Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0065591 Lupinus albus HOM05D003898 ORTHO05D004642 8.3e-185 650.2 324 100.0
Lalb_Chr08g0241771 Lupinus albus HOM05D003898 ORTHO05D004642 1.1e-165 586.6 319 91.2
Glyma.06G107500 Glycine max HOM05D003898 ORTHO05D004642 4.3e-149 531.6 316 82.9
Medtr4g112080 Medicago truncatula HOM05D003898 ORTHO05D004642 3.1e-147 525.4 319 81.2
VMungo1309G1855 Vigna mungo HOM05D003898 ORTHO05D004642 9.0e-147 523.9 324 80.6
TPR.G32957 Trifolium pratense HOM05D003898 ORTHO05D004642 2.6e-146 522.3 321 81.0
Ca_02530_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 4.9e-145 518.1 323 80.2
TPR.G26798 Trifolium pratense HOM05D003898 ORTHO05D004642 8.4e-145 517.3 324 80.2
Phvul.009G026700 Phaseolus vulgaris HOM05D003898 ORTHO05D004642 1.4e-144 516.5 324 79.6
Psat5g107440 Pisum sativum HOM05D003898 ORTHO05D004642 1.9e-144 516.2 326 79.8
Lj1g0002951 Lotus japonicus HOM05D003898 ORTHO05D004642 7.9e-143 510.8 324 80.9
Glyma.04G254600 Glycine max HOM05D003898 ORTHO05D004642 5.1e-142 508.1 325 79.7
Medtr3g073550 Medicago truncatula HOM05D003898 ORTHO05D004642 1.2e-138 496.9 324 77.8
arahy.Tifrunner.gnm1.ann1.K1QIEY Arachis hypogaea HOM05D003898 ORTHO05D004642 1.8e-131 473.0 368 69.8
arahy.Tifrunner.gnm1.ann1.PF76WK Arachis hypogaea HOM05D003898 ORTHO05D004642 1.4e-126 456.8 274 82.5
arahy.Tifrunner.gnm1.ann1.HG05DD Arachis hypogaea HOM05D003898 ORTHO05D004642 1.1e-125 453.8 293 77.8
arahy.Tifrunner.gnm1.ann1.Z23D3B Arachis hypogaea HOM05D003898 ORTHO05D004642 5.7e-125 451.4 283 80.9
Manes.02G157700 Manihot esculenta HOM05D003898 ORTHO05D004642 1.3e-124 450.3 319 69.0
Cpa.g.sc49.114 Carica papaya HOM05D003898 ORTHO05D004642 1.7e-124 449.9 327 68.2
QL12p035494 Quercus lobata HOM05D003898 ORTHO05D004642 3.7e-124 448.7 321 68.2
Thecc.08G115200 Theobroma cacao HOM05D003898 ORTHO05D004642 1.5e-122 443.4 316 67.7
Potri.002G090500 Populus trichocarpa HOM05D003898 ORTHO05D004642 1.3e-121 440.3 322 67.1
TAR625G0437 Trochodendron aralioides HOM05D003898 ORTHO05D004642 2.9e-121 439.1 325 68.0
CiPaw.06G023700 Carya illinoinensis HOM05D003898 ORTHO05D004642 3.8e-121 438.7 322 66.8
RcHm_v2.0_Chr7g0240421 Rosa chinensis HOM05D003898 ORTHO05D004642 3.2e-120 435.6 312 67.9
COL.COLO4_16517 Corchorus olitorius HOM05D003898 ORTHO05D004642 1.6e-119 433.3 315 67.3
CSS0048138 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 2.1e-119 433.0 322 68.0
Potri.005G170600 Populus trichocarpa HOM05D003898 ORTHO05D004642 2.1e-119 433.0 322 67.1
Prupe.1G507900 Prunus persica HOM05D003898 ORTHO05D004642 3.6e-119 432.2 323 66.3
Sabra02G0071500 Salix brachista HOM05D003898 ORTHO05D004642 8.0e-119 431.0 338 64.2
Duzib093G1469 Durio zibethinus HOM05D003898 ORTHO05D004642 1.8e-118 429.9 315 66.7
Gorai.002G220000 Gossypium raimondii HOM05D003898 ORTHO05D004642 3.9e-118 428.7 314 68.8
PGR044G1262 Punica granatum HOM05D003898 ORTHO05D004642 3.9e-118 428.7 324 66.7
CiPaw.05G230800 Carya illinoinensis HOM05D003898 ORTHO05D004642 6.7e-118 427.9 322 65.5
Ciclev10005436m.g Citrus clementina HOM05D003898 ORTHO05D004642 6.7e-118 427.9 313 68.4
