Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0066901 Lupinus albus HOM05D000156 ORTHO05D005692 2.7e-97 358.6 174 100.0
Lalb_Chr08g0240211 Lupinus albus HOM05D000156 ORTHO05D005692 1.9e-58 229.6 181 70.7
Lalb_Chr23g0271611 Lupinus albus HOM05D000156 ORTHO05D005692 9.7e-47 190.7 172 63.4
Phvul.009G052200 Phaseolus vulgaris HOM05D000156 ORTHO05D005692 3.8e-43 178.7 182 56.6
Glyma.04G235400 Glycine max HOM05D000156 ORTHO05D005692 4.7e-41 171.8 184 53.3
arahy.Tifrunner.gnm1.ann1.129FS0 Arachis hypogaea HOM05D000156 ORTHO05D005692 2.0e-39 166.4 179 54.7
Medtr3g091560 Medicago truncatula HOM05D000156 ORTHO05D005692 7.5e-39 164.5 172 58.1
Ca_16710_v3 Cicer arietinum L. HOM05D000156 ORTHO05D005692 1.0e-35 154.1 175 56.6
TPR.G19372 Trifolium pratense HOM05D000156 ORTHO05D005692 1.0e-35 154.1 171 52.0
Glyma.14G159300 Glycine max HOM05D000156 ORTHO05D005692 1.7e-35 153.3 181 53.6
Psat6g034760 Pisum sativum HOM05D000156 ORTHO05D005692 1.1e-34 150.6 187 53.5
VMungo1309G2989 Vigna mungo HOM05D000156 ORTHO05D005692 1.6e-33 146.7 180 48.9
Lj1g0012037 Lotus japonicus HOM05D000156 ORTHO05D005692 2.7e-33 146.0 190 53.7
Ca_12790_v3 Cicer arietinum L. HOM05D000156 ORTHO05D005692 2.6e-31 139.4 187 50.3
Eucgr.A01455 Eucalyptus grandis HOM05D000156 ORTHO05D005692 1.7e-30 136.7 182 45.6
Glyma.06G129300 Glycine max HOM05D000156 ORTHO05D005692 3.7e-30 135.6 155 52.3
QL09p008741 Quercus lobata HOM05D000156 ORTHO05D005692 1.8e-29 133.3 165 49.1
TPR.G11989 Trifolium pratense HOM05D000156 ORTHO05D005692 2.4e-29 132.9 186 47.8
Prupe.2G309500 Prunus persica HOM05D000156 ORTHO05D005692 7.0e-29 131.3 179 44.7
Dinv29275 Davidia involucrata HOM05D000156 ORTHO05D005692 1.2e-28 130.6 173 46.2
Hma1.2p1_0404F.1_g145330 Hydrangea macrophylla HOM05D000156 ORTHO05D005692 1.2e-28 130.6 172 43.6
Dinv35340 Davidia involucrata HOM05D000156 ORTHO05D005692 1.6e-28 130.2 175 46.9
MD07G1288000 Malus domestica HOM05D000156 ORTHO05D005692 1.3e-27 127.1 174 43.7
Lj1g0014352 Lotus japonicus HOM05D000156 ORTHO05D005692 2.3e-27 126.3 175 50.9
Medtr1g007920 Medicago truncatula HOM05D000156 ORTHO05D005692 2.3e-27 126.3 194 46.9
Nitab4.5_0007005g0030 Nicotiana tabacum HOM05D000156 ORTHO05D005692 2.9e-27 125.9 170 45.3
TAR629G1391 Trochodendron aralioides HOM05D000156 ORTHO05D005692 6.5e-27 124.8 171 44.4
Psat5g076800 Pisum sativum HOM05D000156 ORTHO05D005692 1.9e-26 123.2 174 51.1
CSS0002181 Camellia sinensis var. sinensis HOM05D000156 ORTHO05D005692 4.2e-26 122.1 163 46.0
Atru.chr12.2221 Acer truncatum HOM05D000156 ORTHO05D005692 5.5e-26 121.7 184 42.4
Cpa.g.sc3.92 Carica papaya HOM05D000156 ORTHO05D005692 2.8e-25 119.4 179 45.3
Lj1C1018T7 Lonicera japonica HOM05D000156 ORTHO05D005692 2.8e-25 119.4 174 43.7
