Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0065431 Lupinus albus HOM05D004394 ORTHO05D005208 8.1e-64 246.9 123 100.0
Lj2g0026973 Lotus japonicus HOM05D004394 ORTHO05D005208 1.1e-55 219.9 123 86.2
Glyma.20G173300 Glycine max HOM05D004394 ORTHO05D005208 1.4e-55 219.5 123 84.6
Lalb_Chr08g0242051 Lupinus albus HOM05D004394 ORTHO05D005208 1.8e-55 219.2 123 86.2
Psat2g179880 Pisum sativum HOM05D004394 ORTHO05D005208 1.8e-55 219.2 123 84.6
TPR.G17517 Trifolium pratense HOM05D004394 ORTHO05D005208 1.8e-55 219.2 123 85.4
Phvul.007G087400 Phaseolus vulgaris HOM05D004394 ORTHO05D005208 2.4e-55 218.8 123 83.7
Ca_08121_v3 Cicer arietinum L. HOM05D004394 ORTHO05D005208 3.1e-55 218.4 123 84.6
TPR.G10620 Trifolium pratense HOM05D004394 ORTHO05D005208 4.0e-55 218.0 123 83.7
VMungo0720G0524 Vigna mungo HOM05D004394 ORTHO05D005208 4.0e-55 218.0 121 85.1
Ca_20267_v3 Cicer arietinum L. HOM05D004394 ORTHO05D005208 5.2e-55 217.6 123 84.6
Medtr2g028730 Medicago truncatula HOM05D004394 ORTHO05D005208 1.5e-54 216.1 123 83.7
Psat1g170200 Pisum sativum HOM05D004394 ORTHO05D005208 2.0e-54 215.7 123 82.9
Medtr1g050345 Medicago truncatula HOM05D004394 ORTHO05D005208 2.2e-53 212.2 123 82.9
Glyma.10G218300 Glycine max HOM05D004394 ORTHO05D005208 2.9e-53 211.8 123 80.5
CANSAT80G0901 Cannabis sativa HOM05D004394 ORTHO05D005208 2.4e-52 208.8 123 80.5
Migut.C01173 Erythranthe guttata HOM05D004394 ORTHO05D005208 4.2e-52 208.0 123 80.5
Peaxi162Scf00041g00179 Petunia axillaris HOM05D004394 ORTHO05D005208 1.6e-51 206.1 123 78.0
Phvul.002G138800 Phaseolus vulgaris HOM05D004394 ORTHO05D005208 1.6e-51 206.1 122 79.5
MELO3C011026.2 Cucumis melo HOM05D004394 ORTHO05D005208 2.1e-51 205.7 123 79.7
Lsat_1_v5_gn_2_108521 Lactuca sativa HOM05D004394 ORTHO05D005208 2.1e-51 205.7 124 82.3
SalBow7G3516 Salvia bowleyana HOM05D004394 ORTHO05D005208 2.1e-51 205.7 123 78.0
Eucgr.D01128 Eucalyptus grandis HOM05D004394 ORTHO05D005208 2.7e-51 205.3 123 79.7
ClCG08G011100 Citrullus lanatus HOM05D004394 ORTHO05D005208 3.5e-51 204.9 123 78.0
SalBow7G2639 Salvia bowleyana HOM05D004394 ORTHO05D005208 3.5e-51 204.9 123 78.0
CsaV3_2G029680 Cucumis sativus L. HOM05D004394 ORTHO05D005208 6.0e-51 204.1 123 79.7
Oeu046302.1 Olea europaea HOM05D004394 ORTHO05D005208 6.0e-51 204.1 123 78.9
GSVIVG01032524001 Vitis vinifera HOM05D004394 ORTHO05D005208 7.8e-51 203.8 123 77.2
CAN.G101.27 Capsicum annuum HOM05D004394 ORTHO05D005208 1.0e-50 203.4 123 78.0
Cfa013636 Carpinus fangiana HOM05D004394 ORTHO05D005208 1.0e-50 203.4 123 78.9
Haze_22268 Corylus avellana HOM05D004394 ORTHO05D005208 1.0e-50 203.4 123 78.0
Sabra02G0076100 Salix brachista HOM05D004394 ORTHO05D005208 1.3e-50 203.0 123 78.0
Nitab4.5_0000232g0200 Nicotiana tabacum HOM05D004394 ORTHO05D005208 1.7e-50 202.6 123 78.0
QL12p036785 Quercus lobata HOM05D004394 ORTHO05D005208 1.7e-50 202.6 122 78.7
Sopen04g029330 Solanum pennellii HOM05D004394 ORTHO05D005208 1.7e-50 202.6 123 78.0
MD08G1182900 Malus domestica HOM05D004394 ORTHO05D005208 2.3e-50 202.2 123 80.5
