Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0065491 Lupinus albus HOM05D003923 ORTHO05D004553 1.2e-181 639.8 341 100.0
Lalb_Chr08g0241981 Lupinus albus HOM05D003923 ORTHO05D004553 3.1e-129 465.7 359 74.9
QL12p036407 Quercus lobata HOM05D003923 ORTHO05D004553 2.6e-96 356.3 376 55.6
Medtr3g074210 Medicago truncatula HOM05D003923 ORTHO05D004553 5.5e-94 348.6 367 60.8
Phvul.009G029900 Phaseolus vulgaris HOM05D003923 ORTHO05D004553 7.1e-94 348.2 360 63.3
Lj1g0006284 Lotus japonicus HOM05D003923 ORTHO05D004553 7.9e-93 344.7 365 59.2
Psat5g138360 Pisum sativum HOM05D003923 ORTHO05D004553 1.8e-92 343.6 368 60.1
Haze_22250 Corylus avellana HOM05D003923 ORTHO05D004553 5.1e-92 342.0 358 62.3
CiPaw.07G181200 Carya illinoinensis HOM05D003923 ORTHO05D004553 6.7e-92 341.7 360 59.7
CiPaw.08G044000 Carya illinoinensis HOM05D003923 ORTHO05D004553 1.3e-90 337.4 355 61.1
Gohir.A05G227800 Gossypium hirsutum HOM05D003923 ORTHO05D004553 4.8e-90 335.5 375 54.7
TWI56G0888 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 1.4e-89 334.0 366 60.9
TPR.G35206 Trifolium pratense HOM05D003923 ORTHO05D004553 2.4e-89 333.2 373 55.2
Cfa013623 Carpinus fangiana HOM05D003923 ORTHO05D004553 3.1e-89 332.8 359 60.7
Glyma.06G104700 Glycine max HOM05D003923 ORTHO05D004553 9.0e-89 331.3 366 62.6
Gorai.009G238400 Gossypium raimondii HOM05D003923 ORTHO05D004553 2.6e-88 329.7 367 55.3
CSS0021337 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 8.5e-87 324.7 360 56.9
Gohir.D05G230200 Gossypium hirsutum HOM05D003923 ORTHO05D004553 8.5e-87 324.7 366 54.6
Potri.005G166400 Populus trichocarpa HOM05D003923 ORTHO05D004553 7.9e-85 318.2 365 56.2
TWI12G0076 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 1.0e-84 317.8 367 57.5
Duzib041G0577 Durio zibethinus HOM05D003923 ORTHO05D004553 2.3e-84 316.6 361 57.1
Potri.002G094700 Populus trichocarpa HOM05D003923 ORTHO05D004553 3.0e-84 316.2 364 56.3
Thecc.08G109100 Theobroma cacao HOM05D003923 ORTHO05D004553 8.7e-84 314.7 360 57.8
FAN13G1718 Fragaria x ananassa HOM05D003923 ORTHO05D004553 3.3e-83 312.8 364 51.4
Nn5g29082 Nelumbo nucifera HOM05D003923 ORTHO05D004553 9.7e-83 311.2 355 49.9
FAN08G0462 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.6e-82 310.5 373 50.4
Manes.18G068600 Manihot esculenta HOM05D003923 ORTHO05D004553 1.6e-82 310.5 366 56.8
Hma1.2p1_0120F.1_g057290 Hydrangea macrophylla HOM05D003923 ORTHO05D004553 2.8e-82 309.7 354 58.5
FAN18G1313 Fragaria x ananassa HOM05D003923 ORTHO05D004553 8.2e-82 308.1 374 50.5
Sabra05G0125400 Salix brachista HOM05D003923 ORTHO05D004553 8.2e-82 308.1 367 54.8
