Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0065701 Lupinus albus HOM05D005489 ORTHO05D006629 1.9e-98 362.5 177 100.0
Lalb_Chr08g0241711 Lupinus albus HOM05D005489 ORTHO05D006629 5.6e-74 281.2 136 97.1
arahy.Tifrunner.gnm1.ann1.204R5H Arachis hypogaea HOM05D005489 ORTHO05D006629 1.0e-72 276.9 136 94.1
arahy.Tifrunner.gnm1.ann1.64ZY3M Arachis hypogaea HOM05D005489 ORTHO05D006629 2.3e-72 275.8 136 93.4
Medtr3g073300 Medicago truncatula HOM05D005489 ORTHO05D006629 3.1e-72 275.4 136 93.4
Ca_25761_v3 Cicer arietinum L. HOM05D005489 ORTHO05D006629 5.2e-72 274.6 136 93.4
TPR.G32948 Trifolium pratense HOM05D005489 ORTHO05D006629 2.0e-71 272.7 136 91.9
Glyma.04G253700 Glycine max HOM05D005489 ORTHO05D006629 3.4e-71 271.9 136 92.6
Psat5g135600 Pisum sativum HOM05D005489 ORTHO05D006629 4.4e-71 271.6 136 91.9
Glyma.06G108600 Glycine max HOM05D005489 ORTHO05D006629 5.8e-71 271.2 136 92.6
Lj1g0000272 Lotus japonicus HOM05D005489 ORTHO05D006629 1.7e-70 269.6 136 92.6
VMungo1127G1458 Vigna mungo HOM05D005489 ORTHO05D006629 1.1e-69 266.9 136 91.2
Phvul.011G165300 Phaseolus vulgaris HOM05D005489 ORTHO05D006629 1.9e-69 266.2 136 90.4
THA.LOC104806808 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 1.6e-65 253.1 136 85.3
Ciclev10002818m.g Citrus clementina HOM05D005489 ORTHO05D006629 1.1e-64 250.4 136 83.8
PGSC0003DMG400027793 Solanum tuberosum HOM05D005489 ORTHO05D006629 1.1e-64 250.4 135 84.4
Thecc.08G116800 Theobroma cacao HOM05D005489 ORTHO05D006629 1.4e-64 250.0 136 84.6
TWI56G0906 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 1.4e-64 250.0 136 83.1
Gohir.A02G075000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.8e-64 249.6 136 85.3
PGR044G1289 Punica granatum HOM05D005489 ORTHO05D006629 1.8e-64 249.6 136 83.8
Carub.0001s3388 Capsella rubella HOM05D005489 ORTHO05D006629 4.0e-64 248.4 136 83.8
Duzib093G1687 Durio zibethinus HOM05D005489 ORTHO05D006629 4.0e-64 248.4 161 71.4
Manes.18G073000 Manihot esculenta HOM05D005489 ORTHO05D006629 5.2e-64 248.1 136 83.1
QL12p035283 Quercus lobata HOM05D005489 ORTHO05D006629 5.2e-64 248.1 135 83.0
Sopen11g008580 Solanum pennellii HOM05D005489 ORTHO05D006629 5.2e-64 248.1 135 83.7
A05p23180 Brassica napus HOM05D005489 ORTHO05D006629 6.8e-64 247.7 143 80.4
BraA05t21185Z Brassica rapa HOM05D005489 ORTHO05D006629 6.8e-64 247.7 143 80.4
COL.COLO4_32811 Corchorus olitorius HOM05D005489 ORTHO05D006629 6.8e-64 247.7 136 83.1
FvH4_5g38950 Fragaria vesca HOM05D005489 ORTHO05D006629 6.8e-64 247.7 136 83.1
FAN04G1587 Fragaria x ananassa HOM05D005489 ORTHO05D006629 6.8e-64 247.7 136 83.1
FAN08G2064 Fragaria x ananassa HOM05D005489 ORTHO05D006629 6.8e-64 247.7 136 83.1
FAN18G3455 Fragaria x ananassa HOM05D005489 ORTHO05D006629 6.8e-64 247.7 136 83.1
Gohir.A01G187700 Gossypium hirsutum HOM05D005489 ORTHO05D006629 8.9e-64 247.3 136 82.4
Gohir.D02G082100 Gossypium hirsutum HOM05D005489 ORTHO05D006629 8.9e-64 247.3 136 83.8
Hma1.2p1_0221F.1_g093180 Hydrangea macrophylla HOM05D005489 ORTHO05D006629 8.9e-64 247.3 136 83.8
