Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0067571 Lupinus albus HOM05D003381 ORTHO05D003880 3.0e-52 208.4 115 100.0
Lalb_Chr08g0239391 Lupinus albus HOM05D003381 ORTHO05D003880 3.4e-40 168.3 114 81.6
Phvul.009G040500 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 1.5e-27 126.3 112 67.9
Ca_16840_v3 Cicer arietinum L. HOM05D003381 ORTHO05D003880 1.3e-26 123.2 109 67.9
Lj1g0021256 Lotus japonicus HOM05D003381 ORTHO05D003880 9.0e-25 117.1 108 63.0
Medtr3g093400 Medicago truncatula HOM05D003381 ORTHO05D003880 2.6e-24 115.5 111 64.0
TPR.G35911 Trifolium pratense HOM05D003381 ORTHO05D003880 2.6e-24 115.5 109 62.4
Lalb_Chr04g0252571 Lupinus albus HOM05D003381 ORTHO05D003880 7.6e-24 114.0 112 57.1
LjContig00155g0019595 Lotus japonicus HOM05D003381 ORTHO05D003880 9.3e-22 107.1 107 57.9
Psat5g070520 Pisum sativum HOM05D003381 ORTHO05D003880 9.3e-22 107.1 111 61.3
Glyma.06G139300 Glycine max HOM05D003381 ORTHO05D003880 1.0e-20 103.6 111 58.6
Glyma.04G225500 Glycine max HOM05D003381 ORTHO05D003880 2.3e-20 102.4 111 56.8
Glyma.14G188300 Glycine max HOM05D003381 ORTHO05D003880 5.7e-19 97.8 105 55.2
Atru.chr12.2499 Acer truncatum HOM05D003381 ORTHO05D003880 1.3e-18 96.7 80 65.0
Atru.chr12.2523 Acer truncatum HOM05D003381 ORTHO05D003880 1.3e-18 96.7 80 65.0
Psat5g070560 Pisum sativum HOM05D003381 ORTHO05D003880 1.3e-18 96.7 106 56.6
Potri.012G004500 Populus trichocarpa HOM05D003381 ORTHO05D003880 1.6e-18 96.3 86 64.0
CANSAT21G1431 Cannabis sativa HOM05D003381 ORTHO05D003880 2.8e-18 95.5 85 62.4
Lalb_Chr10g0102971 Lupinus albus HOM05D003381 ORTHO05D003880 4.8e-18 94.7 89 58.4
Sabra12G0000400 Salix brachista HOM05D003381 ORTHO05D003880 1.8e-17 92.8 86 61.6
RcHm_v2.0_Chr1g0383321 Rosa chinensis HOM05D003381 ORTHO05D003880 2.4e-17 92.4 82 64.6
Sopen06g029340 Solanum pennellii HOM05D003381 ORTHO05D003880 2.4e-17 92.4 84 64.3
Ciclev10022951m.g Citrus clementina HOM05D003381 ORTHO05D003880 3.1e-17 92.0 79 64.6
HanXRQChr08g0225861 Helianthus annuus HOM05D003381 ORTHO05D003880 4.1e-17 91.7 82 61.0
Phvul.008G187900 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 4.1e-17 91.7 81 63.0
MSTRG.26951 Avicennia marina HOM05D003381 ORTHO05D003880 5.3e-17 91.3 97 55.7
Peaxi162Scf00007g00254 Petunia axillaris HOM05D003381 ORTHO05D003880 5.3e-17 91.3 82 61.0
Migut.F00966 Erythranthe guttata HOM05D003381 ORTHO05D003880 6.9e-17 90.9 81 64.2
Nitab4.5_0007121g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 6.9e-17 90.9 84 60.7
Sabra15G0000300 Salix brachista HOM05D003381 ORTHO05D003880 6.9e-17 90.9 91 57.1
CSS0005275 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 1.2e-16 90.1 84 59.5
FAN03G2343 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.2e-16 90.1 82 62.2
Prupe.2G322300 Prunus persica HOM05D003381 ORTHO05D003880 1.2e-16 90.1 82 65.9
Sopen03g027490 Solanum pennellii HOM05D003381 ORTHO05D003880 1.2e-16 90.1 95 55.8
AUR62005946 Chenopodium quinoa HOM05D003381 ORTHO05D003880 1.5e-16 89.7 82 57.3
