Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 0.0e+00 1596.3 865 100.0
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 0.0e+00 1247.6 877 80.2
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 0.0e+00 1135.6 839 76.2
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 0.0e+00 1117.8 871 73.2
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 0.0e+00 1114.4 871 72.4
Lalb_Chr23g0271841 Lupinus albus HOM05D003640 ORTHO05D004439 0.0e+00 1095.9 862 72.3
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 0.0e+00 1079.3 884 70.9
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 5.9e-312 1074.7 841 71.8
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 1.2e-310 1069.7 841 71.1
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 1.6e-304 1049.3 881 69.6
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 5.5e-300 1034.2 865 69.2
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 1.1e-289 1000.0 867 67.5
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 9.7e-289 996.9 868 67.1
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 2.4e-263 912.5 868 61.3
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 2.5e-260 902.5 887 59.8
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 1.2e-257 893.6 887 59.5
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 3.2e-255 885.6 875 61.5
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 3.1e-250 869.0 868 59.4
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 6.8e-250 867.8 913 57.7
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 3.0e-245 852.4 897 57.5
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 1.2e-241 840.5 879 58.5
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 1.5e-241 840.1 815 60.7
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 1.3e-237 827.0 879 55.6
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 3.0e-237 825.9 882 56.2
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 1.1e-236 823.9 874 56.6
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 5.6e-236 821.6 877 55.1
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 9.5e-236 820.8 881 56.9
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 9.5e-236 820.8 865 57.2
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 6.2e-235 818.1 868 56.9
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 1.5e-233 813.5 870 55.4
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 2.0e-233 813.1 896 55.1
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 5.8e-233 811.6 877 55.1
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 1.1e-231 807.4 877 57.2
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 2.1e-230 803.1 891 55.9
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 2.1e-230 803.1 871 56.1
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 3.0e-229 799.3 871 54.8
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 3.0e-229 799.3 888 56.4
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 9.6e-228 794.3 915 53.9
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 2.8e-227 792.7 888 55.0
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 6.2e-227 791.6 871 55.1
CANSAT21G0645 Cannabis sativa HOM05D003640 ORTHO05D004439 2.4e-226 789.6 865 56.3
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 5.2e-226 788.5 891 55.6
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 3.8e-224 782.3 856 55.0
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 4.9e-224 781.9 878 55.4
Sabra15G0004700 Salix brachista HOM05D003640 ORTHO05D004439 1.1e-223 780.8 876 55.9
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 2.4e-223 779.6 873 54.5
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 1.6e-222 776.9 872 53.1
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 4.6e-222 775.4 883 55.8
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 8.1e-219 764.6 884 53.2
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 2.4e-218 763.1 775 58.7
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.7e-216 756.9 830 54.2
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 7.1e-215 751.5 764 59.0
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 7.1e-215 751.5 873 53.6
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 2.3e-213 746.5 893 55.0
FvH4_7g32660 Fragaria vesca HOM05D003640 ORTHO05D004439 2.3e-213 746.5 796 55.8
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 1.9e-212 743.4 953 49.9
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 1.3e-211 740.7 765 57.8
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 4.0e-210 735.7 877 53.0
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 2.3e-205 719.9 885 52.8
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 2.3e-205 719.9 837 54.4
