Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 1.2e-126 456.4 228 100.0
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 1.9e-90 336.3 225 78.7
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 9.3e-90 334.0 225 77.3
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 3.5e-89 332.0 229 75.1
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 3.3e-87 325.5 228 74.6
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 6.2e-86 321.2 230 73.0
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 3.1e-85 318.9 214 75.7
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 5.3e-85 318.2 219 75.8
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 8.4e-83 310.8 205 77.1
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 1.9e-79 299.7 229 68.1
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 8.2e-78 294.3 228 68.0
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 1.1e-77 293.9 230 67.4
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 1.4e-77 293.5 230 67.4
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 3.1e-77 292.4 228 65.8
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 5.3e-77 291.6 229 67.2
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 9.0e-77 290.8 227 66.5
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 1.5e-76 290.0 230 68.3
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 2.6e-76 289.3 230 66.5
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 2.2e-75 286.2 221 68.8
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 2.2e-75 286.2 225 66.7
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 5.5e-74 281.6 230 64.3
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 2.7e-73 279.3 208 65.9
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 1.4e-72 276.9 185 73.5
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 5.1e-72 275.0 205 70.2
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 8.8e-72 274.2 225 64.0
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 3.3e-71 272.3 225 63.1
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 4.3e-71 271.9 200 68.0
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 7.4e-71 271.2 232 65.5
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 9.7e-71 270.8 233 63.1
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 1.3e-70 270.4 215 64.7
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.7e-70 270.0 207 65.7
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 1.7e-70 270.0 227 62.1
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 3.7e-70 268.9 227 63.9
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 4.8e-70 268.5 232 61.2
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 6.3e-70 268.1 223 64.6
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.3e-70 268.1 225 62.2
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 8.2e-70 267.7 225 62.7
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 1.4e-69 266.9 240 62.1
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 2.4e-69 266.2 182 71.4
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 3.1e-69 265.8 197 68.5
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 4.1e-69 265.4 220 62.3
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 6.9e-69 264.6 211 65.4
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 2.0e-68 263.1 185 69.7
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 1.7e-67 260.0 235 59.6
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 6.5e-67 258.1 210 62.4
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 8.5e-67 257.7 201 62.7
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.9e-66 256.5 205 65.4
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 1.2e-65 253.8 194 64.9
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.2e-65 253.8 194 64.9
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 2.1e-65 253.1 186 68.3
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 2.7e-65 252.7 223 61.0
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 3.6e-65 252.3 222 59.0
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 3.6e-65 252.3 231 58.0
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 4.7e-65 251.9 212 61.3
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 4.7e-65 251.9 285 53.3
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 4.7e-65 251.9 199 63.3
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 1.0e-64 250.8 193 64.8
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 1.4e-64 250.4 210 61.9
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 1.4e-64 250.4 194 66.0
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 3.0e-64 249.2 172 70.3
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 3.0e-64 249.2 216 60.2
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 3.9e-64 248.8 189 66.7
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 3.9e-64 248.8 194 65.5
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 5.1e-64 248.4 202 62.4
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 6.7e-64 248.1 171 68.4
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 4.4e-63 245.4 200 63.0
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 7.4e-63 244.6 205 61.5
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 9.7e-63 244.2 224 58.5
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 1.7e-62 243.4 189 64.0
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 8.2e-62 241.1 189 64.0
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 2.4e-61 239.6 190 66.8
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 5.3e-61 238.4 186 64.5
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 9.1e-61 237.7 190 62.1
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 9.1e-61 237.7 158 69.6
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 9.1e-61 237.7 191 63.4
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 2.0e-60 236.5 209 60.8
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 7.7e-60 234.6 190 61.1
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 7.7e-60 234.6 190 61.1
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 7.7e-60 234.6 174 67.8
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 1.0e-59 234.2 240 54.2
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 1.3e-59 233.8 196 59.7
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 2.9e-59 232.6 190 61.6
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 2.9e-59 232.6 179 65.9
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 1.5e-58 230.3 252 54.0
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 4.2e-58 228.8 174 66.1
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 7.2e-58 228.0 223 55.6
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 6.1e-57 224.9 183 62.8
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 1.0e-56 224.2 134 76.9
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 2.0e-55 219.9 228 56.6
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 5.7e-55 218.4 137 74.5
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 1.3e-54 217.2 285 47.4
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 7.5e-47 191.4 147 70.1
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 2.5e-42 176.4 160 65.6
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 1.6e-41 173.7 148 58.8
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 5.9e-36 155.2 99 73.7
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 7.7e-36 154.8 167 47.3
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 5.0e-35 152.1 99 68.7
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 3.3e-34 149.4 165 50.9
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 7.2e-34 148.3 149 53.7
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 3.4e-31 139.4 151 47.0
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 3.7e-22 109.4 138 47.1
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 6.4e-22 108.6 99 60.6
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 4.1e-21 105.9 112 49.1
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 2.0e-20 103.6 63 74.6
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 3.9e-19 99.4 64 67.2
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 4.4e-15 85.9 107 55.1
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.7e-14 84.0 61 63.9
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.4e-14 82.0 90 51.1
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 8.3e-14 81.6 61 63.9
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.2e-12 77.8 103 47.6
FAN04G0070 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.1e-08 63.2 55 58.2
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 7.6e-07 58.5 97 30.9
MCO03G440 Micromonas commoda HOM05D007115 ORTHO05D008923 2.9e-06 56.6 146 26.7


User provided reference genes

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