Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0069081 Lupinus albus HOM05D001551 ORTHO05D006409 3.1e-26 120.9 57 100.0
Lj1g0026174 Lotus japonicus HOM05D001551 ORTHO05D003058 5.1e-13 77.0 49 69.4
Glyma.06G163000 Glycine max HOM05D001551 ORTHO05D003058 9.7e-12 72.8 49 69.4
Phvul.009G158700 Phaseolus vulgaris HOM05D001551 ORTHO05D003058 1.7e-11 72.0 49 65.3
arahy.Tifrunner.gnm1.ann1.YUW7Y0 Arachis hypogaea HOM05D001551 ORTHO05D003058 2.4e-10 68.2 57 59.6
Glyma.04G202500 Glycine max HOM05D001551 ORTHO05D003058 5.3e-10 67.0 49 63.3
arahy.Tifrunner.gnm1.ann1.1UR2FN Arachis hypogaea HOM05D001551 ORTHO05D003058 2.6e-09 64.7 57 52.6
Ca_10873_v3 Cicer arietinum L. HOM05D001551 ORTHO05D003058 5.9e-09 63.5 48 60.4
Lalb_Chr12g0202571 Lupinus albus HOM05D001551 ORTHO05D003058 1.0e-08 62.8 58 55.2
Haze_07088 Corylus avellana HOM05D001551 ORTHO05D005859 1.3e-08 62.4 54 55.6
TPR.G11384 Trifolium pratense HOM05D001551 ORTHO05D003058 1.3e-08 62.4 49 63.3
Peaxi162Scf00314g00750 Petunia axillaris HOM05D005248 ORTHO05D006409 2.2e-08 61.6 48 58.3
Psat5g055400 Pisum sativum HOM05D001551 ORTHO05D003058 2.2e-08 61.6 57 56.1
arahy.Tifrunner.gnm1.ann1.V1VZZ7 Arachis hypogaea HOM05D001551 ORTHO05D003058 8.5e-08 59.7 34 76.5
Cfa018697 Carpinus fangiana HOM05D001551 ORTHO05D003058 1.1e-07 59.3 56 53.6
Dinv13710 Davidia involucrata HOM05D001551 ORTHO05D005859 1.9e-07 58.5 59 50.8
Hma1.2p1_0452F.1_g155920 Hydrangea macrophylla HOM05D001551 ORTHO05D003058 2.5e-07 58.2 48 50.0
Thecc.03G141900 Theobroma cacao HOM05D001551 ORTHO05D003058 2.5e-07 58.2 53 54.7
CAN.G1008.51 Capsicum annuum HOM05D001551 ORTHO05D003058 5.5e-07 57.0 47 57.4
Manes.06G127500 Manihot esculenta HOM05D001551 ORTHO05D003058 5.5e-07 57.0 41 65.9
Rhsim08G0198800 Rhododendron simsii HOM05D001551 ORTHO05D003058 9.4e-07 56.2 57 47.4
Potri.015G108200 Populus trichocarpa HOM05D001551 ORTHO05D003058 1.2e-06 55.8 48 54.2
Atru.chr6.1937 Acer truncatum HOM05D001551 ORTHO05D005859 1.6e-06 55.5 53 49.1
CAN.G1008.50 Capsicum annuum HOM05D001551 ORTHO05D003058 1.6e-06 55.5 48 58.3
Hma1.2p1_0452F.1_g155910 Hydrangea macrophylla HOM05D001551 ORTHO05D003058 1.6e-06 55.5 48 47.9
Medtr8g096110 Medicago truncatula HOM05D001551 ORTHO05D003058 1.6e-06 55.5 50 58.0
Sabra15G0130900 Salix brachista HOM05D001551 ORTHO05D000263 1.6e-06 55.5 27 81.5
Duzib205G0895 Durio zibethinus HOM05D001551 ORTHO05D003058 2.1e-06 55.1 58 48.3
vmacro16761 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 2.1e-06 55.1 31 74.2
MSTRG.11202 Avicennia marina HOM05D001551 ORTHO05D003058 2.7e-06 54.7 27 81.5
Cc04_g05760 Coffea canephora HOM05D001551 ORTHO05D003058 2.7e-06 54.7 48 54.2
COL.COLO4_37270 Corchorus olitorius HOM05D001551 ORTHO05D003058 2.7e-06 54.7 43 62.8
DCAR_016334 Daucus carota HOM05D001551 ORTHO05D003058 2.7e-06 54.7 34 64.7
Nn7g36412 Nelumbo nucifera HOM05D001551 ORTHO05D003058 2.7e-06 54.7 48 54.2
SGA_v2.0_scaffold5G02807 Striga asiatica HOM05D001551 ORTHO05D003058 2.7e-06 54.7 56 51.8
TPR.G12858 Trifolium pratense HOM05D001551 ORTHO05D003058 2.7e-06 54.7 27 85.2
Medtr3g098490 Medicago truncatula HOM05D001551 ORTHO05D003058 3.6e-06 54.3 49 57.1
Sabra15G0128500 Salix brachista HOM05D001551 ORTHO05D003058 3.6e-06 54.3 27 77.8
Solyc03g118120.3 Solanum lycopersicum HOM05D001551 ORTHO05D003058 4.7e-06 53.9 27 77.8
Sopen03g037020 Solanum pennellii HOM05D001551 ORTHO05D003058 4.7e-06 53.9 27 77.8
SGA_v2.0_scaffold37G14671 Striga asiatica HOM05D001551 ORTHO05D003058 4.7e-06 53.9 36 69.4
Ca_16821_v3 Cicer arietinum L. HOM05D001551 ORTHO05D003058 6.1e-06 53.5 27 81.5
Phvul.002G280800 Phaseolus vulgaris HOM05D001551 ORTHO05D003058 6.1e-06 53.5 60 46.7
Dinv13709 Davidia involucrata HOM05D001551 ORTHO05D033857 7.9e-06 53.1 49 51.0
Medtr8g096100 Medicago truncatula HOM05D001551 ORTHO05D003058 7.9e-06 53.1 27 81.5


User provided reference genes

Program Settings