unitig_60.g25635 Utricularia gibba HOM05D003381 ORTHO05D003880 1.5e-16 89.7 82 59.8
CAN.G303.62 Capsicum annuum HOM05D003381 ORTHO05D003880 2.6e-16 89.0 82 62.2
VMungo1309G1451 Vigna mungo HOM05D003381 ORTHO05D003880 2.6e-16 89.0 112 56.2
CANSAT21G0934 Cannabis sativa HOM05D003381 ORTHO05D003880 3.4e-16 88.6 91 58.2
FAN10G2693 Fragaria x ananassa HOM05D003381 ORTHO05D003880 3.4e-16 88.6 82 62.2
FAN10G4285 Fragaria x ananassa HOM05D003381 ORTHO05D003880 3.4e-16 88.6 82 62.2
Hma1.2p1_0115F.1_g055840 Hydrangea macrophylla HOM05D003381 ORTHO05D003880 3.4e-16 88.6 79 62.0
Solyc03g096760.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 3.4e-16 88.6 95 54.7
PGSC0003DMG400027025 Solanum tuberosum HOM05D003381 ORTHO05D003880 4.5e-16 88.2 79 65.8
Cpa.g.sc3.189 Carica papaya HOM05D003381 ORTHO05D003880 7.7e-16 87.4 74 63.5
Dinv29190 Davidia involucrata HOM05D003381 ORTHO05D003880 7.7e-16 87.4 78 64.1
Migut.F00121 Erythranthe guttata HOM05D003381 ORTHO05D003880 7.7e-16 87.4 84 59.5
Potri.015G000500 Populus trichocarpa HOM05D003381 ORTHO05D003880 1.0e-15 87.0 91 54.9
Cc02_g00580 Coffea canephora HOM05D003381 ORTHO05D003880 1.3e-15 86.7 79 62.0
DCAR_010556 Daucus carota HOM05D003381 ORTHO05D003880 1.3e-15 86.7 85 60.0
Manes.01G002300 Manihot esculenta HOM05D003381 ORTHO05D003880 1.3e-15 86.7 82 59.8
ClCG01G000030 Citrullus lanatus HOM05D003381 ORTHO05D003880 1.7e-15 86.3 87 55.2
TAR374G1397 Trochodendron aralioides HOM05D003381 ORTHO05D003880 3.8e-15 85.1 80 61.2
AUR62028119 Chenopodium quinoa HOM05D003381 ORTHO05D003880 5.0e-15 84.7 102 50.0
PSO541G0132 Papaver somniferum HOM05D003381 ORTHO05D003880 6.5e-15 84.3 84 60.7
PSO675G1709 Papaver somniferum HOM05D003381 ORTHO05D003880 6.5e-15 84.3 84 60.7
TAR375G0964 Trochodendron aralioides HOM05D003381 ORTHO05D003880 6.5e-15 84.3 107 49.5
Ah.13g071060 Amaranthus hybridus HOM05D003381 ORTHO05D003880 8.5e-15 84.0 96 49.0
CAN.G303.61 Capsicum annuum HOM05D003381 ORTHO05D003880 8.5e-15 84.0 96 53.1
Dinv17275 Davidia involucrata HOM05D003381 ORTHO05D003880 8.5e-15 84.0 79 60.8
ECA233G1855 Erigeron canadensis HOM05D003381 ORTHO05D003880 1.4e-14 83.2 97 51.5
Migut.F00967 Erythranthe guttata HOM05D003381 ORTHO05D003880 1.4e-14 83.2 90 55.6
Sopen03g027520 Solanum pennellii HOM05D003381 ORTHO05D003880 1.4e-14 83.2 113 50.4
Solyc03g096780.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.9e-14 82.8 113 50.4
Sc14g0006700 Simmondsia chinensis HOM05D003381 ORTHO05D003880 2.5e-14 82.4 82 56.1
TWI81G0192 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 2.5e-14 82.4 93 53.8
Aqoxy5G04393 Aquilegia oxysepala HOM05D003381 ORTHO05D003880 4.2e-14 81.6 81 58.0
MD07G1303600 Malus domestica HOM05D003381 ORTHO05D003880 5.5e-14 81.3 82 59.8
SalBow4G2332 Salvia bowleyana HOM05D003381 ORTHO05D003880 5.5e-14 81.3 93 52.7
PSO017G3293 Papaver somniferum HOM05D003381 ORTHO05D003880 9.4e-14 80.5 79 59.5
Sed0013785 Sechium edule HOM05D003381 ORTHO05D003880 9.4e-14 80.5 80 57.5
