.1 48 62.5
Aqoxy4G00102 Aquilegia oxysepala HOM05D000048 ORTHO05D002390 8.9e-06 53.1 48 60.4
PGR102G2133 Punica granatum HOM05D000048 ORTHO05D002390 8.9e-06 53.1 45 64.4


User provided reference genes

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