Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0069631 Lupinus albus HOM05D000135 ORTHO05D000816 2.4e-27 125.9 145 100.0
Lj1g0021536 Lotus japonicus HOM05D000135 ORTHO05D000816 4.8e-15 85.1 142 39.4
Lalb_Chr08g0237071 Lupinus albus HOM05D000135 ORTHO05D000816 1.8e-14 83.2 141 85.1
Prupe.5G152700 Prunus persica HOM05D000135 ORTHO05D000816 1.8e-14 83.2 141 36.9
RcHm_v2.0_Chr7g0190421 Rosa chinensis HOM05D000135 ORTHO05D000816 2.0e-13 79.7 141 34.8
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 3.4e-13 79.0 141 36.2
Glyma.04G136200 Glycine max HOM05D000135 ORTHO05D000816 4.5e-13 78.6 142 35.9
Glyma.04G136600 Glycine max HOM05D000135 ORTHO05D000816 4.5e-13 78.6 142 40.1
FvH4_5g08060 Fragaria vesca HOM05D000135 ORTHO05D000816 1.0e-12 77.4 141 34.8
FAN08G0825 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.0e-12 77.4 141 34.0
FAN18G3513 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.0e-12 77.4 141 34.8
Glyma.11G157100 Glycine max HOM05D000135 ORTHO05D000816 1.3e-12 77.0 142 43.7
FAN13G0461 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.7e-12 76.6 141 34.0
FAN04G2593 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.9e-12 75.9 141 34.0
Glyma.11G157200 Glycine max HOM05D000135 ORTHO05D000816 3.8e-12 75.5 142 43.7
Lalb_Chr12g0202161 Lupinus albus HOM05D000135 ORTHO05D000816 6.5e-12 74.7 141 84.4
Glyma.18G177900 Glycine max HOM05D000135 ORTHO05D000816 1.1e-11 73.9 141 36.9
Glyma.06G171150 Glycine max HOM05D000135 ORTHO05D000816 1.9e-11 73.2 145 80.0
TPR.G30002 Trifolium pratense HOM05D000135 ORTHO05D000816 1.9e-11 73.2 141 76.6
Psat0s14g0160 Pisum sativum HOM05D000135 ORTHO05D000816 2.5e-11 72.8 141 35.5
Gohir.A03G053400 Gossypium hirsutum HOM05D000135 ORTHO05D000816 4.2e-11 72.0 141 64.5
Psat0s3961g0080 Pisum sativum HOM05D000135 ORTHO05D000816 4.2e-11 72.0 141 68.8
MELO3C026214.2 Cucumis melo HOM05D000135 ORTHO05D000816 5.5e-11 71.6 138 33.3
Psat5g140800 Pisum sativum HOM05D000135 ORTHO05D000816 5.5e-11 71.6 136 56.6
Ca_24507_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 9.4e-11 70.9 142 56.3
Glyma.04G194800 Glycine max HOM05D000135 ORTHO05D000816 1.2e-10 70.5 45 73.3
CsaV3_1G000650 Cucumis sativus L. HOM05D000135 ORTHO05D000816 2.1e-10 69.7 139 32.4
Eucgr.B00125 Eucalyptus grandis HOM05D000135 ORTHO05D000816 2.1e-10 69.7 142 31.0
Glyma.05G047100 Glycine max HOM05D000135 ORTHO05D000816 2.1e-10 69.7 45 73.3
Glyma.17G128900 Glycine max HOM05D000135 ORTHO05D000816 2.1e-10 69.7 141 80.1
Atru.chr9.1078 Acer truncatum HOM05D000135 ORTHO05D000816 2.7e-10 69.3 136 33.1
VMungo1215G1953 Vigna mungo HOM05D000135 ORTHO05D000816 4.6e-10 68.6 136 84.6
Eucgr.B00124 Eucalyptus grandis HOM05D000135 ORTHO05D000816 6.1e-10 68.2 142 30.3
Glyma.04G136300 Glycine max HOM05D000135 ORTHO05D000816 6.1e-10 68.2 44 70.5
Lj4g0011466 Lotus japonicus HOM05D000135 ORTHO05D000816 7.9e-10 67.8 45 68.9
Lj3g0020733 Lotus japonicus HOM05D000135 ORTHO05D000816 1.4e-09 67.0 144 38.9