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 3.0e-205 719.5 889 53.8
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 8.1e-203 711.4 885 52.5
Solyc03g082490.4 Solanum lycopersicum HOM05D003640 ORTHO05D004439 6.0e-198 695.3 881 51.3
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 1.3e-197 694.1 887 51.1
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 5.1e-197 692.2 886 51.8
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 1.1e-196 691.0 899 48.5
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 7.4e-196 688.3 758 56.2
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 1.6e-195 687.2 914 50.7
Nitab4.5_0001993g0040 Nicotiana tabacum HOM05D003640 ORTHO05D004439 8.2e-195 684.9 864 51.6
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 1.7e-192 677.2 868 50.2
PGR142G2086 Punica granatum HOM05D003640 ORTHO05D004439 6.1e-190 668.7 876 50.7
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 1.3e-189 667.5 896 50.6
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 8.7e-189 664.8 842 50.7
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 4.5e-185 652.5 826 51.3
THA.LOC104825162 Tarenaya hassleriana HOM05D003640 ORTHO05D004439 2.9e-184 649.8 769 54.4
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 5.1e-181 639.0 859 49.2
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 1.1e-180 637.9 875 49.8
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 2.0e-180 637.1 883 48.8
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 3.3e-180 636.3 843 48.5
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 9.7e-180 634.8 894 47.4
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.2e-179 633.6 891 48.4
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 6.3e-179 632.1 883 49.0
DCAR_020359 Daucus carota HOM05D003640 ORTHO05D004439 1.5e-177 627.5 860 47.0
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.9e-176 623.2 883 48.4
MSTRG.26989 Avicennia marina HOM05D003640 ORTHO05D004439 5.0e-176 622.5 847 49.8
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.1e-175 621.3 878 47.5
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 5.7e-172 609.0 875 47.0
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 5.7e-172 609.0 925 47.6
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 7.4e-172 608.6 665 56.8
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 1.3e-171 607.8 883 47.9
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 3.2e-167 593.2 829 48.7
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 2.2e-163 580.5 812 45.9
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 2.8e-163 580.1 773 48.9
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 3.7e-163 579.7 788 48.4
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 1.8e-162 577.4 684 53.4
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 1.0e-160 571.6 878 45.6
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 1.1e-159 568.2 867 44.8
Gohir.A09G186400 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.1e-159 568.2 873 44.9
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 1.9e-159 567.4 847 47.5
ATR0580G072 Amborella trichopoda HOM05D003640 ORTHO05D004439 5.5e-159 565.8 904 44.1
Aa31sc289G20 Aethionema arabicum HOM05D003640 ORTHO05D004439 8.0e-158 562.0 687 52.3
Sopen03g022220 Solanum pennellii HOM05D003640 ORTHO05D004439 1.4e-157 561.2 720 50.8
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 4.0e-157 559.7 762 48.2
Sc19g0000670 Simmondsia chinensis HOM05D003640 ORTHO05D004439 2.5e-151 540.4 703 48.9
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 1.2e-150 538.1 825 45.8
CAN.G358.147 Capsicum annuum HOM05D003640 ORTHO05D004439 8.0e-150 535.4 617 52.8
DCAR_008967 Daucus carota HOM05D003640 ORTHO05D004439 8.8e-149 531.9 738 45.7
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 3.7e-147 526.6 806 45.3
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 9.1e-146 521.9 757 46.2
Os08g0543600 Oryza sativa ssp. japonica HOM05D003640 ORTHO05D004439 4.5e-145 519.6 869 43.0
Lsat_1_v5_gn_9_50221 Lactuca sativa HOM05D003640 ORTHO05D004439 2.3e-144 517.3 766 45.3
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 9.5e-143 511.9 858 43.4
Lsat_1_v5_gn_9_50181 Lactuca sativa HOM05D003640 ORTHO05D004439 1.6e-142 511.1 760 45.0
Zm00001eb037420 Zea mays HOM05D003640 ORTHO05D004439 6.8e-141 505.8 857 43.4
Zm00001eb198460 Zea mays HOM05D003640 ORTHO05D004439 1.2e-140 505.0 863 43.1
PSO063G3729 Papaver somniferum HOM05D003640 ORTHO05D004439 1.4e-138 498.0 832 42.1
CARHR266800 Cardamine hirsuta HOM05D003640 ORTHO05D004439 1.0e-136 491.9 772 46.6
CARHR266770 Cardamine hirsuta HOM05D003640 ORTHO05D004439 1.1e-135 488.4 751 46.1
