Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0067701 Lupinus albus HOM05D004876 ORTHO05D005488 1.1e-85 320.1 173 100.0
Phvul.009G042700 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 1.1e-58 230.3 172 69.8
Glyma.06G141500 Glycine max HOM05D004876 ORTHO05D005488 1.4e-58 229.9 173 72.3
Lj1g0004349 Lotus japonicus HOM05D004876 ORTHO05D005488 3.2e-58 228.8 172 72.7
Phvul.005G185900 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 2.1e-57 226.1 172 68.6
Duzib114G0677 Durio zibethinus HOM05D004876 ORTHO05D005488 6.0e-57 224.6 174 67.2
VMungo1309G0380 Vigna mungo HOM05D004876 ORTHO05D005488 1.3e-56 223.4 172 69.2
Prupe.2G265600 Prunus persica HOM05D004876 ORTHO05D005488 6.7e-56 221.1 177 68.4
TPR.G13975 Trifolium pratense HOM05D004876 ORTHO05D005488 1.5e-55 219.9 171 70.2
CiPaw.02G093900 Carya illinoinensis HOM05D004876 ORTHO05D005488 5.7e-55 218.0 178 66.3
Psat5g069360 Pisum sativum HOM05D004876 ORTHO05D005488 7.4e-55 217.6 171 74.9
QL08p065087 Quercus lobata HOM05D004876 ORTHO05D005488 2.8e-54 215.7 180 65.0
TWI09G0651 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 2.8e-54 215.7 183 66.1
CiPaw.04G175400 Carya illinoinensis HOM05D004876 ORTHO05D005488 4.8e-54 214.9 178 66.3
TPR.G28952 Trifolium pratense HOM05D004876 ORTHO05D005488 4.8e-54 214.9 171 68.4
TAR636G2293 Trochodendron aralioides HOM05D004876 ORTHO05D005488 9.0e-53 210.7 173 65.9
Atru.chr12.194 Acer truncatum HOM05D004876 ORTHO05D005488 2.0e-52 209.5 182 67.0
ClCG07G004830 Citrullus lanatus HOM05D004876 ORTHO05D005488 5.8e-52 208.0 175 64.6
MD01G1169400 Malus domestica HOM05D004876 ORTHO05D005488 7.6e-52 207.6 168 62.5
THA.LOC104824370 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 7.6e-52 207.6 176 61.9
CsaV3_5G010740 Cucumis sativus L. HOM05D004876 ORTHO05D005488 1.3e-51 206.8 171 64.3
Sed0020097 Sechium edule HOM05D004876 ORTHO05D005488 1.3e-51 206.8 171 65.5
Cpa.g.sc128.23 Carica papaya HOM05D004876 ORTHO05D005488 2.2e-51 206.1 175 64.6
Potri.019G061200 Populus trichocarpa HOM05D004876 ORTHO05D005488 2.9e-51 205.7 181 65.2
FvH4_7g26120 Fragaria vesca HOM05D004876 ORTHO05D005488 6.5e-51 204.5 176 65.9
MBI15_g39395_MAGBIO Magnolia biondii HOM05D004876 ORTHO05D005488 1.4e-50 203.4 171 66.7
FAN10G2920 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.9e-50 203.0 174 66.1
RcHm_v2.0_Chr1g0372561 Rosa chinensis HOM05D004876 ORTHO05D005488 2.5e-50 202.6 165 70.9
CANSAT64G2122 Cannabis sativa HOM05D004876 ORTHO05D005488 3.2e-50 202.2 178 66.9
MELO3C020110.2 Cucumis melo HOM05D004876 ORTHO05D005488 4.2e-50 201.8 171 63.7
CANSAT64G1352 Cannabis sativa HOM05D004876 ORTHO05D005488 7.1e-50 201.1 175 66.9
AUR62008150 Chenopodium quinoa HOM05D004876 ORTHO05D005488 9.3e-50 200.7 172 62.2
AUR62028732 Chenopodium quinoa HOM05D004876 ORTHO05D005488 9.3e-50 200.7 172 62.2
FAN12G2601 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.2e-49 200.3 167 64.7
