Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 1.0e-100 370.2 194 100.0
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 1.4e-89 333.2 194 89.2
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 4.3e-88 328.2 194 88.1
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 1.5e-85 319.7 195 86.7
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 2.0e-85 319.3 197 87.3
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 3.4e-85 318.5 195 82.6
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 1.4e-83 313.2 194 83.5
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 1.4e-83 313.2 201 84.1
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 2.5e-83 312.4 197 82.7
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 5.5e-83 311.2 196 82.1
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 1.2e-82 310.1 195 80.0
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 1.4e-81 306.6 180 85.0
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 3.0e-81 305.4 179 85.5
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 6.7e-81 304.3 195 79.0
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 8.8e-81 303.9 196 81.6
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 2.0e-80 302.8 195 77.9
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.0e-80 302.8 195 77.9
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.0e-80 302.8 195 77.9
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 2.0e-80 302.8 199 81.4
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 3.3e-80 302.0 197 78.2
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 3.3e-80 302.0 196 79.1
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 3.3e-80 302.0 196 79.1
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 3.3e-80 302.0 201 79.6
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 4.4e-80 301.6 198 82.3
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 5.7e-80 301.2 196 77.0
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 7.4e-80 300.8 195 78.5
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 9.7e-80 300.4 195 76.9
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 9.7e-80 300.4 195 77.4
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 1.7e-79 299.7 198 79.8
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 1.7e-79 299.7 182 83.0
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 1.7e-79 299.7 195 79.5
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.7e-79 299.7 197 78.2
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 1.7e-79 299.7 195 77.4
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 2.2e-79 299.3 201 80.6
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 2.8e-79 298.9 179 83.8
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 1.1e-78 297.0 195 77.4
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 1.1e-78 297.0 194 77.8
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 1.1e-78 297.0 194 77.8
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 1.8e-78 296.2 199 76.4
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 1.8e-78 296.2 197 77.2
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 9.1e-78 293.9 195 76.9
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 9.1e-78 293.9 197 76.1
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 1.2e-77 293.5 194 77.8
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 1.2e-77 293.5 197 76.1
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 5.9e-77 291.2 194 75.8
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 7.7e-77 290.8 195 76.4
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 7.7e-77 290.8 196 73.5
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 2.2e-76 289.3 177 81.9
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 3.8e-76 288.5 178 80.3
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 8.5e-76 287.3 194 74.2
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 1.9e-75 286.2 178 80.3
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 2.5e-75 285.8 194 73.7
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 2.5e-75 285.8 194 75.3
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 3.2e-75 285.4 190 77.4
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 3.2e-75 285.4 194 73.2
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 3.2e-75 285.4 178 80.3
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 3.2e-75 285.4 178 80.3
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 3.2e-75 285.4 178 80.3
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 1.2e-74 283.5 194 74.7
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 3.6e-74 282.0 197 74.6
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 4.7e-74 281.6 197 73.1
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 4.7e-74 281.6 194 74.7
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 6.1e-74 281.2 178 78.7
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 5.2e-73 278.1 170 81.2
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 4.4e-72 275.0 195 70.3
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 2.2e-71 272.7 198 69.7
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 4.1e-70 268.5 179 74.9
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 7.0e-70 267.7 207 69.6
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 1.0e-68 263.8 176 74.4
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 3.8e-68 261.9 196 71.9
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 5.0e-68 261.5 203 69.0
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 8.5e-68 260.8 201 69.2
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 8.5e-68 260.8 201 69.2
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 8.5e-68 260.8 200 71.0
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 1.5e-67 260.0 175 75.4
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 3.2e-67 258.8 203 67.0
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 3.2e-67 258.8 204 68.1
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 3.2e-67 258.8 204 68.1
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 3.2e-67 258.8 204 68.1
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 3.2e-67 258.8 204 68.1
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 3.2e-67 258.8 197 72.6
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 4.2e-67 258.5 176 71.6
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 4.2e-67 258.5 210 65.7
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 7.2e-67 257.7 174 73.6
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 1.2e-66 256.9 205 66.8
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 1.2e-66 256.9 205 66.8
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 1.2e-66 256.9 201 67.7
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 6.1e-66 254.6 206 66.0
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 1.0e-65 253.8 200 69.0
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 1.4e-65 253.4 178 69.7
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 5.7e-64 248.1 184 69.0
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 5.7e-64 248.1 184 69.0
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 4.1e-62 241.9 205 63.9
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 5.4e-62 241.5 169 73.4
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 2.7e-61 239.2 149 77.9
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 4.5e-61 238.4 176 67.6
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 7.2e-59 231.1 153 74.5
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.1e-54 217.2 161 68.9
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 5.6e-51 204.9 198 60.6
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 5.7e-48 194.9 178 55.1
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 7.0e-46 188.0 145 67.6
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 3.9e-44 182.2 178 51.7
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 6.2e-42 174.9 109 76.1
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 2.3e-41 172.9 177 49.7
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 6.8e-41 171.4 176 50.6
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 6.8e-41 171.4 109 75.2
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 5.8e-40 168.3 177 53.7
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 2.3e-36 156.4 102 75.5
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.7e-31 140.2 174 48.3
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 1.4e-30 137.1 123 55.3
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 4.7e-26 122.1 131 52.7
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 7.8e-21 104.8 63 81.0
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.7e-13 79.7 67 61.2
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 2.3e-12 76.6 52 71.2
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 1.8e-09 67.0 58 67.2
Nn8g39713 Nelumbo nucifera HOM05D006880 ORTHO05D008638 7.1e-06 55.1 33 72.7


User provided reference genes

Program Settings