Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 2.3e-265 918.3 456 100.0
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 1.4e-174 616.7 451 70.1
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 5.5e-174 614.8 457 70.0
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 1.9e-171 606.3 457 69.8
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 2.8e-170 602.4 441 72.1
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 1.4e-169 600.1 424 72.6
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 1.2e-165 587.0 417 72.4
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 1.2e-165 587.0 417 72.4
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 1.8e-161 573.2 463 67.2
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 3.1e-161 572.4 417 71.5
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 9.4e-158 560.8 435 69.2
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 8.5e-151 537.7 462 64.1
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 4.0e-140 502.3 431 63.1
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 3.5e-136 489.2 425 60.2
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 2.9e-135 486.1 450 58.7
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 6.5e-135 485.0 462 58.2
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 1.5e-134 483.8 443 60.5
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 6.3e-130 468.4 430 59.3
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 8.9e-124 448.0 433 57.3
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 6.3e-122 441.8 469 54.8
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 4.1e-121 439.1 445 54.8
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 2.1e-117 426.8 453 54.1
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 3.6e-117 426.0 423 55.1
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 4.7e-117 425.6 450 52.9
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 1.2e-115 421.0 425 54.6
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 2.0e-115 420.2 435 54.3
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 2.6e-115 419.9 433 56.8
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 1.1e-113 414.5 454 51.1
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 5.4e-113 412.1 431 54.8
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.0e-112 410.2 440 53.4
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.7e-112 409.8 429 54.5
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 6.0e-112 408.7 432 53.7
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 1.0e-111 407.9 457 54.7
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 3.0e-111 406.4 440 51.1
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 3.0e-111 406.4 428 54.9
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 9.5e-110 401.4 448 51.1
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 9.5e-110 401.4 438 53.0
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.8e-108 397.1 421 54.6
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 1.9e-105 387.1 423 51.8
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 2.4e-105 386.7 419 51.3
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 2.4e-105 386.7 428 51.4
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 3.2e-105 386.3 485 49.5
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 4.1e-105 386.0 460 48.0
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.2e-104 384.4 442 51.8
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 2.7e-104 383.3 424 51.2
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 2.3e-103 380.2 436 48.6
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 1.5e-102 377.5 435 51.3
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 8.1e-101 371.7 462 47.4
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 6.8e-100 368.6 378 54.0
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 1.2e-99 367.9 436 48.2
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 4.4e-99 365.9 437 48.3
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 5.8e-99 365.5 436 49.3
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 9.9e-99 364.8 441 48.5
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 6.4e-98 362.1 434 48.6
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 2.4e-97 360.1 432 49.1
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 1.7e-95 354.0 434 47.0
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 3.0e-95 353.2 423 47.3
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 8.1e-93 345.1 430 46.7
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 8.1e-93 345.1 425 45.6
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 1.4e-92 344.4 455 46.4
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 5.2e-92 342.4 434 45.2
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 1.5e-91 340.9 439 45.8
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 2.6e-91 340.1 414 49.8
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 9.9e-91 338.2 438 46.6
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 1.3e-90 337.8 431 45.2
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 1.4e-89 334.3 421 46.6
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 3.2e-89 333.2 420 45.2
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 5.4e-89 332.4 452 44.7
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 9.2e-89 331.6 408 50.2
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 7.8e-88 328.6 431 43.6
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 1.0e-87 328.2 442 45.2
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 2.3e-87 327.0 463 40.4
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 1.4e-84 317.8 453 43.5
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 5.2e-84 315.8 433 44.6
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 6.9e-84 315.5 447 43.6
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 1.2e-83 314.7 444 43.5
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 2.6e-83 313.5 444 43.5
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 7.6e-83 312.0 465 42.8
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 4.9e-82 309.3 445 43.1
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 2.7e-80 303.5 179 86.6
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 7.8e-80 302.0 527 39.1
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 1.9e-78 297.4 407 42.0
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 9.0e-76 288.5 430 43.0
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 8.7e-71 271.9 429 40.1
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 2.4e-68 263.8 258 52.7
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 9.0e-68 261.9 435 37.7
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 1.2e-67 261.5 322 48.4
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 4.9e-66 256.1 163 76.7
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 1.9e-65 254.2 286 51.4
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 1.2e-64 251.5 440 38.6
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 2.3e-63 247.3 236 52.5
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 6.7e-63 245.7 274 51.1
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 8.7e-63 245.4 228 56.6
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 4.8e-61 239.6 331 46.5
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 2.4e-60 237.3 160 71.2
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 2.5e-57 227.3 125 82.4
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 2.7e-56 223.8 332 41.9
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 4.6e-56 223.0 450 33.8
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.3e-53 214.9 159 61.6
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 3.4e-51 206.8 424 34.4
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.3e-50 204.9 164 59.1
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 4.2e-49 199.9 156 65.4
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 5.5e-49 199.5 157 66.2
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.6e-48 198.0 157 65.6
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 9.7e-46 188.7 190 58.9
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 2.8e-45 187.2 150 57.3
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.5e-43 181.4 154 64.3
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 2.0e-43 181.0 436 32.3
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 1.9e-41 174.5 300 39.7
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 1.2e-40 171.8 265 47.2
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 8.8e-39 165.6 286 37.1
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 2.0e-38 164.5 192 50.0
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 2.0e-38 164.5 238 43.7
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 4.4e-38 163.3 479 29.4
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 6.3e-37 159.5 194 44.3
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 6.3e-37 159.5 194 44.3
ATR0178G019 Amborella trichopoda HOM05D005804 ORTHO05D006849 6.5e-34 149.4 130 53.1
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 1.0e-31 142.1 120 48.3
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 1.4e-31 141.7 111 66.7
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 3.9e-31 140.2 138 57.2
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 1.6e-27 128.3 280 38.6
SEGI_07598 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 2.6e-27 127.5 143 40.6
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 7.2e-25 119.4 241 38.2
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 1.2e-24 118.6 188 42.0
Mapoly0096s0044 Marchantia polymorpha HOM05D005804 ORTHO05D006849 2.1e-24 117.9 140 37.1
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 4.4e-22 110.2 328 30.8
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 2.8e-21 107.5 125 46.4
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 1.1e-20 105.5 139 47.5
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 3.1e-20 104.0 96 51.0
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 7.7e-19 99.4 178 41.0
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.5e-14 85.1 172 38.4
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 1.4e-12 78.6 71 62.0
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 6.6e-10 69.7 216 30.6
Sabra15G0117400 Salix brachista HOM05D005804 ORTHO05D006849 1.4e-07 62.0 108 39.8
Actinidia36808 Actinidia chinensis HOM05D005804 ORTHO05D006849 3.0e-07 60.8 47 59.6
arahy.Tifrunner.gnm1.ann1.SKCH66 Arachis hypogaea HOM05D001329 ORTHO05D023724 7.5e-06 56.2 77 45.5


User provided reference genes

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