EL10Ac3g05129 Beta vulgaris HOM05D003381 ORTHO05D003880 1.2e-13 80.1 102 50.0
CSS0002942 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 1.6e-13 79.7 92 55.4
Nitab4.5_0002691g0080 Nicotiana tabacum HOM05D003381 ORTHO05D003880 1.6e-13 79.7 113 48.7
PGSC0003DMG400000545 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.6e-13 79.7 113 49.6
Migut.F00119 Erythranthe guttata HOM05D003381 ORTHO05D003880 2.1e-13 79.3 76 61.8
Gohir.A08G106600 Gossypium hirsutum HOM05D003381 ORTHO05D003880 2.1e-13 79.3 80 57.5
FvH4_7g33340 Fragaria vesca HOM05D003381 ORTHO05D003880 2.7e-13 79.0 82 57.3
HanXRQChr08g0225881 Helianthus annuus HOM05D003381 ORTHO05D003880 3.6e-13 78.6 82 54.9
HanXRQChr08g0225771 Helianthus annuus HOM05D003381 ORTHO05D003880 4.6e-13 78.2 82 54.9
HanXRQChr08g0225851 Helianthus annuus HOM05D003381 ORTHO05D003880 4.6e-13 78.2 82 54.9
Nitab4.5_0002691g0070 Nicotiana tabacum HOM05D003381 ORTHO05D003880 4.6e-13 78.2 82 58.5
Oeu063749.1 Olea europaea HOM05D003381 ORTHO05D003880 6.1e-13 77.8 82 57.3
HanXRQChr16g0499781 Helianthus annuus HOM05D003381 ORTHO05D003880 7.9e-13 77.4 83 54.2
SalBow4G1643 Salvia bowleyana HOM05D003381 ORTHO05D003880 7.9e-13 77.4 74 59.5
Sopen03g027500 Solanum pennellii HOM05D003381 ORTHO05D003880 7.9e-13 77.4 100 50.0
EL10Ac3g05128 Beta vulgaris HOM05D003381 ORTHO05D003880 1.0e-12 77.0 85 55.3
AUR62005945 Chenopodium quinoa HOM05D003381 ORTHO05D003880 1.0e-12 77.0 80 56.2
PGSC0003DMG400000547 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.0e-12 77.0 95 51.6
HPP92_008910 Vanilla planifolia HOM05D003381 ORTHO05D003880 1.0e-12 77.0 102 42.2
CsaV3_5G000160 Cucumis sativus L. HOM05D003381 ORTHO05D003880 1.4e-12 76.6 82 57.3
Oeu017357.1 Olea europaea HOM05D003381 ORTHO05D003880 1.4e-12 76.6 112 50.9
Actinidia34289 Actinidia chinensis HOM05D003381 ORTHO05D003880 1.8e-12 76.3 76 60.5
Ah.13g071070 Amaranthus hybridus HOM05D003381 ORTHO05D003880 1.8e-12 76.3 102 48.0
Eucgr.K00481 Eucalyptus grandis HOM05D003381 ORTHO05D003880 1.8e-12 76.3 88 56.8
MD01G1231600 Malus domestica HOM05D003381 ORTHO05D003880 1.8e-12 76.3 82 57.3
Haze_00337 Corylus avellana HOM05D003381 ORTHO05D003880 3.0e-12 75.5 75 58.7
TWI81G0266 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 3.0e-12 75.5 93 51.6
Peaxi162Scf00815g00116 Petunia axillaris HOM05D003381 ORTHO05D003880 3.9e-12 75.1 82 56.1
SGA_v2.0_scaffold351G49675 Striga asiatica HOM05D003381 ORTHO05D003880 3.9e-12 75.1 95 47.4
ATR0579G061 Amborella trichopoda HOM05D003381 ORTHO05D003880 6.7e-12 74.3 82 53.7
Carub.0006s2251 Capsella rubella HOM05D003381 ORTHO05D003880 1.1e-11 73.6 107 43.9
Gohir.D08G117900 Gossypium hirsutum HOM05D003381 ORTHO05D003880 1.5e-11 73.2 83 55.4
Gorai.004G126500 Gossypium raimondii HOM05D003381 ORTHO05D003880 1.5e-11 73.2 83 55.4
THA.LOC104798994 Tarenaya hassleriana HOM05D003381 ORTHO05D003880 1.5e-11 73.2 82 51.2
Gohir.A08G106800 Gossypium hirsutum HOM05D003381 ORTHO05D003880 2.0e-11 72.8 89 52.8
Lsat_1_v5_gn_8_4301 Lactuca sativa HOM05D003381 ORTHO05D003880 2.5e-11 72.4 57 63.2