CSS0001866 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 1.8e-81 307.0 359 54.0
Cpa.g.sc36.119 Carica papaya HOM05D003923 ORTHO05D004553 2.4e-81 306.6 365 55.6
FAN04G1592 Fragaria x ananassa HOM05D003923 ORTHO05D004553 2.4e-81 306.6 373 50.1
MD15G1366500 Malus domestica HOM05D003923 ORTHO05D004553 2.4e-81 306.6 377 53.1
FvH4_5g37730 Fragaria vesca HOM05D003923 ORTHO05D004553 6.9e-81 305.1 374 49.7
Ca_15243_v3 Cicer arietinum L. HOM05D003923 ORTHO05D004553 1.2e-80 304.3 371 56.3
Duzib093G1759 Durio zibethinus HOM05D003923 ORTHO05D004553 1.2e-80 304.3 372 54.0
Rhsim06G0083500 Rhododendron simsii HOM05D003923 ORTHO05D004553 2.0e-80 303.5 379 49.6
RcHm_v2.0_Chr7g0239471 Rosa chinensis HOM05D003923 ORTHO05D004553 4.5e-80 302.4 376 49.7
Ciclev10001646m.g Citrus clementina HOM05D003923 ORTHO05D004553 2.2e-79 300.1 373 54.7
Gohir.A06G036700 Gossypium hirsutum HOM05D003923 ORTHO05D004553 3.8e-79 299.3 365 52.6
Gohir.D06G037500 Gossypium hirsutum HOM05D003923 ORTHO05D004553 4.2e-78 295.8 364 53.6
Prupe.1G514400 Prunus persica HOM05D003923 ORTHO05D004553 5.5e-78 295.4 378 51.3
Peaxi162Scf00041g01015 Petunia axillaris HOM05D003923 ORTHO05D004553 7.9e-77 291.6 369 48.8
COL.COLO4_16427 Corchorus olitorius HOM05D003923 ORTHO05D004553 1.0e-76 291.2 345 55.9
Gorai.010G042400 Gossypium raimondii HOM05D003923 ORTHO05D004553 1.8e-76 290.4 364 53.0
Oeu061492.1 Olea europaea HOM05D003923 ORTHO05D004553 3.9e-76 289.3 368 51.6
MELO3C010430.2 Cucumis melo HOM05D003923 ORTHO05D004553 1.5e-75 287.3 347 50.4
EL10Ac1g01249 Beta vulgaris HOM05D003923 ORTHO05D004553 2.6e-75 286.6 374 51.9
Cc10_g07380 Coffea canephora HOM05D003923 ORTHO05D004553 2.6e-75 286.6 377 50.4
Oeu024542.1 Olea europaea HOM05D003923 ORTHO05D004553 2.6e-75 286.6 354 52.8
MD08G1180900 Malus domestica HOM05D003923 ORTHO05D004553 5.7e-75 285.4 375 48.5
THA.LOC104809709 Tarenaya hassleriana HOM05D003923 ORTHO05D004553 1.3e-74 284.3 372 51.9
TAR628G1119 Trochodendron aralioides HOM05D003923 ORTHO05D004553 1.3e-74 284.3 352 53.4
CANSAT25G0676 Cannabis sativa HOM05D003923 ORTHO05D004553 2.4e-73 280.0 375 51.5
BcaB03g15981 Brassica carinata HOM05D003923 ORTHO05D004553 1.0e-71 274.6 358 51.7
Glyma.04G103500 Glycine max HOM05D003923 ORTHO05D004553 1.7e-71 273.9 348 52.6
VMungo1309G2192 Vigna mungo HOM05D003923 ORTHO05D004553 2.2e-71 273.5 348 54.3
ClCG11G015440 Citrullus lanatus HOM05D003923 ORTHO05D004553 5.0e-71 272.3 362 46.7
BcaC08g47387 Brassica carinata HOM05D003923 ORTHO05D004553 5.5e-70 268.9 359 51.5
C06p52080 Brassica napus HOM05D003923 ORTHO05D004553 5.5e-70 268.9 359 51.5
