Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 1.8e-194 682.6 377 100.0
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 1.6e-126 456.8 378 74.1
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 1.5e-116 423.7 278 81.7
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 3.1e-114 416.0 351 71.5
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 3.1e-114 416.0 351 71.5
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 1.3e-112 410.6 243 83.1
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 7.1e-111 404.8 276 74.3
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 2.1e-110 403.3 262 77.9
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 2.7e-110 402.9 276 73.9
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 2.7e-110 402.9 261 78.9
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 1.0e-109 401.0 321 73.2
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 1.0e-109 401.0 359 64.3
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 3.9e-109 399.1 322 66.8
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 3.9e-109 399.1 322 69.3
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 8.7e-109 397.9 262 77.1
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 1.9e-108 396.7 302 71.2
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 4.3e-108 395.6 306 68.3
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 2.1e-107 393.3 297 70.4
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 3.6e-107 392.5 350 63.1
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 3.6e-107 392.5 342 64.3
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 3.1e-106 389.4 267 74.2
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 4.0e-106 389.0 332 66.6
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 5.3e-106 388.7 330 64.2
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 5.3e-106 388.7 236 82.2
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 2.0e-105 386.7 251 77.3
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 2.0e-105 386.7 311 66.6
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 2.6e-105 386.3 334 62.9
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 5.8e-105 385.2 310 67.7
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 9.9e-105 384.4 303 69.3
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 1.4e-103 380.6 332 63.0
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 1.9e-103 380.2 286 69.6
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 2.4e-103 379.8 281 70.1
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 3.2e-103 379.4 309 68.0
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 4.2e-103 379.0 299 66.9
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 4.2e-103 379.0 299 66.9
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 5.5e-103 378.6 289 68.9
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 7.1e-103 378.3 248 75.8
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 7.1e-103 378.3 308 66.9
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 9.3e-103 377.9 262 72.9
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 1.2e-102 377.5 263 72.6
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 1.6e-102 377.1 248 75.8
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 2.1e-102 376.7 284 68.3
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 2.1e-102 376.7 314 63.7
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 2.7e-102 376.3 280 68.2
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 2.7e-102 376.3 280 68.2
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 4.6e-102 375.6 264 73.5
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 6.0e-102 375.2 260 72.3
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 1.0e-101 374.4 339 62.5
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 1.8e-101 373.6 282 68.4
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 1.8e-101 373.6 259 74.1
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 1.8e-101 373.6 316 64.6
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 2.3e-101 373.2 240 77.9
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 2.3e-101 373.2 240 77.9
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 2.3e-101 373.2 258 72.9
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 3.0e-101 372.9 242 76.4
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 3.0e-101 372.9 282 68.1
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 3.0e-101 372.9 248 74.6
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 6.7e-101 371.7 257 72.8
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 8.7e-101 371.3 244 75.0
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 2.5e-100 369.8 309 63.4
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 3.3e-100 369.4 285 68.1
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 3.3e-100 369.4 316 65.2
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 5.6e-100 368.6 282 69.1
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 5.6e-100 368.6 310 64.2
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 7.4e-100 368.2 300 66.0
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 7.4e-100 368.2 308 64.9
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 1.3e-99 367.5 268 68.3
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 1.6e-99 367.1 227 80.2
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 2.8e-99 366.3 318 64.2
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 3.7e-99 365.9 342 60.8
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 3.7e-99 365.9 242 74.4
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 4.8e-99 365.5 287 67.2
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 4.8e-99 365.5 314 63.4
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 1.1e-98 364.4 293 67.9
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 2.4e-98 363.2 270 67.4
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 2.4e-98 363.2 313 62.6
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 3.1e-98 362.8 333 59.5
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 4.0e-98 362.5 242 73.1
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 1.5e-97 360.5 306 62.4
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 2.0e-97 360.1 318 61.6
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 7.6e-97 358.2 245 73.9
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 7.6e-97 358.2 318 61.0
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.3e-96 357.5 355 58.0
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 1.7e-96 357.1 238 74.4
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 1.7e-96 357.1 238 74.4
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 2.9e-96 356.3 280 67.1