PGR142G3642 Punica granatum HOM05D003381 ORTHO05D003880 2.5e-11 72.4 104 49.0
Gohir.D08G117850 Gossypium hirsutum HOM05D003381 ORTHO05D003880 3.3e-11 72.0 80 55.0
Gorai.004G126400 Gossypium raimondii HOM05D003381 ORTHO05D003880 3.3e-11 72.0 80 55.0
Nitab4.5_0000115g0190 Nicotiana tabacum HOM05D003381 ORTHO05D003880 4.3e-11 71.6 82 56.1
CAN.G65.142 Capsicum annuum HOM05D003381 ORTHO05D003880 5.7e-11 71.2 63 60.3
Peaxi162Scf00685g10014 Petunia axillaris HOM05D003381 ORTHO05D003880 5.7e-11 71.2 61 60.7
MBI04_g09823_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 7.4e-11 70.9 80 55.0
SGA_v2.0_scaffold44G16873 Striga asiatica HOM05D003381 ORTHO05D003880 7.4e-11 70.9 84 51.2
AT3G49570 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 9.7e-11 70.5 75 52.0
BcaC03g17951 Brassica carinata HOM05D003381 ORTHO05D003880 9.7e-11 70.5 107 42.1
BolC2t12066H Brassica oleracea HOM05D003381 ORTHO05D003880 9.7e-11 70.5 107 42.1
BraA02t08981Z Brassica rapa HOM05D003381 ORTHO05D003880 9.7e-11 70.5 107 42.1
PGSC0003DMG400000546 Solanum tuberosum HOM05D003381 ORTHO05D003880 9.7e-11 70.5 114 46.5
AL5G29410 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 2.2e-10 69.3 75 50.7
C02p60110 Brassica napus HOM05D003381 ORTHO05D003880 2.2e-10 69.3 107 41.1
CARHR158590 Cardamine hirsuta HOM05D003381 ORTHO05D003880 2.2e-10 69.3 75 53.3
ECA232G1694 Erigeron canadensis HOM05D003381 ORTHO05D003880 2.2e-10 69.3 68 55.9
AT5G24660 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 3.7e-10 68.6 75 50.7
Thhalv10005368m.g Eutrema salsugineum HOM05D003381 ORTHO05D003880 3.7e-10 68.6 75 50.7
Sp5g12530 Schrenkiella parvula HOM05D003381 ORTHO05D003880 3.7e-10 68.6 75 50.7
AT5G24655 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 4.8e-10 68.2 75 50.7
AL6G36260 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 6.3e-10 67.8 75 49.3
C08p24550 Brassica napus HOM05D003381 ORTHO05D003880 6.3e-10 67.8 79 50.6
BolC8t50074H Brassica oleracea HOM05D003381 ORTHO05D003880 6.3e-10 67.8 79 50.6
COL.COLO4_14402 Corchorus olitorius HOM05D003381 ORTHO05D003880 6.3e-10 67.8 54 61.1
CARHR188800 Cardamine hirsuta HOM05D003381 ORTHO05D003880 8.2e-10 67.4 85 45.9
Sp2g22730 Schrenkiella parvula HOM05D003381 ORTHO05D003880 8.2e-10 67.4 75 49.3
Carub.0005s1590 Capsella rubella HOM05D003381 ORTHO05D003880 1.1e-09 67.0 75 50.7
AL6G36270 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 1.4e-09 66.6 75 48.0
Carub.0005s1591 Capsella rubella HOM05D003381 ORTHO05D003880 1.4e-09 66.6 75 52.0
Carub.0006s2252 Capsella rubella HOM05D003381 ORTHO05D003880 1.4e-09 66.6 75 48.0
Oeu055427.1 Olea europaea HOM05D003381 ORTHO05D003880 1.4e-09 66.6 61 60.7
Zm00001eb043810 Zea mays HOM05D003381 ORTHO05D003880 1.4e-09 66.6 96 42.7
BcaNung02004 Brassica carinata HOM05D003381 ORTHO05D003880 2.4e-09 65.9 75 49.3
C07p43060 Brassica napus HOM05D003381 ORTHO05D003880 2.4e-09 65.9 75 49.3
BolC7t44833H Brassica oleracea HOM05D003381 ORTHO05D003880 2.4e-09 65.9 75 49.3