Nitab4.5_0000425g0260 Nicotiana tabacum HOM05D003898 ORTHO05D004642 6.7e-118 427.9 321 65.7
Sc16g0001430 Simmondsia chinensis HOM05D003898 ORTHO05D004642 8.8e-118 427.6 322 64.9
MD08G1174000 Malus domestica HOM05D003898 ORTHO05D004642 2.0e-117 426.4 322 66.5
CANSAT25G0948 Cannabis sativa HOM05D003898 ORTHO05D004642 3.3e-117 425.6 318 67.0
Gohir.D01G182400 Gossypium hirsutum HOM05D003898 ORTHO05D004642 3.3e-117 425.6 312 68.6
Dinv13069 Davidia involucrata HOM05D003898 ORTHO05D004642 9.7e-117 424.1 327 66.4
MSTRG.24959 Avicennia marina HOM05D003898 ORTHO05D004642 2.2e-116 422.9 320 66.2
FvH4_5g38420 Fragaria vesca HOM05D003898 ORTHO05D004642 2.8e-116 422.5 310 66.8
Gohir.A01G187300 Gossypium hirsutum HOM05D003898 ORTHO05D004642 2.8e-116 422.5 303 69.6
RcHm_v2.0_Chr1g0340891 Rosa chinensis HOM05D003898 ORTHO05D004642 2.8e-116 422.5 323 65.0
Solyc12g056840.2 Solanum lycopersicum HOM05D003898 ORTHO05D004642 2.8e-116 422.5 302 68.2
CSS0037064 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 4.8e-116 421.8 321 66.4
Sopen12g029520 Solanum pennellii HOM05D003898 ORTHO05D004642 6.3e-116 421.4 302 67.9
Migut.C00215 Erythranthe guttata HOM05D003898 ORTHO05D004642 2.4e-115 419.5 316 65.5
ECA246G0783 Erigeron canadensis HOM05D003898 ORTHO05D004642 3.1e-115 419.1 329 64.4
Aqoxy2G00480 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 5.3e-115 418.3 323 64.1
PGSC0003DMG401016958 Solanum tuberosum HOM05D003898 ORTHO05D004642 1.2e-114 417.2 302 67.2
GSVIVG01008958001 Vitis vinifera HOM05D003898 ORTHO05D004642 2.6e-114 416.0 322 65.2
vmacro04776 Vaccinium macrocarpon HOM05D003898 ORTHO05D004642 3.5e-114 415.6 327 64.8
Rhsim07G0198900 Rhododendron simsii HOM05D003898 ORTHO05D004642 7.7e-114 414.5 330 64.5
FvH4_7g08221 Fragaria vesca HOM05D003898 ORTHO05D004642 1.0e-113 414.1 312 65.7
HanXRQChr05g0162311 Helianthus annuus HOM05D003898 ORTHO05D004642 1.3e-113 413.7 322 65.5
THA.LOC104813137 Tarenaya hassleriana HOM05D003898 ORTHO05D004642 1.7e-113 413.3 312 66.3
SGA_v2.0_scaffold11G05890 Striga asiatica HOM05D003898 ORTHO05D004642 2.9e-113 412.5 320 65.3
EL10Ac6g15432 Beta vulgaris HOM05D003898 ORTHO05D004642 3.8e-113 412.1 302 66.9
CARHR012640 Cardamine hirsuta HOM05D003898 ORTHO05D004642 1.1e-112 410.6 309 66.3
Peaxi162Scf00160g01643 Petunia axillaris HOM05D003898 ORTHO05D004642 1.5e-112 410.2 323 63.8
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 4.2e-112 408.7 327 64.5
DCAR_028260 Daucus carota HOM05D003898 ORTHO05D004642 5.5e-112 408.3 317 64.4
TWI12G0005 Tripterygium wilfordii HOM05D003898 ORTHO05D004642 5.5e-112 408.3 320 64.4
HanXRQChr01g0001161 Helianthus annuus HOM05D003898 ORTHO05D004642 1.2e-111 407.1 322 64.6
Carub.0001s1201 Capsella rubella HOM05D003898 ORTHO05D004642 2.7e-111 406.0 310 64.5
Lsat_1_v5_gn_9_70200 Lactuca sativa HOM05D003898 ORTHO05D004642 6.1e-111 404.8 306 66.0
Sed0026073 Sechium edule HOM05D003898 ORTHO05D004642 1.4e-110 403.7 316 62.0
CAN.G47.19 Capsicum annuum HOM05D003898 ORTHO05D004642 1.8e-110 403.3 346 60.1
PSO210G6710 Papaver somniferum HOM05D003898 ORTHO05D004642 5.2e-110 401.7 325 62.8
Haze_00543 Corylus avellana HOM05D003898 ORTHO05D004642 1.2e-109 400.6 348 59.8
