Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 1.3e-193 679.5 330 100.0
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 7.0e-179 630.6 327 91.7
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 1.7e-177 625.9 330 89.7
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 5.0e-177 624.4 330 90.3
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 8.5e-177 623.6 330 89.1
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 1.6e-175 619.4 330 88.2
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.6e-175 619.4 330 88.8
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 2.7e-175 618.6 330 88.8
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 3.6e-175 618.2 331 89.7
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 8.0e-175 617.1 330 87.9
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 4.0e-174 614.8 331 88.2
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 4.1e-171 604.7 330 87.3
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 5.9e-170 600.9 326 85.6
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 1.0e-169 600.1 327 84.4
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 5.0e-169 597.8 327 84.1
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 4.2e-168 594.7 326 84.4
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 7.2e-168 594.0 327 83.5
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 3.0e-166 588.6 327 83.2
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 4.0e-166 588.2 326 83.7
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 1.5e-165 586.3 338 83.1
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.6e-165 585.5 322 86.6
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 2.6e-165 585.5 322 86.6
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 2.8e-164 582.0 327 83.2
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 3.7e-164 581.6 327 83.2
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.4e-163 579.7 326 81.6
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 7.0e-163 577.4 327 82.0
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 2.7e-162 575.5 326 82.5
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 3.5e-162 575.1 327 81.7
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.0e-161 573.5 327 80.7
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 2.9e-161 572.0 326 81.0
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 5.0e-161 571.2 328 82.0
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 6.6e-161 570.9 326 80.4
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 1.9e-160 569.3 326 80.7
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 2.5e-160 568.9 327 80.1
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 6.1e-159 564.3 325 81.2
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 8.0e-159 563.9 328 80.8
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 1.4e-158 563.1 325 79.4
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 1.8e-158 562.8 326 78.8
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.3e-158 562.4 331 79.5
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 3.0e-158 562.0 328 79.6
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 4.0e-158 561.6 327 80.4
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 6.8e-158 560.8 325 79.7
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 6.8e-158 560.8 328 80.5
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 1.2e-157 560.1 325 80.0
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 2.6e-157 558.9 325 79.4
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 7.5e-157 557.4 307 82.7
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 9.8e-157 557.0 327 80.1
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 1.3e-156 556.6 326 78.2
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 2.2e-156 555.8 325 79.7
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 6.3e-156 554.3 326 77.0
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 2.4e-155 552.4 341 76.5
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 2.4e-155 552.4 341 76.5
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 3.1e-155 552.0 340 78.5
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 9.2e-155 550.4 329 76.0
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 9.2e-155 550.4 327 76.5
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 1.6e-154 549.7 338 76.9
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 3.5e-154 548.5 326 76.7
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 4.5e-154 548.1 325 79.1
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 7.8e-154 547.4 326 76.7
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 2.3e-153 545.8 325 77.5
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 6.6e-153 544.3 327 75.5
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 2.5e-152 542.3 330 74.2
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 1.6e-151 539.7 327 74.6
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 2.8e-151 538.9 318 78.0
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 3.6e-151 538.5 327 76.1
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 2.3e-150 535.8 326 78.8
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 2.3e-150 535.8 326 75.8
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 4.0e-150 535.0 324 76.2
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 2.9e-148 528.9 313 78.3
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 6.4e-148 527.7 329 73.9
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 2.4e-147 525.8 325 74.8
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 2.7e-146 522.3 327 72.8
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.3e-145 519.2 327 74.0
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 2.3e-145 519.2 318 75.8
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 3.9e-145 518.5 327 73.7
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 5.0e-145 518.1 327 73.1
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 1.1e-144 516.9 327 72.8
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 2.1e-143 512.7 327 72.5
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 5.2e-142 508.1 297 77.1
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 7.5e-141 504.2 326 73.6
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 9.8e-141 503.8 327 69.1
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 9.8e-141 503.8 327 70.9
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 7.0e-139 497.7 326 71.5
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 1.5e-136 490.0 315 71.1
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 1.2e-135 486.9 325 69.2
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.2e-135 486.9 310 73.2
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 6.2e-135 484.6 327 72.2
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.5e-128 463.4 325 65.5
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 2.5e-128 462.6 250 85.2
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 2.5e-128 462.6 325 65.2
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 1.2e-125 453.8 318 67.9
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 4.4e-125 451.8 252 82.9
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 3.8e-124 448.7 253 81.4
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 2.4e-123 446.0 253 80.6
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 3.9e-121 438.7 306 65.4
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 2.5e-120 436.0 329 60.5
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.3e-119 433.7 245 83.3
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 1.3e-119 433.7 326 65.0
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 1.8e-118 429.9 309 63.4
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 4.6e-114 415.2 276 69.6
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 4.3e-112 408.7 309 60.5
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 2.8e-111 406.0 317 57.7
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 2.0e-109 399.8 254 73.2
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 5.8e-101 371.7 218 81.7
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 1.0e-92 344.4 198 80.3
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 3.5e-90 335.9 312 52.6
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 1.9e-88 330.1 170 87.6
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 1.6e-61 240.7 144 81.9
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 3.5e-61 239.6 132 87.9
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 1.5e-48 197.6 109 80.7
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 1.5e-48 197.6 317 38.8
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 3.4e-48 196.4 143 58.0
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 5.4e-46 189.1 312 36.5
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 5.4e-38 162.5 305 32.5
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 2.9e-36 156.8 82 87.8
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 2.2e-31 140.6 109 57.8
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 6.4e-31 139.0 111 67.6
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 2.0e-29 134.0 78 83.3
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 2.5e-27 127.1 133 50.4
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 1.6e-26 124.4 72 80.6
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 9.8e-24 115.2 65 69.2
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 3.9e-20 103.2 58 77.6
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.6e-13 81.3 69 53.6
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.6e-10 71.2 61 59.0
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.6e-08 63.9 36 77.8
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.7e-07 61.2 40 62.5


User provided reference genes

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