MD14G1158700 Malus domestica HOM05D000135 ORTHO05D000816 1.4e-09 67.0 45 66.7
ClCG06G017800 Citrullus lanatus HOM05D000135 ORTHO05D000816 2.3e-09 66.2 139 30.9
Psat0s3961g0120 Pisum sativum HOM05D000135 ORTHO05D000816 3.0e-09 65.9 153 35.9
Ca_00913_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 3.9e-09 65.5 45 64.4
Ca_29979_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 3.9e-09 65.5 45 64.4
Eucgr.B00123 Eucalyptus grandis HOM05D000135 ORTHO05D000816 5.1e-09 65.1 142 29.6
Eucgr.B00127 Eucalyptus grandis HOM05D000135 ORTHO05D000816 5.1e-09 65.1 142 29.6
Sabra15G0115400 Salix brachista HOM05D000135 ORTHO05D000816 6.7e-09 64.7 141 78.0
Medtr3g089070 Medicago truncatula HOM05D000135 ORTHO05D000816 1.1e-08 63.9 45 68.9
Medtr3g089090 Medicago truncatula HOM05D000135 ORTHO05D000816 1.5e-08 63.5 39 76.9
Lj4g0025643 Lotus japonicus HOM05D000135 ORTHO05D000816 2.0e-08 63.2 44 63.6
Potri.002G132500 Populus trichocarpa HOM05D000135 ORTHO05D000816 2.0e-08 63.2 45 66.7
Phvul.003G210000 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 2.5e-08 62.8 136 72.1
Sed0012230 Sechium edule HOM05D000135 ORTHO05D000816 3.3e-08 62.4 39 69.2
Phvul.005G026000 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 4.3e-08 62.0 136 41.2
Gohir.D10G109651 Gossypium hirsutum HOM05D000135 ORTHO05D000816 5.7e-08 61.6 141 30.5
VMungo1309G1946 Vigna mungo HOM05D000135 ORTHO05D000816 5.7e-08 61.6 45 66.7
Phvul.005G026100 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 7.4e-08 61.2 136 30.9
TAR629G1517 Trochodendron aralioides HOM05D000135 ORTHO05D000816 7.4e-08 61.2 139 35.3
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 9.7e-08 60.8 143 29.4
Sabra16G0213800 Salix brachista HOM05D000135 ORTHO05D000816 1.3e-07 60.5 134 28.4
Medtr4g103630 Medicago truncatula HOM05D000135 ORTHO05D000816 1.7e-07 60.1 45 57.8
Psat4g065400 Pisum sativum HOM05D000135 ORTHO05D000816 1.7e-07 60.1 151 34.4
Duzib205G1548 Durio zibethinus HOM05D000135 ORTHO05D000816 2.2e-07 59.7 45 66.7
PGSC0003DMG400002993 Solanum tuberosum HOM05D000135 ORTHO05D000816 2.2e-07 59.7 137 29.9
GSVIVG01008516001 Vitis vinifera HOM05D000135 ORTHO05D000816 2.2e-07 59.7 142 38.0
Psat1g085520 Pisum sativum HOM05D000135 ORTHO05D000816 2.8e-07 59.3 139 28.1
QL10p004084 Quercus lobata HOM05D000135 ORTHO05D000816 2.8e-07 59.3 45 60.0
Sabra16G0213700 Salix brachista HOM05D000135 ORTHO05D000816 2.8e-07 59.3 134 27.6
Solyc11g071740.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 2.8e-07 59.3 137 30.7
PGSC0003DMG400040538 Solanum tuberosum HOM05D000135 ORTHO05D000816 2.8e-07 59.3 137 30.7
CAN.G742.5 Capsicum annuum HOM05D000135 ORTHO05D000816 3.7e-07 58.9 146 28.1
Gohir.A10G155722 Gossypium hirsutum HOM05D000135 ORTHO05D000816 3.7e-07 58.9 141 28.4
PGSC0003DMG400045603 Solanum tuberosum HOM05D000135 ORTHO05D000816 3.7e-07 58.9 137 30.7
Eucgr.B00128 Eucalyptus grandis HOM05D000135 ORTHO05D000816 4.8e-07 58.5 136 27.9
