Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0068051 Lupinus albus HOM05D007384 ORTHO05D008511 4.8e-77 291.2 158 100.0
Glyma.06G146100 Glycine max HOM05D007384 ORTHO05D008511 1.6e-24 116.7 163 50.9
Lj1g0001463 Lotus japonicus HOM05D007384 ORTHO05D008511 1.6e-24 116.7 164 50.6
Psat5g065520 Pisum sativum HOM05D007384 ORTHO05D008511 4.7e-24 115.2 169 49.1
arahy.Tifrunner.gnm1.ann1.P053PK Arachis hypogaea HOM05D007384 ORTHO05D008511 2.9e-21 105.9 162 45.7
arahy.Tifrunner.gnm1.ann1.66AXK3 Arachis hypogaea HOM05D007384 ORTHO05D008511 1.4e-20 103.6 162 44.4
arahy.Tifrunner.gnm1.ann1.3HN607 Arachis hypogaea HOM05D007384 ORTHO05D008511 1.2e-19 100.5 162 42.0
Medtr3g094800 Medicago truncatula HOM05D007384 ORTHO05D008511 1.2e-19 100.5 161 47.2
Glyma.08G141200 Glycine max HOM05D007384 ORTHO05D008511 2.0e-19 99.8 168 44.0
Lj4g0022190 Lotus japonicus HOM05D007384 ORTHO05D008511 2.7e-19 99.4 179 47.5
Lj4g0025402 Lotus japonicus HOM05D007384 ORTHO05D008511 2.7e-19 99.4 179 47.5
VMungo0251G1085 Vigna mungo HOM05D007384 ORTHO05D008511 1.3e-18 97.1 159 44.7
Glyma.05G183400 Glycine max HOM05D007384 ORTHO05D008511 5.0e-18 95.1 161 41.6
Glyma.04G219700 Glycine max HOM05D007384 ORTHO05D008511 1.5e-17 93.6 100 59.0
Lalb_Chr12g0203551 Lupinus albus HOM05D007384 ORTHO05D008511 1.2e-16 90.5 162 45.1
RcHm_v2.0_Chr2g0116341 Rosa chinensis HOM05D007384 ORTHO05D008511 1.2e-16 90.5 169 43.2
Lalb_Chr07g0184821 Lupinus albus HOM05D007384 ORTHO05D008511 3.6e-16 89.0 174 44.8
Dinv42700 Davidia involucrata HOM05D007384 ORTHO05D008511 8.1e-16 87.8 172 39.0
FAN23G2853 Fragaria x ananassa HOM05D007384 ORTHO05D008511 8.1e-16 87.8 170 44.1
FAN19G0612 Fragaria x ananassa HOM05D007384 ORTHO05D008511 1.1e-15 87.4 170 44.1
FAN26G2489 Fragaria x ananassa HOM05D007384 ORTHO05D008511 1.1e-15 87.4 170 43.5
arahy.Tifrunner.gnm1.ann1.XNBA0B Arachis hypogaea HOM05D007384 ORTHO05D008511 2.3e-15 86.3 83 63.9
FvH4_1g22200 Fragaria vesca HOM05D007384 ORTHO05D008511 3.1e-15 85.9 170 43.5
Potri.005G083900 Populus trichocarpa HOM05D007384 ORTHO05D008511 3.1e-15 85.9 154 39.0
arahy.Tifrunner.gnm1.ann1.AK8RBW Arachis hypogaea HOM05D007384 ORTHO05D008511 2.0e-14 83.2 160 46.2
Phvul.002G264500 Phaseolus vulgaris HOM05D007384 ORTHO05D008511 2.0e-14 83.2 159 41.5
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 3.4e-14 82.4 167 38.9
Phvul.009G139900 Phaseolus vulgaris HOM05D007384 ORTHO05D008511 4.4e-14 82.0 164 46.3
VMungo1309G0400 Vigna mungo HOM05D007384 ORTHO05D008511 9.8e-14 80.9 166 42.2
TPR.G40723 Trifolium pratense HOM05D007384 ORTHO05D008511 1.3e-13 80.5 156 43.6
Dinv19495 Davidia involucrata HOM05D007384 ORTHO05D008511 1.7e-13 80.1 177 33.3
MD01G1019000 Malus domestica HOM05D007384 ORTHO05D008511 2.2e-13 79.7 155 41.9
Sabra05G0069000 Salix brachista HOM05D007384 ORTHO05D008511 2.2e-13 79.7 166 35.5
Potri.007G081700 Populus trichocarpa HOM05D007384 ORTHO05D008511 6.4e-13 78.2 152 38.8
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 1.9e-12 76.6 170 35.9
Duzib187G0804 Durio zibethinus HOM05D007384 ORTHO05D008511 3.2e-12 75.9 161 37.3
