Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 7.9e-152 540.4 275 100.0
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 1.5e-113 413.3 272 76.8
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 7.2e-113 411.0 276 75.4
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 2.1e-112 409.5 272 75.4
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 6.1e-112 407.9 276 76.8
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 5.2e-111 404.8 276 77.5
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 9.8e-110 400.6 276 76.8
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 1.3e-109 400.2 276 76.4
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 2.2e-109 399.4 276 76.8
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 3.5e-107 392.1 277 72.2
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 1.0e-106 390.6 277 71.8
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 1.7e-101 373.2 271 68.6
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.7e-101 373.2 272 68.8
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 6.3e-101 371.3 275 71.6
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 8.3e-101 370.9 280 68.2
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 1.4e-100 370.2 275 66.9
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 7.0e-100 367.9 275 69.1
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 9.2e-100 367.5 264 71.6
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 1.2e-99 367.1 269 69.1
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 2.0e-99 366.3 280 67.9
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 3.5e-99 365.5 280 67.5
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 4.6e-99 365.2 271 67.9
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 7.8e-99 364.4 274 67.2
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 2.3e-98 362.8 280 67.1
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 2.3e-98 362.8 280 67.1
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 8.6e-98 360.9 274 68.6
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 8.6e-98 360.9 274 67.5
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 1.1e-97 360.5 274 68.6
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 1.1e-97 360.5 274 68.6
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 1.5e-97 360.1 259 71.8
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 1.9e-97 359.8 271 65.7
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 3.3e-97 359.0 277 67.5
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 3.3e-97 359.0 273 67.4
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 4.3e-97 358.6 279 64.9
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 4.3e-97 358.6 275 67.6
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 5.6e-97 358.2 274 66.4
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 7.3e-97 357.8 272 68.8
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 9.5e-97 357.5 265 68.3
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 1.2e-96 357.1 273 66.3
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.6e-96 356.7 272 66.9
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.6e-96 356.7 272 66.9
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 3.6e-96 355.5 275 64.7
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 4.7e-96 355.1 274 67.9
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 6.1e-96 354.8 272 68.0
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 1.0e-95 354.0 272 68.0
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 1.8e-95 353.2 274 67.5
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 2.3e-95 352.8 293 64.5
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 2.3e-95 352.8 268 67.2
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 3.1e-95 352.4 272 68.4
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 3.1e-95 352.4 272 68.4
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 4.0e-95 352.1 268 67.2
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 4.0e-95 352.1 272 65.1
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 8.9e-95 350.9 272 68.0
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.2e-94 350.5 268 66.8
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 1.2e-94 350.5 273 68.1
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 2.2e-93 346.3 275 64.4
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 4.9e-93 345.1 275 66.5
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 6.4e-93 344.7 275 65.1
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 8.3e-93 344.4 274 65.3
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 2.4e-92 342.8 254 67.7
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 3.2e-92 342.4 266 66.2
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 4.1e-92 342.0 270 66.3
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 5.4e-92 341.7 262 66.8
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 2.0e-91 339.7 264 66.3
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.0e-91 339.7 277 65.3
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.0e-91 339.7 277 65.3
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 1.7e-90 336.7 264 66.3
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 2.3e-90 336.3 269 63.6
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 3.0e-90 335.9 272 64.3
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 6.6e-90 334.7 277 64.6
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 8.6e-90 334.3 344 55.8
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 1.9e-89 333.2 269 64.3
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 1.2e-88 330.5 265 64.2
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 3.6e-88 328.9 277 64.3
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 1.1e-87 327.4 273 59.3
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 2.3e-87 326.2 270 61.9
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 3.1e-87 325.9 269 63.6
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 6.8e-87 324.7 274 63.5
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 2.6e-86 322.8 269 62.5
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 7.5e-86 321.2 264 63.3
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 9.8e-86 320.9 266 62.0
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.4e-84 317.0 277 61.7
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 5.4e-84 315.1 267 61.0
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 8.6e-82 307.8 285 61.8
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 8.6e-82 307.8 272 55.9
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 5.6e-81 305.1 285 62.1
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 2.3e-79 299.7 263 61.6
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 5.4e-76 288.5 263 55.9
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 2.8e-72 276.2 273 52.7
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 3.4e-70 269.2 179 72.6
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 3.8e-69 265.8 180 68.9
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 9.3e-68 261.2 179 73.2
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 1.3e-66 257.3 173 72.3
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 1.4e-63 247.3 172 75.0
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 6.0e-59 231.9 136 80.1
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 9.6e-57 224.6 179 63.7
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 2.1e-56 223.4 170 64.7
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 6.2e-56 221.9 266 48.5
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 8.1e-56 221.5 171 65.5
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 1.4e-55 220.7 269 46.8
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 7.9e-51 204.9 272 45.2
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 6.2e-48 195.3 272 44.9
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 2.0e-46 190.3 154 65.6
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.0e-45 188.0 260 46.5
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 3.3e-41 172.9 215 48.8
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.1e-36 157.9 282 38.7
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 7.4e-33 145.2 272 37.1
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 9.0e-31 138.3 133 56.4
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 7.9e-27 125.2 78 75.6
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 3.3e-25 119.8 156 42.3
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 1.4e-23 114.4 92 62.0
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.5e-17 94.4 175 38.3
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 6.3e-16 89.0 75 64.0
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 8.2e-16 88.6 271 29.9
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.8e-15 87.4 65 60.0
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.5e-12 77.0 173 36.4
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 2.5e-12 77.0 80 56.2
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 2.0e-06 57.4 84 42.9
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 3.5e-06 56.6 72 45.8


User provided reference genes

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