A10p33510 Brassica napus HOM05D003898 ORTHO05D004642 3.4e-109 399.1 311 63.0
CDE10G0849 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 3.4e-109 399.1 321 63.6
C09p74420 Brassica napus HOM05D003898 ORTHO05D004642 4.4e-109 398.7 309 64.1
MELO3C011378.2 Cucumis melo HOM05D003898 ORTHO05D004642 4.4e-109 398.7 309 62.5
PSO447G0107 Papaver somniferum HOM05D003898 ORTHO05D004642 4.4e-109 398.7 325 62.2
Aa31LG9G14440 Aethionema arabicum HOM05D003898 ORTHO05D004642 5.7e-109 398.3 292 68.2
Cfa015947 Carpinus fangiana HOM05D003898 ORTHO05D004642 7.5e-109 397.9 272 70.6
Cc10_g06070 Coffea canephora HOM05D003898 ORTHO05D004642 7.5e-109 397.9 275 69.8
ClCG08G010840 Citrullus lanatus HOM05D003898 ORTHO05D004642 9.7e-109 397.5 328 61.0
FAN13G1941 Fragaria x ananassa HOM05D003898 ORTHO05D004642 1.3e-108 397.1 351 60.1
Lj4C109T16 Lonicera japonica HOM05D003898 ORTHO05D004642 1.3e-108 397.1 353 60.9
CsaV3_6G035700 Cucumis sativus L. HOM05D003898 ORTHO05D004642 3.7e-108 395.6 309 62.8
TAR381G1034 Trochodendron aralioides HOM05D003898 ORTHO05D004642 3.7e-108 395.6 276 71.4
Thhalv10014147m.g Eutrema salsugineum HOM05D003898 ORTHO05D004642 6.3e-108 394.8 310 63.2
Nitab4.5_0006745g0040 Nicotiana tabacum HOM05D003898 ORTHO05D004642 6.3e-108 394.8 391 54.5
BraA02t04709Z Brassica rapa HOM05D003898 ORTHO05D004642 8.3e-108 394.4 315 63.5
BcaNung04450 Brassica carinata HOM05D003898 ORTHO05D004642 1.1e-107 394.0 309 63.4
CANSAT01G0632 Cannabis sativa HOM05D003898 ORTHO05D004642 1.1e-107 394.0 309 66.7
Sp6g40350 Schrenkiella parvula HOM05D003898 ORTHO05D004642 2.4e-107 392.9 309 64.1
AT1G12350 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 5.3e-107 391.7 310 63.5
FAN08G2468 Fragaria x ananassa HOM05D003898 ORTHO05D004642 5.3e-107 391.7 331 61.0
Sopen04g028670 Solanum pennellii HOM05D003898 ORTHO05D004642 2.7e-106 389.4 321 58.9
BolC9t60175H Brassica oleracea HOM05D003898 ORTHO05D004642 4.5e-106 388.7 309 63.1
CAN.G617.2 Capsicum annuum HOM05D003898 ORTHO05D004642 7.7e-106 387.9 322 58.4
Lsat_1_v5_gn_6_68860 Lactuca sativa HOM05D003898 ORTHO05D004642 1.3e-105 387.1 272 70.2
BraA10t45381Z Brassica rapa HOM05D003898 ORTHO05D004642 1.7e-105 386.7 337 58.8
AUR62019012 Chenopodium quinoa HOM05D003898 ORTHO05D004642 2.9e-105 386.0 308 63.6
C02p00370 Brassica napus HOM05D003898 ORTHO05D004642 2.5e-104 382.9 308 62.3
AL1G23670 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 9.4e-104 380.9 310 62.3
BcaNung06026 Brassica carinata HOM05D003898 ORTHO05D004642 4.7e-103 378.6 308 61.4
AUR62027853 Chenopodium quinoa HOM05D003898 ORTHO05D004642 1.4e-102 377.1 307 62.9
Solyc04g072480.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 6.8e-102 374.8 351 55.3
Oeu038191.1 Olea europaea HOM05D003898 ORTHO05D004642 7.5e-101 371.3 293 64.5
FAN01G1002 Fragaria x ananassa HOM05D000001 ORTHO05D000003 4.8e-100 368.6 324 60.5
SEGI_30417 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 5.4e-99 365.2 313 60.4
Os02g0575200 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 9.5e-96 354.4 313 57.8
Zm00001eb182920 Zea mays HOM05D003898 ORTHO05D004642 9.5e-96 354.4 307 59.0