Prupe.6G173600 Prunus persica HOM05D007384 ORTHO05D008511 4.1e-12 75.5 171 39.2
Manes.13G077680 Manihot esculenta HOM05D007384 ORTHO05D008511 1.2e-11 73.9 150 40.7
CiPaw.03G134700 Carya illinoinensis HOM05D007384 ORTHO05D008511 3.5e-11 72.4 178 38.2
Lsat_1_v5_gn_2_65360 Lactuca sativa HOM05D007384 ORTHO05D008511 5.1e-10 68.6 164 34.1
Peaxi162Scf00323g00037 Petunia axillaris HOM05D007384 ORTHO05D008511 6.6e-10 68.2 162 36.4
Duzib187G1860 Durio zibethinus HOM05D007384 ORTHO05D008511 1.5e-09 67.0 156 33.3
Hund03542 Selenicereus undatus HOM05D007384 ORTHO05D008511 2.5e-09 66.2 161 35.4
Gorai.003G046900 Gossypium raimondii HOM05D007384 ORTHO05D008511 7.3e-09 64.7 157 38.9
Sopen04g023570 Solanum pennellii HOM05D007384 ORTHO05D008511 7.3e-09 64.7 172 36.0
Solyc04g053145.1 Solanum lycopersicum HOM05D007384 ORTHO05D008511 1.2e-08 63.9 163 33.7
HanXRQChr10g0295241 Helianthus annuus HOM05D007384 ORTHO05D008511 1.6e-08 63.5 153 35.3
PGSC0003DMG400012958 Solanum tuberosum HOM05D007384 ORTHO05D008511 1.6e-08 63.5 174 32.8
TAR628G0188 Trochodendron aralioides HOM05D007384 ORTHO05D008511 1.6e-08 63.5 170 31.2
Rhsim10G0013800 Rhododendron simsii HOM05D007384 ORTHO05D008511 2.1e-08 63.2 162 38.3
Gohir.A10G086700 Gossypium hirsutum HOM05D007384 ORTHO05D008511 2.8e-08 62.8 172 35.5
SalBow5G0260 Salvia bowleyana HOM05D007384 ORTHO05D008511 2.8e-08 62.8 155 30.3
CANSAT01G1949 Cannabis sativa HOM05D007384 ORTHO05D008511 3.6e-08 62.4 175 34.9
CsaV3_2G017570 Cucumis sativus L. HOM05D007384 ORTHO05D008511 3.6e-08 62.4 173 32.4
CARHR278890 Cardamine hirsuta HOM05D012887 ORTHO05D008511 4.7e-08 62.0 159 34.6
SalBow5G4202 Salvia bowleyana HOM05D007384 ORTHO05D008511 6.2e-08 61.6 153 30.1
TWI74G0307 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 1.1e-07 60.8 169 36.1
MSTRG.23314 Avicennia marina HOM05D007384 ORTHO05D008511 1.8e-07 60.1 157 28.0
THA.LOC104799256 Tarenaya hassleriana HOM05D012887 ORTHO05D008511 1.8e-07 60.1 151 32.5
AT5G64880 Arabidopsis thaliana HOM05D012887 ORTHO05D008511 3.1e-07 59.3 167 34.1
Gorai.011G111700 Gossypium raimondii HOM05D007384 ORTHO05D008511 3.1e-07 59.3 164 35.4
Rhsim08G0006700 Rhododendron simsii HOM05D007384 ORTHO05D008511 3.1e-07 59.3 166 34.9
Sed0027168 Sechium edule HOM05D007384 ORTHO05D008511 4.0e-07 58.9 174 29.3
TAR520G0001 Trochodendron aralioides HOM05D007384 ORTHO05D008511 4.0e-07 58.9 170 29.4
Cc07_g16090 Coffea canephora HOM05D007384 ORTHO05D008511 5.2e-07 58.5 163 32.5
Manes.12G142100 Manihot esculenta HOM05D007384 ORTHO05D008511 5.2e-07 58.5 173 35.3
Sc07g0001520 Simmondsia chinensis HOM05D007384 ORTHO05D008511 1.5e-06 57.0 153 31.4
CiPaw.04G092400 Carya illinoinensis HOM05D007384 ORTHO05D008511 2.0e-06 56.6 177 32.2
AL8G42370 Arabidopsis lyrata HOM05D012887 ORTHO05D008511 4.4e-06 55.5 167 32.3
Carub.0008s2571 Capsella rubella HOM05D012887 ORTHO05D008511 5.8e-06 55.1 162 33.3
Nn5g28918 Nelumbo nucifera HOM05D007384 ORTHO05D008511 7.6e-06 54.7 168 31.5
BolC3t18390H Brassica oleracea HOM05D012887 ORTHO05D008511 9.9e-06 54.3 165 32.1


User provided reference genes

Program Settings