Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 2.4e-113 412.1 202 100.0
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 5.6e-62 241.5 155 78.7
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 4.9e-58 228.4 154 77.3
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 2.4e-57 226.1 154 76.0
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 3.3e-54 215.7 160 69.4
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 4.3e-54 215.3 159 72.3
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 1.6e-53 213.4 163 71.2
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 8.1e-53 211.1 160 71.9
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 8.1e-53 211.1 160 71.9
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.8e-52 209.9 160 71.9
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 1.8e-52 209.9 158 68.4
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 3.1e-52 209.1 162 71.6
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 3.1e-52 209.1 162 71.6
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 4.0e-52 208.8 165 69.1
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 4.0e-52 208.8 159 71.1
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 6.8e-52 208.0 160 71.2
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 6.8e-52 208.0 166 68.7
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 8.9e-52 207.6 160 71.2
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 1.5e-51 206.8 162 67.3
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 3.4e-51 205.7 157 67.5
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 9.9e-51 204.1 172 65.7
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 9.9e-51 204.1 159 67.3
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 9.9e-51 204.1 158 67.7
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 1.7e-50 203.4 159 68.6
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 3.7e-50 202.2 172 65.1
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 4.9e-50 201.8 169 65.7
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 2.4e-49 199.5 166 65.1
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 3.2e-49 199.1 157 65.6
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 3.2e-49 199.1 157 66.9
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 7.1e-49 198.0 165 67.3
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 9.2e-49 197.6 154 66.9
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 1.6e-48 196.8 172 64.0
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 2.1e-48 196.4 161 64.6
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 2.7e-48 196.1 157 68.2
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 6.0e-48 194.9 151 67.5
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 6.0e-48 194.9 142 70.4
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 7.8e-48 194.5 158 66.5
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 1.3e-47 193.7 171 63.2
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.3e-47 193.7 161 65.2
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 3.0e-47 192.6 152 67.8
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 8.6e-47 191.0 157 65.6
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 8.6e-47 191.0 157 66.2
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 1.5e-46 190.3 106 85.8
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 1.5e-46 190.3 163 62.6
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 2.5e-46 189.5 161 64.6
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 3.3e-46 189.1 161 64.0
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 3.3e-46 189.1 93 92.5
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 4.3e-46 188.7 136 68.4
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 5.6e-46 188.3 159 63.5
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 5.6e-46 188.3 92 93.5
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 9.6e-46 187.6 161 62.1
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 9.6e-46 187.6 114 80.7
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 1.2e-45 187.2 152 67.8
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 1.2e-45 187.2 122 75.4
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 2.1e-45 186.4 92 92.4
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 2.8e-45 186.0 161 63.4
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 2.8e-45 186.0 159 62.9
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 2.8e-45 186.0 160 63.1
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 6.2e-45 184.9 159 61.0
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 6.2e-45 184.9 99 86.9
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 6.2e-45 184.9 151 66.2
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 6.2e-45 184.9 157 62.4
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 8.1e-45 184.5 92 90.2
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 1.1e-44 184.1 149 65.8
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 1.8e-44 183.3 99 84.8
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 1.8e-44 183.3 153 62.7
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 1.8e-44 183.3 164 59.1
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 1.8e-44 183.3 99 85.9
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 3.1e-44 182.6 161 59.6
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 4.0e-44 182.2 89 93.3
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 4.0e-44 182.2 152 67.8
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 5.2e-44 181.8 117 73.5
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 6.8e-44 181.4 164 62.8
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 3.4e-43 179.1 166 60.2
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 3.4e-43 179.1 121 71.9
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 3.4e-43 179.1 91 90.1
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 5.8e-43 178.3 154 63.0
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 1.3e-42 177.2 122 73.0
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 4.9e-42 175.3 153 60.8
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 9.3e-41 171.0 161 59.6
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 2.1e-40 169.9 86 87.2
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 7.8e-40 167.9 183 51.9
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 1.7e-39 166.8 160 56.2
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 3.0e-39 166.0 149 63.1
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 3.0e-39 166.0 199 50.8
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 5.1e-39 165.2 83 94.0
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 8.7e-39 164.5 86 87.2
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 4.3e-38 162.2 183 54.1
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 2.1e-37 159.8 81 91.4
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 1.5e-35 153.7 162 55.6
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 1.5e-35 153.7 80 87.5
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 2.0e-35 153.3 82 86.6
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 1.7e-34 150.2 158 58.2
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 4.9e-34 148.7 75 89.3
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 6.4e-34 148.3 87 73.6
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 1.1e-33 147.5 82 81.7
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 1.7e-31 140.2 79 78.5
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 3.9e-31 139.0 147 49.7
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 6.6e-31 138.3 68 89.7
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 7.3e-30 134.8 133 57.1
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 1.4e-28 130.6 160 50.6
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 6.9e-28 128.3 111 58.6
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 1.2e-24 117.5 109 56.9


User provided reference genes

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