Nitab4.5_0005393g0020 Nicotiana tabacum HOM05D000156 ORTHO05D005692 4.7e-25 118.6 173 43.4
PGSC0003DMG400009086 Solanum tuberosum HOM05D000156 ORTHO05D005692 6.1e-25 118.2 165 45.5
Lj1C1021T2 Lonicera japonica HOM05D000156 ORTHO05D005692 2.3e-24 116.3 171 43.9
Potri.015G012500 Populus trichocarpa HOM05D000156 ORTHO05D005692 2.3e-24 116.3 170 48.2
Sabra15G0010200 Salix brachista HOM05D000156 ORTHO05D005692 3.0e-24 115.9 161 45.3
Potri.012G016200 Populus trichocarpa HOM05D000156 ORTHO05D005692 4.0e-24 115.5 169 43.2
Phvul.001G075300 Phaseolus vulgaris HOM05D000156 ORTHO05D005692 6.8e-24 114.8 182 44.0
DCAR_020324 Daucus carota HOM05D000156 ORTHO05D005692 1.2e-23 114.0 161 45.3
GSVIVG01038556001 Vitis vinifera HOM05D000156 ORTHO05D005692 2.0e-23 113.2 168 44.0
Cc02_g01500 Coffea canephora HOM05D000156 ORTHO05D005692 3.4e-23 112.5 181 43.6
Nn3g18974 Nelumbo nucifera HOM05D000156 ORTHO05D005692 7.5e-23 111.3 169 43.8
Manes.01G183800 Manihot esculenta HOM05D000156 ORTHO05D005692 1.3e-22 110.5 165 47.3
Peaxi162Scf00740g00112 Petunia axillaris HOM05D000156 ORTHO05D005692 2.8e-22 109.4 170 44.1
MD01G1218100 Malus domestica HOM05D000156 ORTHO05D005692 3.7e-22 109.0 175 40.6
Ciclev10019884m.g Citrus clementina HOM05D000156 ORTHO05D005692 4.9e-22 108.6 189 41.3
Actinidia34224 Actinidia chinensis HOM05D000156 ORTHO05D005692 1.4e-21 107.1 171 39.8
DCAR_008942 Daucus carota HOM05D000156 ORTHO05D005692 1.4e-21 107.1 164 42.7
Haze_00207 Corylus avellana HOM05D000156 ORTHO05D005692 1.2e-20 104.0 180 42.2
PGR042G0912 Punica granatum HOM05D000156 ORTHO05D005692 1.2e-20 104.0 180 42.2
Sopen03g022890 Solanum pennellii HOM05D000156 ORTHO05D005692 1.6e-20 103.6 169 41.4
Cfa016234 Carpinus fangiana HOM05D000156 ORTHO05D005692 2.0e-20 103.2 180 40.0
Actinidia08652 Actinidia chinensis HOM05D000156 ORTHO05D005692 2.7e-20 102.8 173 37.0
Migut.F00207 Erythranthe guttata HOM05D000156 ORTHO05D005692 5.9e-20 101.7 179 39.7
Manes.02G143900 Manihot esculenta HOM05D000156 ORTHO05D005692 7.8e-20 101.3 171 42.7
Nn1g00265 Nelumbo nucifera HOM05D000156 ORTHO05D005692 7.8e-20 101.3 160 42.5
CiPaw.05G197300 Carya illinoinensis HOM05D000156 ORTHO05D005692 1.0e-19 100.9 181 40.3
Lj3A904T80 Lonicera japonica HOM05D000156 ORTHO05D005692 1.3e-19 100.5 171 38.6
CAN.G481.15 Capsicum annuum HOM05D000156 ORTHO05D005692 1.7e-19 100.1 173 38.7
TWI14G0702 Tripterygium wilfordii HOM05D000156 ORTHO05D005692 3.8e-19 99.0 161 43.5
MSTRG.27024 Avicennia marina HOM05D000156 ORTHO05D005692 1.9e-18 96.7 169 39.6
HanXRQChr01g0020471 Helianthus annuus HOM05D000156 ORTHO05D005692 1.9e-18 96.7 160 42.5
VMungo0647G1193 Vigna mungo HOM05D000156 ORTHO05D005692 1.9e-18 96.7 179 40.2