PSO675G4155 Papaver somniferum HOM05D004876 ORTHO05D005488 2.7e-49 199.1 170 62.4
TWI53G0120 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 2.7e-49 199.1 178 64.6
PGR142G2846 Punica granatum HOM05D004876 ORTHO05D005488 4.6e-49 198.4 175 59.4
FAN03G2458 Fragaria x ananassa HOM05D004876 ORTHO05D005488 7.9e-49 197.6 174 64.9
PSO170G6098 Papaver somniferum HOM05D004876 ORTHO05D005488 5.1e-48 194.9 172 65.1
FAN06G0183 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.5e-47 193.4 178 64.0
Os03g0114200 Oryza sativa ssp. japonica HOM05D004876 ORTHO05D005488 2.2e-46 189.5 168 60.7
FvH4_4g04970 Fragaria vesca HOM05D004876 ORTHO05D005488 3.7e-46 188.7 186 58.1
Thecc.10G185000 Theobroma cacao HOM05D004876 ORTHO05D005488 6.3e-46 188.0 183 60.1
Ca_29506_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 8.2e-46 187.6 171 62.0
ATR0733G227 Amborella trichopoda HOM05D004876 ORTHO05D005488 2.4e-45 186.0 171 59.6
AL4G38670 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 2.4e-45 186.0 173 56.6
EL10Ac5g10661 Beta vulgaris HOM05D004876 ORTHO05D005488 3.1e-45 185.7 174 59.8
Manes.10G044800 Manihot esculenta HOM05D004876 ORTHO05D005488 3.1e-45 185.7 177 59.3
Sp4g23100 Schrenkiella parvula HOM05D004876 ORTHO05D005488 3.1e-45 185.7 177 55.9
BolC4t28355H Brassica oleracea HOM05D004876 ORTHO05D005488 4.1e-45 185.3 179 55.9
BcaB06g29175 Brassica carinata HOM05D004876 ORTHO05D005488 6.9e-45 184.5 182 54.4
Carub.0004s2308 Capsella rubella HOM05D004876 ORTHO05D005488 6.9e-45 184.5 179 55.9
AL4G34450 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 9.0e-45 184.1 173 54.9
ATR1127G178 Amborella trichopoda HOM05D004876 ORTHO05D005488 1.2e-44 183.7 166 60.2
A04p31160 Brassica napus HOM05D004876 ORTHO05D005488 1.2e-44 183.7 176 55.1
C04p68560 Brassica napus HOM05D004876 ORTHO05D005488 1.2e-44 183.7 176 55.1
AT2G40780 Arabidopsis thaliana HOM05D004876 ORTHO05D005488 1.5e-44 183.3 173 55.5
BraA04t18571Z Brassica rapa HOM05D004876 ORTHO05D005488 2.6e-44 182.6 176 54.5
CARHR135880 Cardamine hirsuta HOM05D004876 ORTHO05D005488 2.6e-44 182.6 178 59.6
Ca_29868_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 4.5e-44 181.8 106 84.0
Migut.F01232 Erythranthe guttata HOM05D004876 ORTHO05D005488 4.5e-44 181.8 169 58.0
Thhalv10017311m.g Eutrema salsugineum HOM05D004876 ORTHO05D005488 4.5e-44 181.8 169 59.8
Gohir.A10G177600 Gossypium hirsutum HOM05D004876 ORTHO05D005488 4.5e-44 181.8 179 57.0
HPP92_015433 Vanilla planifolia HOM05D004876 ORTHO05D005488 4.5e-44 181.8 160 61.9
vmacro06902 Vaccinium macrocarpon HOM05D004876 ORTHO05D005488 7.7e-44 181.0 178 56.2
Ca_16858_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 3.8e-43 178.7 188 56.9
COL.COLO4_19475 Corchorus olitorius HOM05D004876 ORTHO05D005488 5.0e-43 178.3 182 59.3
CDE07G1038 Ceratophyllum demersum HOM05D004876 ORTHO05D005488 6.5e-43 177.9 171 58.5
arahy.Tifrunner.gnm1.ann1.58ULDB Arachis hypogaea HOM05D004876 ORTHO05D005488 8.5e-43 177.6 182 61.0