Medtr4g103650 Medicago truncatula HOM05D000135 ORTHO05D000816 4.8e-07 58.5 40 62.5
PGSC0003DMG400002994 Solanum tuberosum HOM05D000135 ORTHO05D000816 4.8e-07 58.5 137 29.9
Medtr4g103655 Medicago truncatula HOM05D000135 ORTHO05D000816 6.3e-07 58.2 45 55.6
Nitab4.5_0007815g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 6.3e-07 58.2 138 29.7
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 6.3e-07 58.2 140 27.9
Duzib084G0108 Durio zibethinus HOM05D000135 ORTHO05D000816 8.2e-07 57.8 44 61.4
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 8.2e-07 57.8 139 28.8
Solyc11g071760.3 Solanum lycopersicum HOM05D000135 ORTHO05D000816 8.2e-07 57.8 137 29.9
Thecc.03G127000 Theobroma cacao HOM05D000135 ORTHO05D000816 8.2e-07 57.8 44 61.4
Nitab4.5_0002183g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.1e-06 57.4 139 29.5
Nitab4.5_0002498g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.1e-06 57.4 135 31.1
Sopen11g029420 Solanum pennellii HOM05D000135 ORTHO05D000816 1.1e-06 57.4 137 30.7
Nitab4.5_0000875g0030 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.4e-06 57.0 139 29.5
SalBow1G7946 Salvia bowleyana HOM05D000135 ORTHO05D000816 1.4e-06 57.0 139 46.8
SalBow7G1515 Salvia bowleyana HOM05D000135 ORTHO05D000816 1.4e-06 57.0 139 64.0
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 1.4e-06 57.0 137 29.9
Lj2C97T5 Lonicera japonica HOM05D000135 ORTHO05D000816 1.8e-06 56.6 134 43.3
Sopen11g029430 Solanum pennellii HOM05D000135 ORTHO05D000816 1.8e-06 56.6 143 28.7
CAN.G1463.22 Capsicum annuum HOM05D000135 ORTHO05D000816 2.4e-06 56.2 138 30.4
ATR0605G202 Amborella trichopoda HOM05D000135 ORTHO05D000816 3.1e-06 55.8 135 27.4
Dinv14818 Davidia involucrata HOM05D000135 ORTHO05D000816 3.1e-06 55.8 136 25.7
Gohir.D11G039500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 3.1e-06 55.8 45 57.8
Gorai.007G042400 Gossypium raimondii HOM05D000135 ORTHO05D000816 3.1e-06 55.8 45 57.8
TAR622G0218 Trochodendron aralioides HOM05D000135 ORTHO05D000816 3.1e-06 55.8 142 27.5
Duzib068G0781 Durio zibethinus HOM05D000135 ORTHO05D000816 4.1e-06 55.5 44 61.4
FAN02G0421 Fragaria x ananassa HOM05D000135 ORTHO05D000816 6.9e-06 54.7 134 27.6
Gohir.A11G035900 Gossypium hirsutum HOM05D000135 ORTHO05D000816 6.9e-06 54.7 45 60.0
Manes.17G104400 Manihot esculenta HOM05D000135 ORTHO05D000816 6.9e-06 54.7 141 51.1
CAN.G742.23 Capsicum annuum HOM05D000135 ORTHO05D000816 9.1e-06 54.3 136 28.7
CiPaw.03G053600 Carya illinoinensis HOM05D000135 ORTHO05D000816 9.1e-06 54.3 140 27.9
Sabra02G0103700 Salix brachista HOM05D000135 ORTHO05D000816 9.1e-06 54.3 40 62.5
Sopen06g030230 Solanum pennellii HOM05D000135 ORTHO05D000816 9.1e-06 54.3 43 58.1
PGSC0003DMG400005909 Solanum tuberosum HOM05D000135 ORTHO05D000816 9.1e-06 54.3 43 58.1
VMungo1080G0993 Vigna mungo HOM05D000135 ORTHO05D000816 9.1e-06 54.3 136 29.4


User provided reference genes

Program Settings