FAN03G3454 Fragaria x ananassa HOM05D000156 ORTHO05D005692 7.3e-18 94.7 178 43.3
ECA248G0969 Erigeron canadensis HOM05D005282 ORTHO05D002071 1.6e-17 93.6 158 40.5
FAN06G0347 Fragaria x ananassa HOM05D000156 ORTHO05D005692 1.6e-17 93.6 181 42.5
FvH4_7g31490 Fragaria vesca HOM05D000156 ORTHO05D005692 4.7e-17 92.0 181 42.0
FAN06G2724 Fragaria x ananassa HOM05D000156 ORTHO05D005692 4.7e-17 92.0 181 42.0
Gohir.A12G249600 Gossypium hirsutum HOM05D000156 ORTHO05D005692 4.7e-17 92.0 180 37.8
FAN01G1839 Fragaria x ananassa HOM05D000156 ORTHO05D005692 6.1e-17 91.7 179 41.3
CiPaw.06G045900 Carya illinoinensis HOM05D000156 ORTHO05D005692 1.4e-16 90.5 165 39.4
Sed0003090 Sechium edule HOM05D000156 ORTHO05D005692 2.3e-16 89.7 171 38.0
FAN10G0121 Fragaria x ananassa HOM05D000156 ORTHO05D005692 3.0e-16 89.4 179 41.3
FAN10G3506 Fragaria x ananassa HOM05D000156 ORTHO05D005692 3.0e-16 89.4 179 41.3
arahy.Tifrunner.gnm1.ann1.733TCI Arachis hypogaea HOM05D000156 ORTHO05D005692 4.0e-16 89.0 153 39.9
CAN.G312.4 Capsicum annuum HOM05D000156 ORTHO05D005692 5.2e-16 88.6 165 40.6
Rhsim09G0205900 Rhododendron simsii HOM05D000156 ORTHO05D005692 5.2e-16 88.6 190 36.3
Aqoxy7G00069 Aquilegia oxysepala HOM05D000156 ORTHO05D005692 6.8e-16 88.2 163 37.4
CSS0044772 Camellia sinensis var. sinensis HOM05D000156 ORTHO05D005692 6.8e-16 88.2 177 37.3
AUR62006086 Chenopodium quinoa HOM05D000156 ORTHO05D005692 1.5e-15 87.0 180 37.2
EL10Ac3g05275 Beta vulgaris HOM05D000156 ORTHO05D005692 3.4e-15 85.9 172 36.6
Gohir.A08G095724 Gossypium hirsutum HOM05D000156 ORTHO05D005692 7.5e-15 84.7 180 37.8
Sed0011018 Sechium edule HOM05D000156 ORTHO05D005692 9.8e-15 84.3 174 36.2
AUR62019408 Chenopodium quinoa HOM05D000156 ORTHO05D005692 2.2e-14 83.2 182 36.3
ClCG05G008970 Citrullus lanatus HOM05D000156 ORTHO05D005692 2.2e-14 83.2 177 39.5
CANSAT21G2206 Cannabis sativa HOM05D000156 ORTHO05D005692 3.7e-14 82.4 184 35.3
Peaxi162Scf00618g00342 Petunia axillaris HOM05D000156 ORTHO05D005692 3.7e-14 82.4 167 37.7
Hund21008 Selenicereus undatus HOM05D000156 ORTHO05D005692 4.9e-14 82.0 167 34.1
MSTRG.8650 Avicennia marina HOM05D000156 ORTHO05D005692 6.4e-14 81.6 168 33.3
CsaV3_3G019820 Cucumis sativus L. HOM05D000156 ORTHO05D005692 6.4e-14 81.6 175 37.7
Gohir.D12G250400 Gossypium hirsutum HOM05D000156 ORTHO05D005692 1.8e-13 80.1 180 35.6
Gorai.008G268500 Gossypium raimondii HOM05D000156 ORTHO05D005692 1.8e-13 80.1 180 35.6
TAR375G0133 Trochodendron aralioides HOM05D000156 ORTHO05D005692 2.4e-13 79.7 159 38.4
Gorai.004G114300 Gossypium raimondii HOM05D000156 ORTHO05D005692 3.2e-13 79.3 178 37.1
Oeu037178.1 Olea europaea HOM05D000156 ORTHO05D005692 7.0e-13 78.2 152 38.8