Dinv26716 Davidia involucrata HOM05D005489 ORTHO05D006629 1.2e-63 246.9 136 82.4
Thhalv10005115m.g Eutrema salsugineum HOM05D005489 ORTHO05D006629 1.2e-63 246.9 136 82.4
Solyc11g013550.2 Solanum lycopersicum HOM05D005489 ORTHO05D006629 1.2e-63 246.9 135 83.0
THA.LOC104813132 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 1.2e-63 246.9 136 83.8
Aqoxy5G02479 Aquilegia oxysepala HOM05D005489 ORTHO05D006629 1.5e-63 246.5 136 83.8
BcaB03g13640 Brassica carinata HOM05D005489 ORTHO05D006629 2.0e-63 246.1 136 83.1
C05p36630 Brassica napus HOM05D005489 ORTHO05D006629 2.0e-63 246.1 136 83.1
CiPaw.05G228700 Carya illinoinensis HOM05D005489 ORTHO05D006629 2.0e-63 246.1 136 81.6
CAN.G255.20 Capsicum annuum HOM05D005489 ORTHO05D006629 2.6e-63 245.7 135 82.2
CARHR034780 Cardamine hirsuta HOM05D005489 ORTHO05D006629 3.4e-63 245.4 136 81.6
MELO3C022783.2 Cucumis melo HOM05D005489 ORTHO05D006629 3.4e-63 245.4 136 81.6
Sed0015736 Sechium edule HOM05D005489 ORTHO05D006629 3.4e-63 245.4 136 81.6
Atru.chr13.1318 Acer truncatum HOM05D005489 ORTHO05D006629 4.4e-63 245.0 136 82.4
Atru.chr13.1362 Acer truncatum HOM05D005489 ORTHO05D006629 4.4e-63 245.0 136 82.4
AL1G51120 Arabidopsis lyrata HOM05D005489 ORTHO05D006629 4.4e-63 245.0 136 82.4
AT1G36980 Arabidopsis thaliana HOM05D005489 ORTHO05D006629 4.4e-63 245.0 136 82.4
Gohir.A06G041000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 4.4e-63 245.0 136 81.6
Gohir.D06G041900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 4.4e-63 245.0 136 81.6
Gorai.010G047100 Gossypium raimondii HOM05D005489 ORTHO05D006629 4.4e-63 245.0 136 81.6
MD15G1359200 Malus domestica HOM05D005489 ORTHO05D006629 4.4e-63 245.0 136 82.4
GSVIVG01008943001 Vitis vinifera HOM05D005489 ORTHO05D006629 4.4e-63 245.0 136 81.6
Sp1g31180 Schrenkiella parvula HOM05D005489 ORTHO05D006629 5.8e-63 244.6 136 82.4
TWI12G0464 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 7.5e-63 244.2 136 81.6
Peaxi162Scf01011g00023 Petunia axillaris HOM05D005489 ORTHO05D006629 9.8e-63 243.8 135 83.7
Sabra02G0070300 Salix brachista HOM05D005489 ORTHO05D006629 1.7e-62 243.0 136 81.6
TAR628G1556 Trochodendron aralioides HOM05D005489 ORTHO05D006629 1.7e-62 243.0 136 80.9
CDE06G1809 Ceratophyllum demersum HOM05D005489 ORTHO05D006629 2.9e-62 242.3 136 80.1
Potri.002G089300 Populus trichocarpa HOM05D005489 ORTHO05D006629 2.9e-62 242.3 136 80.9
SalBow1G3581 Salvia bowleyana HOM05D005489 ORTHO05D006629 2.9e-62 242.3 133 83.5
RcHm_v2.0_Chr7g0240921 Rosa chinensis HOM05D005489 ORTHO05D006629 3.7e-62 241.9 136 79.4
Dinv27383 Davidia involucrata HOM05D005489 ORTHO05D006629 4.9e-62 241.5 136 80.9
HanXRQChr11g0326271 Helianthus annuus HOM05D005489 ORTHO05D006629 6.4e-62 241.1 136 80.9
Prupe.1G506000 Prunus persica HOM05D005489 ORTHO05D006629 6.4e-62 241.1 136 80.9
Lsat_1_v5_gn_4_135561 Lactuca sativa HOM05D005489 ORTHO05D006629 8.3e-62 240.7 136 81.6
SGA_v2.0_scaffold24G10504 Striga asiatica HOM05D005489 ORTHO05D006629 8.3e-62 240.7 137 79.6