Zm00001eb000910 Zea mays HOM05D004876 ORTHO05D005488 1.1e-42 177.2 172 61.6
Gohir.D10G184200 Gossypium hirsutum HOM05D004876 ORTHO05D005488 1.9e-42 176.4 179 55.9
Gorai.011G206400 Gossypium raimondii HOM05D004876 ORTHO05D005488 1.9e-42 176.4 179 55.9
Lj6g0009237 Lotus japonicus HOM05D004876 ORTHO05D005488 9.4e-42 174.1 172 62.8
Aa31LG3G1350 Aethionema arabicum HOM05D004876 ORTHO05D005488 3.6e-41 172.2 169 58.0
Peaxi162Scf00073g02225 Petunia axillaris HOM05D004876 ORTHO05D005488 6.1e-41 171.4 173 53.8
Haze_17370 Corylus avellana HOM05D004876 ORTHO05D005488 1.0e-40 170.6 177 57.1
THA.LOC104803220 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 1.4e-40 170.2 177 54.2
Nitab4.5_0000171g0270 Nicotiana tabacum HOM05D004876 ORTHO05D005488 6.7e-40 167.9 174 53.4
HanXRQChr14g0460541 Helianthus annuus HOM05D004876 ORTHO05D005488 2.0e-39 166.4 176 54.5
Nitab4.5_0006356g0050 Nicotiana tabacum HOM05D004876 ORTHO05D005488 2.5e-39 166.0 173 52.6
Ciclev10032334m.g Citrus clementina HOM05D004876 ORTHO05D005488 7.4e-39 164.5 158 55.7
CiPaw.04G175300 Carya illinoinensis HOM05D004876 ORTHO05D005488 9.7e-39 164.1 104 80.8
FAN17G0734 Fragaria x ananassa HOM05D004876 ORTHO05D005488 9.7e-39 164.1 243 44.0
Sabra19G0074800 Salix brachista HOM05D004876 ORTHO05D005488 9.7e-39 164.1 112 75.0
Aqoxy6G02070 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 1.3e-38 163.7 171 53.2
Dinv37250 Davidia involucrata HOM05D004876 ORTHO05D005488 1.3e-38 163.7 168 54.2
Lsat_1_v5_gn_5_104800 Lactuca sativa HOM05D004876 ORTHO05D005488 1.3e-38 163.7 163 56.4
Duzib106G1237 Durio zibethinus HOM05D004876 ORTHO05D005488 3.7e-38 162.2 178 52.8
BcaB01g03515 Brassica carinata HOM05D004876 ORTHO05D005488 8.2e-38 161.0 174 51.1
THA.LOC104808402 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 8.2e-38 161.0 140 60.7
CSS0007534 Camellia sinensis var. sinensis HOM05D004876 ORTHO05D005488 1.1e-37 160.6 170 52.9
Rhsim03G0153600 Rhododendron simsii HOM05D004876 ORTHO05D005488 1.8e-37 159.8 178 52.2
PGR142G0395 Punica granatum HOM05D004876 ORTHO05D005488 2.4e-37 159.5 163 50.9
Aqoxy2G01672 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 4.1e-37 158.7 171 52.0
Medtr3g093790 Medicago truncatula HOM05D004876 ORTHO05D005488 1.5e-36 156.8 157 56.7
CAN.G1229.8 Capsicum annuum HOM05D004876 ORTHO05D005488 5.9e-36 154.8 170 49.4
Migut.A00831 Erythranthe guttata HOM05D004876 ORTHO05D005488 1.3e-35 153.7 168 51.8
SEGI_18121 Sequoiadendron giganteum HOM05D004876 ORTHO05D005488 1.7e-35 153.3 175 49.1
Cc02_g05210 Coffea canephora HOM05D004876 ORTHO05D005488 2.2e-35 152.9 173 48.0
Sc10g0003050 Simmondsia chinensis HOM05D004876 ORTHO05D005488 2.9e-35 152.5 125 60.8
ECA247G1702 Erigeron canadensis HOM05D004876 ORTHO05D008274 3.8e-35 152.1 149 54.4
Ah.11g051130 Amaranthus hybridus HOM05D004876 ORTHO05D005488 6.5e-35 151.4 160 51.9
Eucgr.G03147 Eucalyptus grandis HOM05D004876 ORTHO05D005488 8.5e-35 151.0 174 53.4