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 2.9e-96 356.3 244 72.1
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 3.8e-96 355.9 361 56.2
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 6.5e-96 355.1 235 75.7
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 2.5e-95 353.2 362 55.0
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 4.2e-95 352.4 319 60.5
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 7.1e-95 351.7 273 66.3
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 1.6e-94 350.5 273 65.9
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 2.7e-94 349.7 270 66.7
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 7.9e-94 348.2 268 64.9
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 1.0e-93 347.8 388 53.6
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 8.7e-93 344.7 236 73.3
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 1.9e-92 343.6 262 66.4
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 3.3e-92 342.8 228 73.2
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 1.3e-91 340.9 215 77.7
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 1.6e-91 340.5 342 55.8
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 2.8e-91 339.7 293 67.6
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 9.0e-90 334.7 262 63.0
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 2.0e-89 333.6 306 60.8
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 3.2e-87 326.2 200 79.5
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 8.7e-85 318.2 236 68.6
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 1.1e-84 317.8 302 54.3
FAN01G2544 Fragaria x ananassa HOM05D004331 ORTHO05D004984 2.0e-81 307.0 181 84.0
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 2.2e-80 303.5 179 84.4
GSVIVG01032862001 Vitis vinifera HOM05D004331 ORTHO05D004984 6.5e-80 302.0 178 82.6
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 4.2e-79 299.3 228 65.8
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 7.2e-79 298.5 236 63.1
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 1.2e-78 297.7 235 63.8
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 1.8e-77 293.9 236 61.9
C08p31740 Brassica napus HOM05D004331 ORTHO05D004984 9.7e-76 288.1 333 51.4
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 1.7e-75 287.3 333 50.5
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.0e-72 278.1 221 67.0
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 3.8e-72 276.2 253 56.1
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 6.5e-72 275.4 252 56.0
Oeu039397.2 Olea europaea HOM05D004331 ORTHO05D004984 2.3e-69 266.9 159 81.1
CiPaw.02G199300 Carya illinoinensis HOM05D004331 ORTHO05D004984 1.7e-67 260.8 175 74.9
Nitab4.5_0018056g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 1.8e-66 257.3 238 59.2
AUR62030578 Chenopodium quinoa HOM05D004331 ORTHO05D004984 2.4e-66 256.9 155 80.0
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 1.6e-65 254.2 222 58.1
Zm00001eb336450 Zea mays HOM05D004331 ORTHO05D004984 2.2e-64 250.4 153 79.7
CiPaw.01G307700 Carya illinoinensis HOM05D004331 ORTHO05D004984 1.5e-60 237.7 140 82.1
Ah.10g029610 Amaranthus hybridus HOM05D000033 ORTHO05D000913 6.3e-59 232.3 139 81.3
SMO361G0787 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 7.5e-52 208.8 224 47.3
SMO361G0173 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 2.2e-51 207.2 224 46.9
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 7.0e-50 202.2 342 42.4
BcaC04g21857 Brassica carinata HOM05D004331 ORTHO05D004984 7.2e-47 192.2 112 83.0
BcaC09g50949 Brassica carinata HOM05D004331 ORTHO05D004984 7.2e-47 192.2 112 83.9
BcaC09g50388 Brassica carinata HOM05D004331 ORTHO05D004984 1.6e-46 191.0 112 82.1
BcaC02g11378 Brassica carinata HOM05D004331 ORTHO05D004984 6.1e-46 189.1 112 83.0
C04p16400 Brassica napus HOM05D004331 ORTHO05D004984 6.1e-46 189.1 112 83.0
BolC1t02551H Brassica oleracea HOM05D004331 ORTHO05D004984 8.0e-46 188.7 112 81.2
C09p26570 Brassica napus HOM05D004331 ORTHO05D004984 2.3e-45 187.2 112 81.2
BolC9t55553H Brassica oleracea HOM05D004331 ORTHO05D004984 2.3e-45 187.2 112 81.2
C01p26060 Brassica napus HOM05D004331 ORTHO05D004984 8.8e-45 185.3 112 80.4
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 1.2e-44 184.9 348 39.9
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 1.2e-44 184.9 254 46.1
C01p18940 Brassica napus HOM05D004331 ORTHO05D004984 2.3e-40 170.6 102 79.4
BolC1t01820H Brassica oleracea HOM05D004331 ORTHO05D004984 2.3e-40 170.6 102 79.4
Cre05.g232752 Chlamydomonas reinhardtii HOM05D004331 ORTHO05D004984 8.6e-40 168.7 265 37.4
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 4.0e-37 159.8 272 39.0
PRCOL_00001688 Prasinoderma coloniale HOM05D004331 ORTHO05D004984 4.0e-37 159.8 255 38.4
Actinidia31642 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.8e-34 151.0 162 55.6
BcaC01g00580 Brassica carinata HOM05D003032 ORTHO05D003456 4.6e-33 146.4 84 88.1
C03p81590 Brassica napus HOM05D004331 ORTHO05D004984 4.6e-33 146.4 84 88.1
BolC3t20429H Brassica oleracea HOM05D004331 ORTHO05D004984 4.6e-33 146.4 84 88.1
BcaC04g23398 Brassica carinata HOM05D004331 ORTHO05D004984 7.8e-33 145.6 110 68.2
SHI31864 Sapria himalayana HOM05D004331 ORTHO05D004984 1.7e-32 144.4 91 75.8
HPP92_012539 Vanilla planifolia HOM05D004331 ORTHO05D004984 6.8e-29 132.5 128 56.2
Ah.10g029620 Amaranthus hybridus HOM05D004331 ORTHO05D004984 2.7e-25 120.6 100 62.0
AUR62030577 Chenopodium quinoa HOM05D004331 ORTHO05D004984 3.0e-24 117.1 103 58.3
Eucgr.G03162 Eucalyptus grandis HOM05D004331 ORTHO05D004984 5.0e-24 116.3 179 43.6
CiPaw.01G307900 Carya illinoinensis HOM05D004331 ORTHO05D004984 2.5e-23 114.0 89 66.3
MBI15_g10655_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 2.1e-22 110.9 171 44.4
BolC9t53789H Brassica oleracea HOM05D004331 ORTHO05D004984 4.7e-22 109.8 63 85.7
VMungo0540G1227 Vigna mungo HOM05D004331 ORTHO05D004984 6.2e-22 109.4 89 66.3
SHI31863 Sapria himalayana HOM05D004331 ORTHO05D004984 8.9e-21 105.5 65 72.3
Aqoxy4G02083 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 1.3e-19 101.7 63 74.6
SHI31865 Sapria himalayana HOM05D004331 ORTHO05D004984 1.4e-18 98.2 124 44.4
MCO04G099 Micromonas commoda HOM05D004331 ORTHO05D004984 7.1e-18 95.9 194 30.4
Zm00001eb123190 Zea mays HOM05D004331 ORTHO05D004984 1.2e-17 95.1 82 57.3
BraA04t18575Z Brassica rapa HOM05D004331 ORTHO05D016805 1.8e-13 81.3 44 88.6
BolC4t28360H Brassica oleracea HOM05D004331 ORTHO05D004984 2.9e-11 73.9 68 57.4
C08p13890 Brassica napus HOM05D013285 ORTHO05D004984 6.0e-09 66.2 72 52.8


User provided reference genes

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