BolC6t40231H Brassica oleracea HOM05D003923 ORTHO05D004553 5.5e-70 268.9 359 51.5
Lalb_Chr17g0344141 Lupinus albus HOM05D003923 ORTHO05D004553 5.5e-70 268.9 354 49.4
Sabra02G0074700 Salix brachista HOM05D003923 ORTHO05D004553 5.5e-70 268.9 354 51.7
CAN.G1261.5 Capsicum annuum HOM05D003923 ORTHO05D004553 9.4e-70 268.1 354 47.5
CsaV3_4G028650 Cucumis sativus L. HOM05D003923 ORTHO05D004553 9.4e-70 268.1 346 50.9
Aa31LG4G8160 Aethionema arabicum HOM05D003923 ORTHO05D004553 1.4e-68 264.2 355 49.0
Eucgr.F02437 Eucalyptus grandis HOM05D003923 ORTHO05D004553 3.3e-67 259.6 361 45.4
Lsat_1_v5_gn_9_43840 Lactuca sativa HOM05D003923 ORTHO05D004553 7.4e-67 258.5 349 49.6
HanXRQChr15g0491381 Helianthus annuus HOM05D003923 ORTHO05D004553 9.7e-67 258.1 356 49.4
Aqoxy5G01999 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 1.7e-66 257.3 357 44.8
ECA232G2894 Erigeron canadensis HOM05D003923 ORTHO05D004553 1.1e-65 254.6 364 48.4
BcaB05g25102 Brassica carinata HOM05D003923 ORTHO05D004553 1.4e-65 254.2 359 47.9
PGR042G1650 Punica granatum HOM05D003923 ORTHO05D004553 1.4e-65 254.2 353 48.7
Eucgr.F00301 Eucalyptus grandis HOM05D003923 ORTHO05D004553 1.8e-65 253.8 269 54.6
vmacro21241 Vaccinium macrocarpon HOM05D003923 ORTHO05D004553 2.4e-65 253.4 367 47.4
MSTRG.24466 Avicennia marina HOM05D003923 ORTHO05D004553 3.1e-65 253.1 375 43.5
PSO210G6507 Papaver somniferum HOM05D003923 ORTHO05D004553 2.0e-64 250.4 374 48.1
Manes.02G153800 Manihot esculenta HOM05D003923 ORTHO05D004553 1.0e-63 248.1 349 51.9
PSO447G0218 Papaver somniferum HOM05D003923 ORTHO05D004553 1.3e-63 247.7 373 45.0
Solyc12g056990.1 Solanum lycopersicum HOM05D003923 ORTHO05D004553 2.9e-63 246.5 349 46.1
AL2G38420 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 5.0e-63 245.7 364 48.4
CARHR071570 Cardamine hirsuta HOM05D003923 ORTHO05D004553 8.5e-63 245.0 360 48.9
Sp5g33250 Schrenkiella parvula HOM05D003923 ORTHO05D004553 8.5e-63 245.0 362 50.3
Actinidia30763 Actinidia chinensis HOM05D003923 ORTHO05D004553 1.5e-62 244.2 341 46.9
Peaxi162Scf00160g00147 Petunia axillaris HOM05D003923 ORTHO05D004553 1.5e-62 244.2 346 47.1
A07p43360 Brassica napus HOM05D003923 ORTHO05D004553 2.5e-62 243.4 353 49.3
MBI02_g08739_MAGBIO Magnolia biondii HOM05D003923 ORTHO05D004553 5.5e-62 242.3 354 46.9
Duzib116G0286 Durio zibethinus HOM05D003923 ORTHO05D004553 7.2e-62 241.9 295 55.3
BraA07t31856Z Brassica rapa HOM05D003923 ORTHO05D004553 9.4e-62 241.5 352 47.2
Ah.05g170190 Amaranthus hybridus HOM05D003923 ORTHO05D004553 2.7e-61 240.0 359 47.1
Carub.0002s2500 Capsella rubella HOM05D003923 ORTHO05D004553 2.7e-61 240.0 371 47.7