Duzib041G0073 Durio zibethinus HOM05D005489 ORTHO05D006629 1.1e-61 240.4 136 80.9
HanXRQChr09g0260151 Helianthus annuus HOM05D005489 ORTHO05D006629 1.9e-61 239.6 135 80.7
SGA_v2.0_scaffold118G32436 Striga asiatica HOM05D005489 ORTHO05D006629 1.9e-61 239.6 136 80.1
MSTRG.1486 Avicennia marina HOM05D005489 ORTHO05D006629 2.4e-61 239.2 136 80.1
Migut.C01190 Erythranthe guttata HOM05D005489 ORTHO05D006629 5.4e-61 238.0 136 78.7
TAR197G0004 Trochodendron aralioides HOM05D005489 ORTHO05D006629 5.4e-61 238.0 136 79.4
PSO017G5790 Papaver somniferum HOM05D005489 ORTHO05D006629 7.1e-61 237.7 136 80.1
PSO170G3859 Papaver somniferum HOM05D005489 ORTHO05D006629 7.1e-61 237.7 136 80.1
Potri.005G171901 Populus trichocarpa HOM05D005489 ORTHO05D006629 9.2e-61 237.3 136 79.4
ECA232G0625 Erigeron canadensis HOM05D005489 ORTHO05D006629 1.6e-60 236.5 138 79.7
EL10Ac1g00039 Beta vulgaris HOM05D005489 ORTHO05D006629 2.1e-60 236.1 136 78.7
Nn5g27958 Nelumbo nucifera HOM05D005489 ORTHO05D006629 4.6e-60 235.0 139 77.0
Nn1g08538 Nelumbo nucifera HOM05D005489 ORTHO05D006629 1.3e-59 233.4 135 76.3
Migut.N03320 Erythranthe guttata HOM05D005489 ORTHO05D006629 3.9e-59 231.9 136 80.1
Nitab4.5_0000051g0120 Nicotiana tabacum HOM05D005489 ORTHO05D006629 5.1e-59 231.5 132 82.6
MBI06_g01046_MAGBIO Magnolia biondii HOM05D005489 ORTHO05D006629 5.6e-58 228.0 135 76.3
Aa31LG6G9070 Aethionema arabicum HOM05D005489 ORTHO05D006629 7.3e-58 227.6 124 83.9
Oeu032962.1 Olea europaea HOM05D005489 ORTHO05D006629 1.6e-57 226.5 136 77.9
Oeu043793.1 Olea europaea HOM05D005489 ORTHO05D006629 4.7e-57 224.9 138 74.6
Gorai.002G220400 Gossypium raimondii HOM05D005489 ORTHO05D006629 6.2e-57 224.6 132 77.3
Nitab4.5_0002332g0020 Nicotiana tabacum HOM05D005489 ORTHO05D006629 1.4e-56 223.4 127 81.9
Hund16821 Selenicereus undatus HOM05D005489 ORTHO05D006629 6.8e-56 221.1 129 76.7
Sc01g0001550 Simmondsia chinensis HOM05D005489 ORTHO05D006629 2.0e-55 219.5 124 79.0
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.6e-55 219.2 130 78.5
DCAR_014792 Daucus carota HOM05D005489 ORTHO05D006629 3.4e-55 218.8 131 74.8
Zm00001eb100550 Zea mays HOM05D005489 ORTHO05D006629 4.4e-55 218.4 134 75.4
Zm00001eb244520 Zea mays HOM05D005489 ORTHO05D006629 4.4e-55 218.4 136 70.6
Rhsim06G0109100 Rhododendron simsii HOM05D005489 ORTHO05D006629 9.9e-55 217.2 124 79.8
HPP92_002297 Vanilla planifolia HOM05D005489 ORTHO05D006629 9.9e-55 217.2 135 71.9
Os02g0566900 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 2.2e-54 216.1 133 70.7
HPP92_005944 Vanilla planifolia HOM05D005489 ORTHO05D006629 2.4e-53 212.6 133 69.9
Os09g0453000 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 3.2e-53 212.2 134 73.1
Cc10_g10440 Coffea canephora HOM05D005489 ORTHO05D006629 4.1e-53 211.8 124 83.1
Gohir.D01G181900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 4.1e-53 211.8 124 79.0
SEGI_34511 Sequoiadendron giganteum HOM05D005489 ORTHO05D006629 1.2e-52 210.3 136 72.1
unitig_747.g21477 Utricularia gibba HOM05D003597 ORTHO05D004420 1.0e-51 207.2 207 52.2