Oeu037179.1 Olea europaea HOM05D000156 ORTHO05D005692 7.0e-13 78.2 152 38.8
RcHm_v2.0_Chr1g0380521 Rosa chinensis HOM05D000156 ORTHO05D005692 7.0e-13 78.2 161 36.6
Gohir.D08G107000 Gossypium hirsutum HOM05D000156 ORTHO05D005692 9.2e-13 77.8 178 37.1
SalBow4G2739 Salvia bowleyana HOM05D000156 ORTHO05D005692 1.2e-12 77.4 158 38.6
Sc13g0009910 Simmondsia chinensis HOM05D000156 ORTHO05D005692 6.0e-12 75.1 161 34.2
vmacro10124 Vaccinium macrocarpon HOM05D000156 ORTHO05D005692 1.7e-11 73.6 160 38.8
Thhalv10010338m.g Eutrema salsugineum HOM05D000156 ORTHO05D005692 5.0e-11 72.0 182 30.8
Thecc.03G199800 Theobroma cacao HOM05D000156 ORTHO05D005692 5.0e-11 72.0 190 34.7
Sabra12G0015800 Salix brachista HOM05D000156 ORTHO05D005692 6.6e-11 71.6 169 36.1
Duzib205G0054 Durio zibethinus HOM05D000156 ORTHO05D005692 2.5e-10 69.7 187 33.7
Duzib084G0055 Durio zibethinus HOM05D000156 ORTHO05D005692 3.3e-10 69.3 182 34.1
MBI06_g13418_MAGBIO Magnolia biondii HOM05D000156 ORTHO05D005692 1.2e-09 67.4 169 33.7
BcaB01g00733 Brassica carinata HOM05D000156 ORTHO05D005692 1.6e-09 67.0 124 37.1
SGA_v2.0_scaffold192G40536 Striga asiatica HOM05D000156 ORTHO05D005692 1.6e-09 67.0 139 35.3
Carub.0005s1548 Capsella rubella HOM05D000156 ORTHO05D005692 2.1e-09 66.6 119 37.0
ATR0602G248 Amborella trichopoda HOM05D000156 ORTHO05D005692 6.2e-09 65.1 171 33.3
MELO3C008499.2 Cucumis melo HOM05D000156 ORTHO05D005692 8.0e-09 64.7 175 34.3
AT3G49260 Arabidopsis thaliana HOM05D000156 ORTHO05D005692 1.1e-08 64.3 118 34.7
Sp5g12820 Schrenkiella parvula HOM05D000156 ORTHO05D005692 1.1e-08 64.3 174 29.9
AL5G29010 Arabidopsis lyrata HOM05D000156 ORTHO05D005692 1.4e-08 63.9 178 31.5
BraA06t24928Z Brassica rapa HOM05D000156 ORTHO05D005692 1.4e-08 63.9 124 36.3
CARHR158130 Cardamine hirsuta HOM05D000156 ORTHO05D005692 1.8e-08 63.5 118 34.7
Aa31LG4G17670 Aethionema arabicum HOM05D000156 ORTHO05D005692 3.1e-08 62.8 196 29.6
CDE02G3200 Ceratophyllum demersum HOM05D000156 ORTHO05D005692 3.1e-08 62.8 161 31.1
PGSC0003DMG400019610 Solanum tuberosum HOM05D000156 ORTHO05D005692 3.1e-08 62.8 158 34.8
TAR629G3322 Trochodendron aralioides HOM05D000156 ORTHO05D005692 4.0e-08 62.4 115 38.3
Aa31LG10G7420 Aethionema arabicum HOM05D000156 ORTHO05D001430 2.6e-07 59.7 189 30.7
A06p18500 Brassica napus HOM05D000156 ORTHO05D005692 2.6e-07 59.7 124 35.5
THA.LOC104815133 Tarenaya hassleriana HOM05D000156 ORTHO05D005692 9.8e-07 57.8 116 34.5
C08p24270 Brassica napus HOM05D000156 ORTHO05D005692 3.7e-06 55.8 124 31.5
BcaC07g39397 Brassica carinata HOM05D000156 ORTHO05D005692 4.9e-06 55.5 124 33.1
BcaB02g09582 Brassica carinata HOM05D000156 ORTHO05D005692 8.3e-06 54.7 72 43.1


User provided reference genes

Program Settings