Sc23g0000110 Simmondsia chinensis HOM05D003923 ORTHO05D004553 2.7e-61 240.0 385 42.6
Nitab4.5_0000675g0060 Nicotiana tabacum HOM05D003923 ORTHO05D004553 4.7e-61 239.2 349 48.7
PGSC0003DMG400008539 Solanum tuberosum HOM05D003923 ORTHO05D004553 1.0e-60 238.0 350 45.7
ECA246G1087 Erigeron canadensis HOM05D003923 ORTHO05D004553 1.4e-60 237.7 355 48.2
BcaB02g07147 Brassica carinata HOM05D003923 ORTHO05D004553 3.0e-60 236.5 355 45.1
AT1G78110 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 5.2e-60 235.7 361 47.9
A02p22020 Brassica napus HOM05D003923 ORTHO05D004553 5.2e-60 235.7 350 45.4
BraA02t07205Z Brassica rapa HOM05D003923 ORTHO05D004553 6.7e-60 235.3 351 45.6
Lalb_Chr04g0253191 Lupinus albus HOM05D003923 ORTHO05D004553 6.7e-60 235.3 331 47.7
Nitab4.5_0000421g0080 Nicotiana tabacum HOM05D003923 ORTHO05D004553 1.2e-59 234.6 359 45.7
AL1G35680 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 2.6e-59 233.4 349 48.7
AT1G22230 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 2.6e-59 233.4 348 47.1
PGSC0003DMG400009479 Solanum tuberosum HOM05D003923 ORTHO05D004553 2.6e-59 233.4 352 46.9
Sopen04g029130 Solanum pennellii HOM05D003923 ORTHO05D004553 4.4e-59 232.6 363 44.9
Thhalv10018798m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 9.7e-59 231.5 368 47.8
C02p35410 Brassica napus HOM05D003923 ORTHO05D004553 2.8e-58 229.9 350 45.1
BolC2t09553H Brassica oleracea HOM05D003923 ORTHO05D004553 6.3e-58 228.8 350 44.9
Sp1g19740 Schrenkiella parvula HOM05D003923 ORTHO05D004553 1.1e-57 228.0 352 44.0
BcaC03g15795 Brassica carinata HOM05D003923 ORTHO05D004553 1.8e-57 227.3 356 44.7
BraA07t30411Z Brassica rapa HOM05D003923 ORTHO05D004553 3.1e-57 226.5 362 47.8
Nitab4.5_0001992g0040 Nicotiana tabacum HOM05D003923 ORTHO05D004553 1.6e-56 224.2 342 45.3
BraA09t39730Z Brassica rapa HOM05D003923 ORTHO05D004553 4.5e-56 222.6 351 43.6
A09p42540 Brassica napus HOM05D003923 ORTHO05D004553 1.3e-55 221.1 352 43.5
Carub.0001s2178 Capsella rubella HOM05D003923 ORTHO05D004553 2.2e-55 220.3 349 47.0
CARHR022580 Cardamine hirsuta HOM05D003923 ORTHO05D004553 5.0e-55 219.2 352 45.2
BcaC08g45438 Brassica carinata HOM05D003923 ORTHO05D004553 1.1e-54 218.0 359 46.2
A07p27700 Brassica napus HOM05D003923 ORTHO05D004553 1.1e-54 218.0 360 46.7
C06p30680 Brassica napus HOM05D003923 ORTHO05D004553 1.1e-54 218.0 359 46.2
BolC6t38232H Brassica oleracea HOM05D003923 ORTHO05D004553 1.1e-54 218.0 359 46.2
Nitab4.5_0002243g0010 Nicotiana tabacum HOM05D003923 ORTHO05D004553 5.5e-54 215.7 321 44.5
Sed0005628 Sechium edule HOM05D003923 ORTHO05D004553 1.2e-53 214.5 352 44.6
