Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 1.8e-139 499.2 242 100.0
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 4.0e-107 391.7 253 77.5
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 1.5e-106 389.8 250 77.6
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 5.8e-106 387.9 250 79.2
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 5.8e-106 387.9 247 78.1
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 1.0e-102 377.1 252 74.2
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 1.3e-102 376.7 252 74.2
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 7.3e-101 370.9 225 78.2
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 1.6e-100 369.8 249 75.5
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 3.1e-99 365.5 252 74.6
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 4.0e-99 365.2 216 79.2
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 6.8e-99 364.4 233 76.4
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 8.9e-99 364.0 225 76.4
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.2e-98 363.6 233 76.0
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 2.0e-98 362.8 240 73.3
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 2.6e-98 362.5 216 79.2
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 7.6e-98 360.9 233 75.5
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 9.9e-98 360.5 227 77.1
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 9.9e-98 360.5 225 76.0
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 2.9e-97 359.0 226 74.8
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 2.9e-97 359.0 199 83.9
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 6.4e-97 357.8 240 72.5
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 8.3e-97 357.5 221 78.3
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 1.4e-96 356.7 218 76.1
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 2.4e-96 355.9 212 78.3
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 3.2e-96 355.5 218 77.5
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 7.1e-96 354.4 195 84.1
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 1.2e-95 353.6 196 82.1
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 1.2e-95 353.6 223 75.3
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 1.6e-95 353.2 240 72.5
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 2.1e-95 352.8 245 69.4
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 2.1e-95 352.8 226 74.8
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 3.5e-95 352.1 209 78.9
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 1.0e-94 350.5 228 73.2
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 1.7e-94 349.7 209 77.5
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 2.3e-94 349.4 196 80.6
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 5.1e-94 348.2 226 73.9
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 8.6e-94 347.4 211 76.3
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 1.1e-93 347.1 252 67.5
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 1.5e-93 346.7 218 77.1
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 1.9e-93 346.3 222 74.3
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 3.3e-93 345.5 234 75.6
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 3.3e-93 345.5 212 76.9
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 3.3e-93 345.5 195 80.5
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 3.3e-93 345.5 195 82.1
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 2.1e-92 342.8 231 71.9
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 2.1e-92 342.8 209 76.1
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 2.8e-92 342.4 198 78.3
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 2.8e-92 342.4 219 72.6
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 4.7e-92 341.7 224 71.9
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 6.2e-92 341.3 202 76.2
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 8.1e-92 340.9 249 69.1
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 1.1e-91 340.5 209 74.2
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 1.1e-91 340.5 221 73.8
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 6.8e-91 337.8 209 73.7
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 1.2e-90 337.0 209 73.2
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 1.5e-90 336.7 262 68.7
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 1.5e-90 336.7 208 75.5
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 2.0e-90 336.3 209 73.2
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 3.4e-90 335.5 220 70.5
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 5.8e-90 334.7 203 74.9
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 7.6e-90 334.3 197 78.2
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 9.9e-90 334.0 203 74.4
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 8.4e-89 330.9 200 78.0
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 8.4e-89 330.9 222 73.4
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 1.1e-88 330.5 202 74.8
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 1.4e-88 330.1 199 76.4
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 1.9e-88 329.7 243 67.5
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 3.2e-88 328.9 211 72.0
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 4.2e-88 328.6 201 76.6
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 7.1e-88 327.8 225 71.6
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 9.3e-88 327.4 235 67.7
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 2.7e-87 325.9 193 77.2
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 1.3e-86 323.6 198 76.3
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 9.6e-85 317.4 195 73.8
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 4.8e-84 315.1 199 72.9
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 6.2e-84 314.7 191 77.0
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.1e-83 313.9 229 67.2
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 7.6e-82 307.8 213 73.2
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 6.4e-81 304.7 211 69.2
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 2.4e-80 302.8 215 71.6
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 3.2e-80 302.4 204 73.0
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 5.4e-80 301.6 206 70.4
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 2.1e-79 299.7 183 76.0
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 3.9e-78 295.4 199 68.8
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.3e-76 290.4 218 67.9
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 3.6e-76 288.9 199 70.9
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 9.9e-74 280.8 199 63.8
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 1.4e-72 276.9 193 65.3
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 3.5e-71 272.3 177 67.8
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 6.7e-70 268.1 186 66.7
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 6.2e-68 261.5 185 68.6
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 1.8e-67 260.0 221 57.5
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.7e-65 253.4 207 62.8
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 3.2e-64 249.2 147 78.9
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 9.6e-61 237.7 190 65.8
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.5e-56 223.0 172 61.0
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.3e-54 217.2 205 57.1
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 2.3e-54 216.5 192 58.9
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 1.1e-51 207.6 200 50.5
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 5.3e-51 205.3 203 54.7
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 2.0e-50 203.4 137 70.8
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 5.1e-46 188.7 115 74.8
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 1.5e-42 177.2 200 49.5
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 8.5e-41 171.4 149 51.7
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 1.6e-39 167.2 103 70.9
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.8e-38 163.7 105 73.3
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 6.1e-31 138.7 220 43.2
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 1.8e-27 127.1 70 81.4
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 1.6e-26 124.0 71 81.7
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 6.8e-14 82.0 79 53.2


User provided reference genes

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