Nitab4.5_0002867g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 3.1e-09 65.5 97 47.4
BcaC07g39421 Brassica carinata HOM05D003381 ORTHO05D003880 4.1e-09 65.1 79 48.1
A06p18160 Brassica napus HOM05D003381 ORTHO05D003880 4.1e-09 65.1 79 48.1
Solyc03g096770.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 4.1e-09 65.1 100 47.0
BcaC07g39418 Brassica carinata HOM05D003381 ORTHO05D003880 5.3e-09 64.7 75 50.7
A06p35480 Brassica napus HOM05D003381 ORTHO05D003880 5.3e-09 64.7 75 48.0
BolC8t50073H Brassica oleracea HOM05D003381 ORTHO05D003880 5.3e-09 64.7 75 49.3
BraA06t26471Z Brassica rapa HOM05D003381 ORTHO05D003880 5.3e-09 64.7 75 48.0
Zm00001eb220550 Zea mays HOM05D003381 ORTHO05D003880 5.3e-09 64.7 83 44.6
Aa31LG11G3910 Aethionema arabicum HOM05D003381 ORTHO05D003880 9.1e-09 63.9 74 48.6
Thhalv10010815m.g Eutrema salsugineum HOM05D003381 ORTHO05D003880 9.1e-09 63.9 88 46.6
AL5G29420 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 1.2e-08 63.5 75 49.3
BcaB01g00694 Brassica carinata HOM05D003381 ORTHO05D003880 1.2e-08 63.5 75 49.3
A06p18190 Brassica napus HOM05D003381 ORTHO05D003880 1.2e-08 63.5 75 48.0
BraA06t24903Z Brassica rapa HOM05D003381 ORTHO05D003880 1.2e-08 63.5 75 48.0
Solyc06g072990.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.2e-08 63.5 79 54.4
QL11p009417 Quercus lobata HOM05D003381 ORTHO05D003880 1.5e-08 63.2 86 46.5
Duzib084G1005 Durio zibethinus HOM05D003381 ORTHO05D003880 2.0e-08 62.8 80 51.2
Sp5g12540 Schrenkiella parvula HOM05D003381 ORTHO05D003880 2.6e-08 62.4 75 46.7
BcaC07g39419 Brassica carinata HOM05D003381 ORTHO05D003880 3.4e-08 62.0 74 48.6
Nn3g18090 Nelumbo nucifera HOM05D003381 ORTHO05D003880 3.4e-08 62.0 89 47.2
Eucgr.K00482 Eucalyptus grandis HOM05D003381 ORTHO05D003880 4.5e-08 61.6 79 51.9
Eucgr.K00530 Eucalyptus grandis HOM05D003381 ORTHO05D003880 4.5e-08 61.6 79 51.9
BcaC09g49963 Brassica carinata HOM05D003381 ORTHO05D003880 5.9e-08 61.2 55 54.5
vmacro06476 Vaccinium macrocarpon HOM05D003381 ORTHO05D003880 5.9e-08 61.2 65 56.9
QL09p005975 Quercus lobata HOM05D003381 ORTHO05D003880 1.0e-07 60.5 76 48.7
COL.COLO4_14401 Corchorus olitorius HOM05D003381 ORTHO05D003880 1.3e-07 60.1 99 41.4
Lsat_1_v5_gn_2_3421 Lactuca sativa HOM05D003381 ORTHO05D003880 2.9e-07 58.9 82 46.3
Peaxi162Scf00542g00013 Petunia axillaris HOM05D003381 ORTHO05D003880 6.5e-07 57.8 54 68.5
Lsat_1_v5_gn_8_4241 Lactuca sativa HOM05D003381 ORTHO05D003880 2.5e-06 55.8 82 45.1
Sabra01G0056200 Salix brachista HOM05D000001 ORTHO05D003880 3.2e-06 55.5 60 61.7
Aa31LG4G18060 Aethionema arabicum HOM05D003381 ORTHO05D003880 4.2e-06 55.1 83 42.2
SEGI_09109 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 4.2e-06 55.1 102 38.2
SEGI_32370 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 5.5e-06 54.7 105 38.1
SEGI_37007 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 9.4e-06 53.9 79 41.8


User provided reference genes

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