RcHm_v2.0_Chr1g0340911 Rosa chinensis HOM05D003898 ORTHO05D004642 8.0e-95 351.3 265 66.8
SalBow7G2097 Salvia bowleyana HOM05D003898 ORTHO05D004642 1.0e-94 350.9 325 56.6
Nitab4.5_0001307g0170 Nicotiana tabacum HOM05D003898 ORTHO05D004642 2.6e-93 346.3 326 55.5
HPP92_006004 Vanilla planifolia HOM05D003898 ORTHO05D004642 5.7e-93 345.1 324 55.9
Pp3c11_3000 Physcomitrium patens HOM05D003898 ORTHO05D004642 2.8e-92 342.8 308 55.2
FvH4_5g38402 Fragaria vesca HOM05D003898 ORTHO05D004642 3.7e-92 342.4 238 67.2
Os08g0176100 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 3.7e-92 342.4 315 56.5
Mapoly0004s0284 Marchantia polymorpha HOM05D003898 ORTHO05D004642 2.0e-90 336.7 311 56.3
Zm00001eb414730 Zea mays HOM05D003898 ORTHO05D004642 2.7e-90 336.3 322 55.6
CSS0031031 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 9.5e-88 327.8 273 62.3
Solyc10g011840.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 3.6e-87 325.9 322 52.2
Nn1g05207 Nelumbo nucifera HOM05D003898 ORTHO05D004642 1.1e-83 314.3 247 61.1
MD15G1360400 Malus domestica HOM05D003898 ORTHO05D004642 2.5e-80 303.1 227 67.0
Duzib116G0208 Durio zibethinus HOM05D003898 ORTHO05D004642 9.5e-80 301.2 315 52.7
FAN06G3434 Fragaria x ananassa HOM05D000001 ORTHO05D000003 4.7e-79 298.9 323 51.1
ATR0564G227 Amborella trichopoda HOM05D003898 ORTHO05D004642 4.4e-77 292.4 232 62.5
SalBow1G7967 Salvia bowleyana HOM05D003898 ORTHO05D004642 6.6e-73 278.5 300 50.3
AL6G11300 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 8.6e-73 278.1 203 68.0
SMO137G0130 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 4.0e-70 269.2 308 49.0
Psat4g046560 Pisum sativum HOM05D003898 ORTHO05D011365 5.8e-69 265.4 174 78.2
ClCG08G002640 Citrullus lanatus HOM05D003898 ORTHO05D004642 7.6e-69 265.0 460 39.3
Ca_25770_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 2.4e-62 243.4 165 75.2
Atru.chr13.1300 Acer truncatum HOM05D003898 ORTHO05D004642 1.7e-60 237.3 173 69.4
CDE10G0276 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 2.2e-60 236.9 164 68.9
AT5G02080 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 4.9e-60 235.7 195 61.0
PRCOL_00003493 Prasinoderma coloniale HOM05D003898 ORTHO05D004642 5.4e-59 232.3 357 41.7
FAN04G1035 Fragaria x ananassa HOM05D003898 ORTHO05D004642 7.1e-59 231.9 210 59.5
SMO137G0020 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 2.1e-58 230.3 268 50.0
PGSC0003DMG400027542 Solanum tuberosum HOM05D003898 ORTHO05D004642 4.6e-58 229.2 187 59.9
AagrBONN_evm.TU.Sc2ySwM_344.1574 Anthoceros agrestis HOM05D003898 ORTHO05D004642 1.9e-56 223.8 198 56.1
Dinv44720 Davidia involucrata HOM05D003898 ORTHO05D004642 2.5e-56 223.4 180 64.4
BolC2t06037H Brassica oleracea HOM05D003898 ORTHO05D004642 4.8e-55 219.2 170 63.5
Cre01.g048050 Chlamydomonas reinhardtii HOM05D003898 ORTHO05D004642 1.5e-53 214.2 317 42.3
DCAR_027594 Daucus carota HOM05D003898 ORTHO05D004642 1.5e-53 214.2 216 53.7
Sopen10g005660 Solanum pennellii HOM05D003898 ORTHO05D004642 2.4e-51 206.8 221 48.4
SMO137G0337 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 2.3e-49 200.3 227 49.3
