Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 6.1e-103 377.5 188 100.0
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 7.0e-75 284.3 187 75.9
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 5.5e-72 274.6 190 71.1
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 1.4e-70 270.0 187 73.3
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 4.4e-69 265.0 187 70.6
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 6.3e-68 261.2 187 70.6
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 3.5e-66 255.4 192 65.1
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 6.5e-65 251.1 178 68.5
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 4.7e-63 245.0 186 66.7
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 6.1e-63 244.6 175 70.9
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 8.3e-60 234.2 188 61.7
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 5.4e-59 231.5 184 62.5
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 9.2e-59 230.7 195 59.0
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 9.2e-59 230.7 183 61.2
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 2.0e-58 229.6 192 59.9
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 5.9e-58 228.0 195 59.0
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 2.3e-57 226.1 185 60.5
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 8.6e-57 224.2 186 59.7
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 8.6e-57 224.2 186 59.7
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 1.1e-56 223.8 190 58.9
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.5e-56 223.4 180 62.2
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 3.3e-56 222.2 188 61.7
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 3.3e-56 222.2 182 61.5
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 4.3e-56 221.9 180 61.7
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 5.6e-56 221.5 176 60.8
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 9.5e-56 220.7 188 59.0
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 4.7e-55 218.4 197 56.3
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 1.4e-54 216.9 181 58.0
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.4e-54 216.9 165 64.2
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 1.8e-54 216.5 188 55.9
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 2.3e-54 216.1 182 57.1
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 3.0e-54 215.7 181 56.9
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 4.0e-54 215.3 187 57.2
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 4.0e-54 215.3 185 60.0
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 5.2e-54 214.9 188 56.4
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 6.8e-54 214.5 167 58.7
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 6.8e-54 214.5 182 57.1
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 8.9e-54 214.2 180 59.4
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 8.9e-54 214.2 178 60.7
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.2e-53 213.8 180 60.0
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 1.5e-53 213.4 202 55.0
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.5e-53 213.4 184 58.2
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.5e-53 213.4 184 58.2
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 2.0e-53 213.0 179 57.5
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 2.6e-53 212.6 183 61.7
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 5.7e-53 211.5 181 59.1
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 9.8e-53 210.7 179 56.4
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 1.7e-52 209.9 184 58.2
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 2.9e-52 209.1 184 57.1
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 3.7e-52 208.8 185 57.3
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 1.1e-51 207.2 184 56.5
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.4e-51 206.8 185 57.8
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 1.4e-51 206.8 162 59.9
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 4.1e-51 205.3 184 58.7
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 4.1e-51 205.3 186 54.3
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 4.1e-51 205.3 183 54.6
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 1.6e-50 203.4 182 56.0
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 2.0e-50 203.0 190 55.3
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 4.6e-50 201.8 172 55.8
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 1.7e-49 199.9 190 53.7
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 3.9e-49 198.7 169 60.9
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 1.5e-48 196.8 186 55.4
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 2.5e-48 196.1 166 59.6
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 1.2e-47 193.7 183 55.7
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 1.4e-46 190.3 193 51.3
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 4.0e-46 188.7 188 51.1
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 2.0e-45 186.4 185 50.3
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 1.7e-44 183.3 189 48.7
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 6.4e-44 181.4 164 50.6
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 2.0e-42 176.4 184 51.6
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 1.7e-41 173.3 179 49.2
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 7.5e-37 157.9 160 48.8
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 3.2e-35 152.5 177 44.1
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 2.1e-31 139.8 180 45.0
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.8e-30 136.7 186 45.2
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.4e-30 136.3 163 48.5
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 4.4e-29 132.1 182 44.5
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.9e-28 129.4 177 39.0
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 8.4e-28 127.9 195 37.9
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 1.9e-27 126.7 256 31.6
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 3.5e-26 122.5 262 29.0
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 1.7e-25 120.2 84 64.3
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.7e-25 120.2 179 38.0
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.3e-24 115.9 179 38.0
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 9.6e-24 114.4 189 38.6
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.4e-22 110.5 180 37.2
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.8e-22 110.2 194 35.1
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 9.0e-22 107.8 123 48.8
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 3.4e-21 105.9 95 57.9
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 7.6e-21 104.8 205 31.7
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 7.6e-21 104.8 184 36.4
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.1e-19 98.2 189 33.9
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.2e-18 97.4 120 46.7
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 1.3e-17 94.0 78 61.5
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.5e-16 90.5 187 32.1
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.8e-15 86.3 195 29.7
Sabra01G0030800 Salix brachista HOM05D007512 ORTHO05D009524 1.9e-11 73.6 163 33.7
CSS0000822 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D009524 9.3e-11 71.2 116 37.1
Duzib177G0331 Durio zibethinus HOM05D000125 ORTHO05D020513 2.1e-10 70.1 120 37.5
Actinidia09356 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.8e-09 67.0 88 42.0
Manes.10G123525 Manihot esculenta HOM05D007512 ORTHO05D020513 1.8e-09 67.0 115 33.9
Sabra09G0120600 Salix brachista HOM05D000125 ORTHO05D020513 1.8e-09 67.0 117 35.9
COL.COLO4_13576 Corchorus olitorius HOM05D007512 ORTHO05D020513 1.1e-08 64.3 113 35.4
Actinidia14260 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.9e-08 63.5 78 42.3


User provided reference genes

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