PGSC0003DMG400011645 Solanum tuberosum HOM05D004876 ORTHO05D005488 2.5e-34 149.4 168 48.2
MSTRG.8381 Avicennia marina HOM05D004876 ORTHO05D005488 5.5e-34 148.3 175 48.0
Sopen05g030710 Solanum pennellii HOM05D004876 ORTHO05D005488 7.2e-34 147.9 166 48.2
Peaxi162Scf00167g01129 Petunia axillaris HOM05D004876 ORTHO05D005488 1.6e-33 146.7 144 54.2
Solyc05g052180.3 Solanum lycopersicum HOM05D004876 ORTHO05D005488 2.1e-33 146.4 163 49.1
unitig_736.g22953 Utricularia gibba HOM05D004876 ORTHO05D005488 2.1e-33 146.4 172 50.0
Aqoxy5G02193 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 3.6e-33 145.6 135 56.3
Dinv21858 Davidia involucrata HOM05D004876 ORTHO05D005488 7.9e-33 144.4 106 69.8
Oeu006067.1 Olea europaea HOM05D004876 ORTHO05D005488 3.0e-32 142.5 169 47.9
GSVIVG01038577001 Vitis vinifera HOM05D004876 ORTHO05D005488 3.9e-32 142.1 133 59.4
BcaC02g12879 Brassica carinata HOM05D004876 ORTHO05D005488 6.7e-32 141.4 137 54.0
BcaB05g22749 Brassica carinata HOM05D004876 ORTHO05D005488 4.4e-31 138.7 139 53.2
SalBow7G3110 Salvia bowleyana HOM05D004876 ORTHO05D005488 4.8e-30 135.2 173 48.0
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 8.2e-30 134.4 178 46.1
Rhsim04G0113200 Rhododendron simsii HOM05D004876 ORTHO05D005488 1.1e-29 134.0 182 46.7
Lsat_1_v5_gn_2_126741 Lactuca sativa HOM05D004876 ORTHO05D005488 4.1e-29 132.1 163 48.5
Mapoly0014s0200 Marchantia polymorpha HOM05D004876 ORTHO05D005488 7.0e-29 131.3 176 42.0
Lj8A52T23 Lonicera japonica HOM05D004876 ORTHO05D005488 2.6e-28 129.4 106 63.2
Nn2g10267 Nelumbo nucifera HOM05D004876 ORTHO05D005488 2.6e-28 129.4 81 80.2
Nitab4.5_0008902g0030 Nicotiana tabacum HOM05D004876 ORTHO05D005488 9.4e-26 120.9 173 45.1
Sopen03g025590 Solanum pennellii HOM05D004876 ORTHO05D005488 1.2e-25 120.6 106 57.5
TPR.G24790 Trifolium pratense HOM05D004876 ORTHO05D005488 4.7e-25 118.6 79 77.2
PGSC0003DMG400020604 Solanum tuberosum HOM05D004876 ORTHO05D005488 2.3e-24 116.3 106 55.7
Actinidia13638 Actinidia chinensis HOM05D004876 ORTHO05D005488 3.3e-23 112.5 127 54.3
Pp3c16_8280 Physcomitrium patens HOM05D004876 ORTHO05D005488 9.7e-23 110.9 184 38.6
AagrBONN_evm.TU.Sc2ySwM_368.2679 Anthoceros agrestis HOM05D004876 ORTHO05D005488 5.3e-21 105.1 165 41.8
HanXRQChr07g0204961 Helianthus annuus HOM05D004876 ORTHO05D005488 9.1e-21 104.4 106 58.5
Nn1g06656 Nelumbo nucifera HOM05D004876 ORTHO05D005488 1.9e-18 96.7 127 50.4
C03p81600 Brassica napus HOM05D004876 ORTHO05D005488 7.0e-13 78.2 108 42.6
BolC3t20430H Brassica oleracea HOM05D004876 ORTHO05D005488 7.0e-13 78.2 108 42.6
C01p26050 Brassica napus HOM05D004876 ORTHO05D005488 1.6e-12 77.0 101 44.6
Cre03.g155800 Chlamydomonas reinhardtii HOM05D004876 ORTHO05D005488 7.7e-12 74.7 121 36.4
AL4G14440 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 2.5e-10 69.7 62 53.2
MCO11G196 Micromonas commoda HOM05D004876 ORTHO05D005488 9.4e-10 67.8 117 32.5


User provided reference genes

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