Eucgr.F04382 Eucalyptus grandis HOM05D003898 ORTHO05D004642 3.9e-49 199.5 150 66.7
MCO09G707 Micromonas commoda HOM05D003898 ORTHO05D004642 6.6e-49 198.7 286 43.4
Nitab4.5_0000553g0060 Nicotiana tabacum HOM05D003898 ORTHO05D004642 2.1e-47 193.7 283 41.7
Atru.chr13.1301 Acer truncatum HOM05D003898 ORTHO05D004642 4.5e-45 186.0 139 63.3
Lj4C710T9 Lonicera japonica HOM05D003898 ORTHO05D004642 8.4e-44 181.8 138 68.1
arahy.Tifrunner.gnm1.ann1.Z5SK82 Arachis hypogaea HOM05D003898 ORTHO05D004642 5.4e-43 179.1 182 56.6
unitig_32.g11143 Utricularia gibba HOM05D003898 ORTHO05D004642 1.6e-42 177.6 132 65.9
Cfa024377 Carpinus fangiana HOM05D003898 ORTHO05D004642 2.7e-42 176.8 328 39.3
FAN18G1940 Fragaria x ananassa HOM05D003898 ORTHO05D004642 2.7e-42 176.8 195 51.8
CBR_g9000 Chara braunii HOM05D003898 ORTHO05D004642 2.1e-39 167.2 167 49.7
Atru.chr4.493 Acer truncatum HOM05D003898 ORTHO05D004642 5.3e-38 162.5 121 62.8
Atru.chr1.2069 Acer truncatum HOM05D003898 ORTHO05D004642 4.5e-37 159.5 116 64.7
SEGI_10597 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 5.8e-37 159.1 149 58.4
arahy.Tifrunner.gnm1.ann1.N7W281 Arachis hypogaea HOM05D003898 ORTHO05D004642 1.9e-35 154.1 143 60.8
Duzib041G0680 Durio zibethinus HOM05D003898 ORTHO05D004642 6.5e-28 129.0 106 62.3
unitig_32.g11144 Utricularia gibba HOM05D003898 ORTHO05D004642 2.5e-24 117.1 116 55.2
CBR_g9001 Chara braunii HOM05D003898 ORTHO05D004642 2.8e-23 113.6 118 54.2
Aqoxy480s002 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 1.2e-21 108.2 125 45.6
arahy.Tifrunner.gnm1.ann1.9J7JQ6 Arachis hypogaea HOM05D003898 ORTHO05D004642 3.4e-21 106.7 62 82.3
arahy.Tifrunner.gnm1.ann1.KW4E90 Arachis hypogaea HOM05D003898 ORTHO05D004642 3.7e-15 86.7 97 52.6
QL02p062685 Quercus lobata HOM05D003898 ORTHO05D004642 1.4e-14 84.7 80 55.0
QL10p044069 Quercus lobata HOM05D003898 ORTHO05D004642 9.1e-14 82.0 80 53.8
Ah.05g170600 Amaranthus hybridus HOM05D003898 ORTHO05D004642 7.7e-13 79.0 93 45.2
Peaxi162Scf00756g00110 Petunia axillaris HOM05D003898 ORTHO05D004642 3.6e-10 70.1 88 43.2
QL10p009819 Quercus lobata HOM05D003898 ORTHO05D004642 1.8e-09 67.8 62 54.8
Aqoxy5G01116 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 5.1e-09 66.2 45 68.9
QL08p011560 Quercus lobata HOM05D003898 ORTHO05D004642 4.4e-08 63.2 62 53.2
arahy.Tifrunner.gnm1.ann1.YUT84C Arachis hypogaea HOM05D003898 ORTHO05D004642 1.8e-06 57.8 40 70.0
Gohir.D02G117850 Gossypium hirsutum HOM05D034602 ORTHO05D048040 3.1e-06 57.0 36 69.4
TPR.G17539 Trifolium pratense HOM05D003898 ORTHO05D411187 3.1e-06 57.0 37 67.6
Atru.chr5.2810 Acer truncatum HOM05D003898 ORTHO05D004642 4.1e-06 56.6 56 48.2
arahy.Tifrunner.gnm1.ann1.IKUR0B Arachis hypogaea HOM05D003898 ORTHO05D086768 4.1e-06 56.6 45 64.4
Gorai.007G225200 Gossypium raimondii HOM05D034602 ORTHO05D048040 7.0e-06 55.8 34 73.5
arahy.Tifrunner.gnm1.ann1.8FT8UW Arachis hypogaea HOM05D003898 ORTHO05D000721 9.1e-06 55.5 46 67.4
arahy.Tifrunner.gnm1.ann1.JWT6XR Arachis hypogaea HOM05D003898 ORTHO05D004642 9.1e-06 55.5 46 67.4


User provided reference genes

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