AT5G53620 Arabidopsis thaliana HOM05D003640 ORTHO05D004439 5.6e-135 486.1 746 48.1
Carub.0008s1397 Capsella rubella HOM05D003640 ORTHO05D004439 8.0e-134 482.3 762 47.0
AL8G28460 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 1.8e-133 481.1 744 47.8
Thhalv10012857m.g Eutrema salsugineum HOM05D003640 ORTHO05D004439 5.6e-127 459.5 756 45.5
Carub.0008s1383 Capsella rubella HOM05D003640 ORTHO05D004439 1.6e-126 458.0 742 45.7
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 3.1e-125 453.8 872 39.9
CDE04G2417 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 7.1e-122 442.6 832 39.1
Sp6g15750 Schrenkiella parvula HOM05D003640 ORTHO05D004439 6.6e-120 436.0 761 42.7
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 1.5e-111 408.3 762 42.4
BolC3t14166H Brassica oleracea HOM05D003640 ORTHO05D004439 4.0e-109 400.2 736 41.0
C03p17530 Brassica napus HOM05D003640 ORTHO05D004439 1.7e-107 394.8 735 40.8
BcaB01g04251 Brassica carinata HOM05D003640 ORTHO05D004439 6.6e-104 382.9 734 40.2
BraA03t10798Z Brassica rapa HOM05D003640 ORTHO05D004439 6.6e-104 382.9 736 39.9
A03p15040 Brassica napus HOM05D003640 ORTHO05D004439 8.7e-104 382.5 735 40.0
QL09p007399 Quercus lobata HOM05D003640 ORTHO05D004439 1.4e-101 375.2 320 65.3
QL93p0214_0021 Quercus lobata HOM05D003640 ORTHO05D004439 1.4e-101 375.2 320 65.3
RcHm_v2.0_Chr1g0382561 Rosa chinensis HOM05D003640 ORTHO05D004439 4.0e-101 373.6 504 47.8
arahy.Tifrunner.gnm1.ann1.3V8RAA Arachis hypogaea HOM05D003640 ORTHO05D004439 1.7e-96 358.2 416 54.3
BcaB05g22060 Brassica carinata HOM05D003640 ORTHO05D004439 1.5e-95 355.1 707 39.0
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 5.3e-93 346.7 413 49.2
RcHm_v2.0_Chr1g0382631 Rosa chinensis HOM05D003640 ORTHO05D004439 2.7e-81 307.8 379 51.7
BcaB01g04247 Brassica carinata HOM05D003640 ORTHO05D004439 1.5e-71 275.4 654 35.0
Mapoly0021s0043 Marchantia polymorpha HOM05D003640 ORTHO05D004439 4.3e-71 273.9 950 29.4
Pp3c14_13150 Physcomitrium patens HOM05D003640 ORTHO05D004439 1.4e-69 268.9 795 33.2
RcHm_v2.0_Chr1g0382611 Rosa chinensis HOM05D003640 ORTHO05D004439 2.0e-63 248.4 238 58.4
unitig_37.g11993 Utricularia gibba HOM05D003640 ORTHO05D004439 2.4e-61 241.5 735 33.2
BcaC01g06262 Brassica carinata HOM05D003640 ORTHO05D004439 9.1e-61 239.6 734 31.7
Pp3c17_17470 Physcomitrium patens HOM05D003640 ORTHO05D004439 8.5e-59 233.0 848 29.1
SEGI_36158 Sequoiadendron giganteum HOM05D003640 ORTHO05D004439 1.6e-49 202.2 322 39.8
CDE07G0792 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 2.0e-47 195.3 685 29.5
RcHm_v2.0_Chr1g0382641 Rosa chinensis HOM05D003640 ORTHO05D004439 2.0e-39 168.7 147 64.6
PSO782G5739 Papaver somniferum HOM05D003640 ORTHO05D004439 3.4e-39 167.9 160 55.0
BraA03t10789Z Brassica rapa HOM05D003640 ORTHO05D004439 9.8e-39 166.4 157 59.9
A03p14940 Brassica napus HOM05D003640 ORTHO05D004439 2.2e-38 165.2 157 59.9
C09p43570 Brassica napus HOM05D003640 ORTHO05D004439 1.2e-33 149.4 210 44.3
HanXRQChr03g0061701 Helianthus annuus HOM05D003640 ORTHO05D004439 1.2e-31 142.9 167 50.9
Potri.016G069900 Populus trichocarpa HOM05D003640 ORTHO05D034990 2.8e-25 121.7 78 80.8
CDE04G2700 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.3e-22 112.8 182 41.2
Dinv35373 Davidia involucrata HOM05D003640 ORTHO05D004439 6.4e-22 110.5 103 63.1
HanXRQChr15g0479781 Helianthus annuus HOM05D003640 ORTHO05D004439 8.3e-22 110.2 127 48.8
HanXRQChr06g0170111 Helianthus annuus HOM05D003640 ORTHO05D004439 3.2e-21 108.2 125 48.0
PSO017G5262 Papaver somniferum HOM05D003640 ORTHO05D004439 2.1e-17 95.5 152 42.1
Dinv06471 Davidia involucrata HOM05D003640 ORTHO05D004439 3.1e-16 91.7 122 52.5
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 8.9e-16 90.1 129 44.2
C09p43560 Brassica napus HOM05D003640 ORTHO05D004439 1.4e-13 82.8 87 54.0
BolC9t57239H Brassica oleracea HOM05D003640 ORTHO05D004439 1.4e-13 82.8 87 54.0
PSO170G6851 Papaver somniferum HOM05D003640 ORTHO05D004439 3.2e-13 81.6 165 38.8
arahy.Tifrunner.gnm1.ann1.JKFZ9B Arachis hypogaea HOM05D003640 ORTHO05D082470 3.3e-10 71.6 63 61.9
MELO3C010660.2 Cucumis melo HOM05D003640 ORTHO05D004439 3.1e-08 65.1 45 71.1
AL8G28750 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 5.2e-08 64.3 181 34.3
BolC2t07935H Brassica oleracea HOM05D003640 ORTHO05D004439 5.8e-07 60.8 348 27.6
COL.COLO4_24960 Corchorus olitorius HOM05D003640 ORTHO05D004439 7.5e-07 60.5 99 42.4
C02p18030 Brassica napus HOM05D003640 ORTHO05D004439 2.2e-06 58.9 383 25.6
CsaV3_6G021420 Cucumis sativus L. HOM05D003640 ORTHO05D034990 3.7e-06 58.2 52 61.5
PGR042G3558 Punica granatum HOM05D000045 ORTHO05D000611 4.9e-06 57.8 147 34.0


User provided reference genes

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