CsaV3_2G024220 Cucumis sativus L. HOM05D003923 ORTHO05D004553 1.6e-53 214.2 354 47.2
MSTRG.22149 Avicennia marina HOM05D003923 ORTHO05D004553 2.3e-52 210.3 360 43.1
BcaB07g32245 Brassica carinata HOM05D003923 ORTHO05D004553 5.2e-52 209.1 349 43.8
Migut.N02906 Erythranthe guttata HOM05D003923 ORTHO05D004553 2.6e-51 206.8 384 37.8
BcaB07g32243 Brassica carinata HOM05D003923 ORTHO05D004553 3.4e-51 206.5 352 43.8
BcaC05g26150 Brassica carinata HOM05D003923 ORTHO05D004553 3.4e-51 206.5 352 43.8
C05p21350 Brassica napus HOM05D003923 ORTHO05D004553 3.4e-51 206.5 352 43.8
Solyc04g072940.4 Solanum lycopersicum HOM05D003923 ORTHO05D004553 4.4e-51 206.1 329 46.5
BolC5t30833H Brassica oleracea HOM05D003923 ORTHO05D004553 9.8e-51 204.9 352 44.9
MELO3C011359.2 Cucumis melo HOM05D003923 ORTHO05D004553 9.8e-51 204.9 354 44.9
Sopen00g003260 Solanum pennellii HOM05D003923 ORTHO05D004553 9.8e-51 204.9 309 43.7
ClCG08G011040 Citrullus lanatus HOM05D003923 ORTHO05D004553 1.1e-49 201.4 354 44.1
Sed0003612 Sechium edule HOM05D003923 ORTHO05D004553 2.7e-48 196.8 293 43.0
Atru.chr13.1213 Acer truncatum HOM05D003923 ORTHO05D004553 5.0e-47 192.6 307 47.9
Thhalv10008264m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 1.2e-45 188.0 353 38.0
A07p14630 Brassica napus HOM05D003923 ORTHO05D004553 3.6e-45 186.4 346 40.8
unitig_21.g20601 Utricularia gibba HOM05D003923 ORTHO05D004553 3.0e-44 183.3 368 36.4
BraA07t29207Z Brassica rapa HOM05D003923 ORTHO05D004553 5.2e-44 182.6 345 39.4
Migut.O00455 Erythranthe guttata HOM05D003923 ORTHO05D004553 2.0e-43 180.6 235 47.2
Aqoxy6G00599 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 1.3e-42 177.9 362 35.1
BcaC06g34942 Brassica carinata HOM05D003923 ORTHO05D004553 1.7e-42 177.6 344 39.5
Dinv13027 Davidia involucrata HOM05D003923 ORTHO05D004553 1.1e-41 174.9 250 51.6
AUR62027732 Chenopodium quinoa HOM05D003923 ORTHO05D004553 7.8e-40 168.7 190 49.5
HanXRQChr05g0162921 Helianthus annuus HOM05D003923 ORTHO05D004553 1.0e-39 168.3 378 38.9
Aa31LG7G6170 Aethionema arabicum HOM05D003923 ORTHO05D004553 2.3e-39 167.2 350 36.9
PSO781G0128 Papaver somniferum HOM05D003923 ORTHO05D004553 5.0e-39 166.0 418 34.2
C07p21520 Brassica napus HOM05D003923 ORTHO05D004553 5.6e-38 162.5 344 37.5
ATR0564G364 Amborella trichopoda HOM05D003923 ORTHO05D004553 4.7e-37 159.5 362 35.1
unitig_744.g24093 Utricularia gibba HOM05D003923 ORTHO05D004553 1.4e-36 157.9 358 34.6
PSO541G2428 Papaver somniferum HOM05D003923 ORTHO05D004553 2.0e-35 154.1 435 32.2
Sed0022190 Sechium edule HOM05D003923 ORTHO05D004553 2.2e-34 150.6 258 41.5
Zm00001eb098670 Zea mays HOM05D003923 ORTHO05D004553 4.9e-34 149.4 390 32.3
