Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 3.4e-169 598.2 295 100.0
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 1.3e-144 516.5 285 85.6
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 1.7e-144 516.2 281 85.8
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 3.8e-144 515.0 282 85.5
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 5.5e-143 511.1 283 85.2
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 1.4e-141 506.5 288 83.0
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 4.4e-140 501.5 315 77.8
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 5.7e-140 501.1 312 78.8
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 2.8e-139 498.8 280 82.5
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 2.8e-139 498.8 283 83.0
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 2.6e-137 492.3 278 83.1
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 3.5e-137 491.9 278 82.7
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 4.5e-137 491.5 283 81.3
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 4.5e-137 491.5 280 83.6
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 1.0e-136 490.3 287 80.5
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 1.3e-136 490.0 295 79.7
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 1.3e-136 490.0 283 80.9
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.7e-136 489.6 287 79.8
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 2.2e-136 489.2 295 80.0
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 2.2e-136 489.2 265 87.2
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 3.8e-136 488.4 295 79.7
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 5.0e-136 488.0 287 80.1
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 1.1e-135 486.9 278 80.9
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 1.9e-135 486.1 283 80.6
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 2.5e-135 485.7 283 80.6
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 3.2e-135 485.3 282 81.2
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 4.2e-135 485.0 293 79.9
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 5.5e-135 484.6 292 77.4
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 2.1e-134 482.6 284 78.9
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 3.6e-134 481.9 277 81.6
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 4.7e-134 481.5 288 79.5
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 8.0e-134 480.7 278 80.9
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 1.0e-133 480.3 293 79.2
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 2.3e-133 479.2 280 80.0
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 2.3e-133 479.2 279 80.6
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 2.3e-133 479.2 279 81.0
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 2.3e-133 479.2 279 81.0
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 3.0e-133 478.8 289 81.0
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 4.0e-133 478.4 279 80.6
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 4.0e-133 478.4 286 80.1
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 1.2e-132 476.9 283 78.4
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 4.4e-132 474.9 286 79.4
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 9.7e-132 473.8 286 79.4
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 1.3e-131 473.4 275 78.9
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 1.7e-131 473.0 276 79.7
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 1.7e-131 473.0 286 78.3
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 1.7e-131 473.0 287 77.7
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 2.2e-131 472.6 275 78.5
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 2.2e-131 472.6 322 72.0
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 3.7e-131 471.9 278 79.5
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 4.8e-131 471.5 276 79.3
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 8.2e-131 470.7 285 77.2
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 8.2e-131 470.7 288 78.8
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 8.2e-131 470.7 286 78.3
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 8.2e-131 470.7 287 77.4
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 8.2e-131 470.7 281 77.9
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.8e-130 469.5 284 77.5
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 9.1e-130 467.2 275 78.2
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 9.1e-130 467.2 287 76.3
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 4.5e-129 464.9 290 75.2
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 7.7e-129 464.2 281 78.6
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 1.0e-128 463.8 274 78.1
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 2.2e-128 462.6 280 77.1
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 2.9e-128 462.2 260 83.1
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 2.9e-128 462.2 285 75.1
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 6.5e-128 461.1 273 80.2
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 1.1e-127 460.3 276 79.3
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 1.9e-127 459.5 274 76.6
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 2.5e-127 459.1 280 76.4
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 3.2e-127 458.8 277 76.2
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 5.5e-127 458.0 277 75.8
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 9.4e-127 457.2 320 70.6
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 1.2e-126 456.8 277 75.1
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 2.7e-126 455.7 290 75.9
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 2.7e-126 455.7 275 76.4
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 4.7e-126 454.9 273 76.2
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 8.0e-126 454.1 279 75.6
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 8.0e-126 454.1 275 75.3
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 1.4e-125 453.4 274 75.9
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 3.0e-125 452.2 283 76.7
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 4.0e-125 451.8 285 74.0
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 4.0e-125 451.8 281 77.6
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 6.8e-125 451.1 284 73.9
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 1.5e-124 449.9 290 72.4
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 5.7e-124 448.0 293 72.7
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 4.1e-122 441.8 275 77.8
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 5.4e-122 441.4 242 86.0
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 7.0e-122 441.0 281 73.0
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 7.0e-122 441.0 279 73.5
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 2.3e-120 436.0 286 72.0
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 2.3e-120 436.0 275 73.5
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 3.8e-120 435.3 304 72.0
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 1.1e-119 433.7 279 71.3
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 1.1e-119 433.7 273 73.3
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 3.3e-119 432.2 273 72.9
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 5.5e-119 431.4 328 67.1
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 2.1e-118 429.5 290 69.7
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 2.8e-118 429.1 277 72.9
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 6.1e-118 427.9 275 74.2
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 1.4e-114 416.8 270 73.0
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 1.4e-114 416.8 285 71.9
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 2.4e-114 416.0 271 73.1
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 1.2e-113 413.7 276 71.7
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 3.5e-113 412.1 311 67.5
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 3.8e-112 408.7 277 68.6
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 5.0e-112 408.3 365 58.1
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 4.0e-109 398.7 241 77.6
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 3.7e-107 392.1 223 82.5
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 7.8e-105 384.4 230 80.0
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.5e-100 370.2 275 65.1
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 7.5e-100 367.9 199 85.9
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.2e-97 360.5 198 84.3
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 6.0e-97 358.2 292 61.6
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 2.3e-96 356.3 210 78.1
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 2.3e-96 356.3 276 58.0
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 7.1e-90 334.7 280 57.5
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 3.5e-89 332.4 284 56.7
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 5.6e-87 325.1 228 69.7
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 3.2e-82 309.3 189 78.3
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 3.2e-82 309.3 189 78.3
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 7.8e-81 304.7 225 69.8
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 6.4e-75 285.0 226 60.2
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 1.2e-73 280.8 271 53.5
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 1.0e-64 251.1 297 49.2
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 5.1e-64 248.8 164 74.4
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 9.6e-63 244.6 155 73.5
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 2.6e-60 236.5 199 57.3
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 3.2e-58 229.6 199 53.3
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 6.7e-56 221.9 131 77.1
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 4.8e-54 215.7 266 45.1
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 2.4e-45 186.8 228 46.9
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 2.0e-39 167.2 210 42.4
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 2.4e-37 160.2 274 36.5
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 7.7e-36 155.2 108 66.7
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 2.2e-27 127.1 82 67.1
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 3.2e-26 123.2 105 57.1
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 3.1e-13 80.1 45 80.0
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 7.0e-13 79.0 68 52.9
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 4.5e-12 76.3 46 73.9


User provided reference genes

Program Settings