Actinidia29431 Actinidia chinensis HOM05D005489 ORTHO05D006629 8.6e-51 204.1 133 68.4
AagrBONN_evm.TU.Sc2ySwM_344.2049 Anthoceros agrestis HOM05D005489 ORTHO05D006629 1.1e-50 203.8 129 68.2
BolC5t32398H Brassica oleracea HOM05D005489 ORTHO05D006629 1.6e-49 199.9 120 79.2
BcaC05g27681 Brassica carinata HOM05D005489 ORTHO05D006629 1.4e-48 196.8 120 76.7
SMO116G0262 Selaginella moellendorffii HOM05D005489 ORTHO05D006629 1.4e-48 196.8 129 68.2
Pp3c1_10200 Physcomitrium patens HOM05D005489 ORTHO05D006629 3.8e-46 188.7 134 62.7
Pp3c2_28270 Physcomitrium patens HOM05D005489 ORTHO05D006629 1.4e-45 186.8 134 62.7
Mapoly0004s0020 Marchantia polymorpha HOM05D005489 ORTHO05D006629 2.4e-45 186.0 147 61.2
CBR_g30829 Chara braunii HOM05D005489 ORTHO05D006629 7.3e-42 174.5 128 60.9
Gorai.005G092000 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.1e-40 170.6 92 87.0
Sabra05G0129400 Salix brachista HOM05D005489 ORTHO05D006629 1.3e-38 163.7 125 67.2
CANSAT25G2554 Cannabis sativa HOM05D005489 ORTHO05D006629 1.1e-34 150.6 85 76.5
Haze_00523 Corylus avellana HOM05D005489 ORTHO05D006629 1.3e-33 147.1 76 84.2
BcaC05g27682 Brassica carinata HOM05D005489 ORTHO05D006629 2.1e-33 146.4 74 86.5
C05p36640 Brassica napus HOM05D005489 ORTHO05D006629 2.1e-33 146.4 74 86.5
Cfa015959 Carpinus fangiana HOM05D005489 ORTHO05D006629 1.1e-32 144.1 131 57.3
ClCG03G009110 Citrullus lanatus HOM05D005489 ORTHO05D006629 3.1e-32 142.5 74 82.4
CsaV3_5G023520 Cucumis sativus L. HOM05D005489 ORTHO05D006629 3.1e-32 142.5 74 82.4
TAR127G0005 Trochodendron aralioides HOM05D005489 ORTHO05D006629 6.9e-32 141.4 75 80.0
DCAR_023128 Daucus carota HOM05D005489 ORTHO05D006629 2.0e-31 139.8 75 78.7
ATR0121G008 Amborella trichopoda HOM05D005489 ORTHO05D006629 8.4e-30 134.4 74 78.4
Nn2g15248 Nelumbo nucifera HOM05D005489 ORTHO05D006629 8.7e-27 124.4 73 72.6
Oeu050268.1 Olea europaea HOM05D005489 ORTHO05D006629 8.7e-27 124.4 76 76.3
AUR62004694 Chenopodium quinoa HOM05D005489 ORTHO05D006629 3.3e-26 122.5 140 50.7
Cre01.g042950 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 2.1e-25 119.8 129 41.9
Sopen11g008620 Solanum pennellii HOM05D000147 ORTHO05D004360 7.6e-23 111.3 72 73.6
PRCOL_00003843 Prasinoderma coloniale HOM05D005489 ORTHO05D006629 8.7e-19 97.8 117 45.3
ClCG03G009140 Citrullus lanatus HOM05D005489 ORTHO05D006629 4.5e-15 85.5 50 82.0
Eucgr.F04378 Eucalyptus grandis HOM05D005489 ORTHO05D006629 3.8e-14 82.4 47 72.3
Cre03.g159300 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 2.5e-13 79.7 124 33.1
SalBow7G4082 Salvia bowleyana HOM05D005489 ORTHO05D006629 3.2e-13 79.3 165 36.4
Solyc11g013660.1 Solanum lycopersicum HOM05D005489 ORTHO05D006629 1.5e-10 70.5 70 55.7
Os08g0469200 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 4.8e-09 65.5 67 49.3
SalBow7G1125 Salvia bowleyana HOM05D002998 ORTHO05D006629 3.1e-08 62.8 36 72.2
PRCOL_00003098 Prasinoderma coloniale HOM05D001685 ORTHO05D007488 1.7e-06 57.0 128 32.8


User provided reference genes

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