Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 5.2e-165 584.3 299 100.0
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 1.1e-125 453.8 299 77.3
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 1.2e-124 450.3 296 76.4
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 5.1e-120 434.9 301 72.1
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 5.1e-120 434.9 301 72.1
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 6.6e-120 434.5 303 75.2
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 1.9e-119 433.0 301 73.8
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 2.8e-118 429.1 296 74.3
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 7.6e-116 421.0 301 72.1
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 4.2e-114 415.2 300 70.7
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 4.9e-107 391.7 312 67.6
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 6.0e-105 384.8 298 67.4
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 3.9e-104 382.1 296 67.9
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 2.5e-103 379.4 295 67.1
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 3.3e-103 379.0 304 66.8
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 9.6e-103 377.5 297 65.3
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 1.6e-102 376.7 312 64.4
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 6.2e-102 374.8 297 66.0
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.4e-101 373.6 295 65.1
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 1.8e-101 373.2 297 66.0
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 3.1e-101 372.5 297 65.3
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.1e-101 372.5 295 65.4
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 5.3e-101 371.7 309 63.1
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 9.0e-101 370.9 253 73.9
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 2.0e-100 369.8 297 65.3
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 3.4e-100 369.0 297 64.0
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.5e-100 368.6 304 63.2
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 5.8e-100 368.2 304 63.2
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 5.8e-100 368.2 296 64.2
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.3e-99 367.1 297 65.7
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 2.2e-99 366.3 296 63.5
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 2.2e-99 366.3 304 62.8
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.2e-99 366.3 304 62.8
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 2.9e-99 365.9 296 63.9
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 1.1e-98 364.0 305 64.3
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.4e-98 363.6 301 63.1
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.9e-98 363.2 301 63.1
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 5.5e-98 361.7 337 57.6
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 7.1e-98 361.3 305 61.3
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 9.3e-98 360.9 297 62.6
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 1.2e-97 360.5 297 62.6
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 3.5e-97 359.0 297 63.6
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 6.0e-97 358.2 306 61.1
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 1.0e-96 357.5 307 61.2
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 3.0e-96 355.9 300 62.0
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 2.5e-95 352.8 296 63.5
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 2.2e-94 349.7 293 62.5
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.8e-94 348.6 293 62.1
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 4.8e-94 348.6 308 60.4
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 1.1e-93 347.4 297 60.9
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 2.4e-93 346.3 298 60.4
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 3.1e-93 345.9 297 63.0
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 9.0e-93 344.4 301 59.8
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 2.6e-92 342.8 313 58.1
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 2.6e-92 342.8 295 60.3
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 3.4e-92 342.4 313 59.4
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.3e-91 340.5 296 60.5
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.1e-90 337.4 296 61.5
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 7.2e-90 334.7 297 59.3
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.6e-89 333.6 296 60.5
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 3.6e-89 332.4 316 56.6
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 6.1e-89 331.6 305 59.3
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.4e-88 330.5 302 59.6
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 6.7e-88 328.2 316 55.7
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 2.5e-87 326.2 316 55.1
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 3.3e-87 325.9 316 56.0
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 7.4e-87 324.7 307 57.3
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 1.7e-86 323.6 300 58.3
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 1.7e-86 323.6 306 58.2
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 2.8e-86 322.8 315 56.8
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 3.7e-86 322.4 316 56.6
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 3.7e-86 322.4 316 56.6
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 4.8e-86 322.0 318 56.3
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 4.8e-86 322.0 318 56.3
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 1.1e-85 320.9 316 57.0
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 1.5e-84 317.0 307 57.0
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 1.3e-83 313.9 318 55.0
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 2.2e-83 313.2 304 57.2
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 2.2e-83 313.2 284 58.1
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 2.2e-83 313.2 295 57.6
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 2.5e-82 309.7 313 53.7
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 3.2e-82 309.3 315 53.7
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 5.5e-82 308.5 296 55.7
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 2.1e-81 306.6 309 55.3
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 3.3e-79 299.3 298 58.4
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.7e-78 295.8 259 56.8
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 1.4e-77 293.9 298 56.7
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 1.8e-77 293.5 265 54.7
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 9.1e-77 291.2 301 55.5
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 8.0e-73 278.1 266 54.1
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 1.8e-72 276.9 258 55.0
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 3.0e-72 276.2 297 54.9
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.5e-71 273.9 298 54.0
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.8e-70 269.6 306 51.3
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 3.5e-68 262.7 311 49.2
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 4.5e-68 262.3 207 66.7
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 2.5e-66 256.5 305 48.2
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 3.6e-65 252.7 279 51.6
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 6.7e-64 248.4 297 50.5
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 4.8e-62 242.3 204 64.2
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.5e-58 230.7 302 48.3
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 1.9e-58 230.3 251 53.4
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 1.2e-55 221.1 236 52.1
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 5.2e-48 195.7 126 80.2
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 4.4e-47 192.6 277 43.3
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 8.3e-46 188.3 304 38.8
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 1.8e-45 187.2 271 42.1
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 1.6e-44 184.1 95 92.6
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 5.9e-44 182.2 187 50.8
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 3.3e-42 176.4 134 69.4
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 3.6e-41 172.9 207 44.9
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 8.0e-41 171.8 264 41.3
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 9.8e-39 164.9 301 38.2
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 5.4e-37 159.1 265 39.2
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.0e-35 154.8 298 37.9
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 3.0e-35 153.3 132 62.1
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 2.5e-34 150.2 265 37.0
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 6.2e-33 145.6 119 66.4
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 1.4e-32 144.4 124 62.9
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 1.9e-29 134.0 181 46.4
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 6.0e-28 129.0 304 32.2
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 5.1e-27 125.9 222 38.7
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 3.3e-26 123.2 120 57.5
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.3e-26 123.2 198 40.4
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 8.1e-25 118.6 151 44.4
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 1.8e-24 117.5 100 60.0
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 5.2e-24 115.9 126 53.2
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 8.9e-24 115.2 139 49.6
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.2e-23 114.8 158 45.6
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 4.7e-17 92.8 105 47.6
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 4.9e-14 82.8 99 50.5
Nn3g19050 Nelumbo nucifera HOM05D000974 ORTHO05D007456 1.4e-08 64.7 90 41.1
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 1.8e-08 64.3 64 53.1
COL.COLO4_02792 Corchorus olitorius HOM05D000974 ORTHO05D007456 7.6e-07 58.9 65 47.7


User provided reference genes

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