Zm00001eb255200 Zea mays HOM05D003923 ORTHO05D004553 2.4e-33 147.1 361 35.2
SalBow7G0529 Salvia bowleyana HOM05D003923 ORTHO05D004553 2.7e-32 143.7 317 36.6
SEGI_41423 Sequoiadendron giganteum HOM05D003923 ORTHO05D004553 2.5e-30 137.1 361 32.4
Zm00001eb194180 Zea mays HOM05D003923 ORTHO05D004553 7.3e-30 135.6 355 34.6
Zm00001eb311240 Zea mays HOM05D003923 ORTHO05D004553 1.6e-29 134.4 366 33.9
CDE12G0356 Ceratophyllum demersum HOM05D003923 ORTHO05D004553 6.8e-28 129.0 230 39.1
BolC7t42678H Brassica oleracea HOM05D003923 ORTHO05D004553 1.4e-25 121.3 178 45.5
ATR0122G028 Amborella trichopoda HOM05D003923 ORTHO05D004553 1.6e-24 117.9 344 30.8
HPP92_002331 Vanilla planifolia HOM05D003923 ORTHO05D004553 2.0e-24 117.5 350 34.0
GSVIVG01009013001 Vitis vinifera HOM05D003923 ORTHO05D004553 3.9e-23 113.2 200 39.5
A07p43420 Brassica napus HOM05D003923 ORTHO05D004553 1.1e-20 105.1 111 61.3
Os02g0753400 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 2.9e-18 97.1 357 30.5
Os09g0370000 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 7.1e-17 92.4 180 36.7
ATR0153G027 Amborella trichopoda HOM05D003923 ORTHO05D004553 5.2e-12 76.3 164 34.1
unitig_578.g16204 Utricularia gibba HOM05D003923 ORTHO05D004553 1.2e-11 75.1 211 32.2
ATR0602G295 Amborella trichopoda HOM05D004118 ORTHO05D004686 1.3e-10 71.6 287 28.6
CsaV3_3G019580 Cucumis sativus L. HOM05D004118 ORTHO05D004686 5.4e-09 66.2 314 23.9
MELO3C019394.2 Cucumis melo HOM05D004118 ORTHO05D004686 1.6e-08 64.7 312 24.4
Aqoxy4G00578 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 2.7e-08 63.9 274 25.9
Peaxi162Scf00069g00197 Petunia axillaris HOM05D004118 ORTHO05D004686 2.7e-08 63.9 286 24.5
Actinidia27197 Actinidia chinensis HOM05D003923 ORTHO05D004553 4.6e-08 63.2 81 43.2
BcaB03g11901 Brassica carinata HOM05D003923 ORTHO05D004553 4.6e-08 63.2 105 40.0
HanXRQChr03g0070941 Helianthus annuus HOM05D004118 ORTHO05D004686 1.3e-07 61.6 325 25.2
Haze_09381 Corylus avellana HOM05D004118 ORTHO05D004686 1.1e-06 58.5 299 25.1
CiPaw.12G116800 Carya illinoinensis HOM05D004118 ORTHO05D004686 1.5e-06 58.2 307 23.5
BcaC07g38451 Brassica carinata HOM05D003923 ORTHO05D004553 1.9e-06 57.8 56 51.8
MBI07_g32544_MAGBIO Magnolia biondii HOM05D004118 ORTHO05D004686 2.5e-06 57.4 286 23.4
Sed0017211 Sechium edule HOM05D004118 ORTHO05D004686 3.3e-06 57.0 279 25.4
Cfa020624 Carpinus fangiana HOM05D004118 ORTHO05D004686 5.6e-06 56.2 298 23.5
BolC8t49783H Brassica oleracea HOM05D003923 ORTHO05D004553 7.3e-06 55.8 101 38.6


User provided reference genes

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