Manes.08G094000 Manihot esculenta HOM05D004394 ORTHO05D005208 2.3e-50 202.2 123 78.0
PGSC0003DMG400006413 Solanum tuberosum HOM05D004394 ORTHO05D005208 2.3e-50 202.2 123 78.0
FvH4_5g37330 Fragaria vesca HOM05D004394 ORTHO05D005208 3.0e-50 201.8 123 79.7
FAN18G2812 Fragaria x ananassa HOM05D004394 ORTHO05D005208 3.0e-50 201.8 123 79.7
Potri.002G096600 Populus trichocarpa HOM05D004394 ORTHO05D005208 3.0e-50 201.8 123 77.2
FAN08G2022 Fragaria x ananassa HOM05D004394 ORTHO05D005208 3.9e-50 201.4 123 79.7
unitig_899.g14554 Utricularia gibba HOM05D000298 ORTHO05D000553 3.9e-50 201.4 123 77.2
SGA_v2.0_scaffold24G10492 Striga asiatica HOM05D004394 ORTHO05D005208 6.6e-50 200.7 123 74.8
TAR376G0181 Trochodendron aralioides HOM05D004394 ORTHO05D005208 6.6e-50 200.7 123 74.8
CiPaw.08G045200 Carya illinoinensis HOM05D004394 ORTHO05D005208 8.7e-50 200.3 121 77.7
Cc10_g07190 Coffea canephora HOM05D004394 ORTHO05D005208 8.7e-50 200.3 123 77.2
Prupe.1G517100 Prunus persica HOM05D004394 ORTHO05D005208 8.7e-50 200.3 123 78.9
CANSAT80G2869 Cannabis sativa HOM05D004394 ORTHO05D005208 1.1e-49 199.9 123 77.2
ECA238G4620 Erigeron canadensis HOM05D004394 ORTHO05D005208 1.1e-49 199.9 124 79.0
MBI05_g37052_MAGBIO Magnolia biondii HOM05D004394 ORTHO05D005208 1.1e-49 199.9 123 75.6
AUR62036356 Chenopodium quinoa HOM05D004394 ORTHO05D005208 1.5e-49 199.5 123 76.4
EL10Ac5g11858 Beta vulgaris HOM05D004394 ORTHO05D005208 1.9e-49 199.1 123 76.4
AUR62027759 Chenopodium quinoa HOM05D004394 ORTHO05D005208 1.9e-49 199.1 123 75.6
AUR62030717 Chenopodium quinoa HOM05D004394 ORTHO05D005208 1.9e-49 199.1 123 76.4
FAN13G1242 Fragaria x ananassa HOM05D004394 ORTHO05D005208 1.9e-49 199.1 123 78.9
Nn2g12152 Nelumbo nucifera HOM05D004394 ORTHO05D005208 3.3e-49 198.4 123 74.0
Sed0012623 Sechium edule HOM05D004394 ORTHO05D005208 5.6e-49 197.6 123 75.6
CSS0017732 Camellia sinensis var. sinensis HOM05D004394 ORTHO05D005208 7.3e-49 197.2 123 74.8
Ciclev10003351m.g Citrus clementina HOM05D004394 ORTHO05D005208 7.3e-49 197.2 124 76.6
Oeu012929.1 Olea europaea HOM05D004394 ORTHO05D005208 7.3e-49 197.2 123 76.4
TAR628G0041 Trochodendron aralioides HOM05D004394 ORTHO05D005208 7.3e-49 197.2 123 74.0
Ah.12g059310 Amaranthus hybridus HOM05D004394 ORTHO05D005208 9.6e-49 196.8 123 76.4
Nn5g30107 Nelumbo nucifera HOM05D004394 ORTHO05D005208 9.6e-49 196.8 122 73.0
QL03p027611 Quercus lobata HOM05D004394 ORTHO05D005208 1.3e-48 196.4 123 76.4
Sc01g0000460 Simmondsia chinensis HOM05D004394 ORTHO05D005208 1.3e-48 196.4 123 74.8
Atru.chr5.2725 Acer truncatum HOM05D004394 ORTHO05D005208 2.1e-48 195.7 124 75.8
HanXRQChr07g0194691 Helianthus annuus HOM05D004394 ORTHO05D005208 2.1e-48 195.7 124 75.8
Actinidia10324 Actinidia chinensis HOM05D004394 ORTHO05D005208 2.8e-48 195.3 123 75.6
DCAR_008736 Daucus carota HOM05D004394 ORTHO05D005208 2.8e-48 195.3 124 74.2
PGR042G0728 Punica granatum HOM05D004394 ORTHO05D005208 3.6e-48 194.9 123 74.0
RcHm_v2.0_Chr7g0238971 Rosa chinensis HOM05D004394 ORTHO05D005208 3.6e-48 194.9 123 78.9
Thecc.08G106700 Theobroma cacao HOM05D004394 ORTHO05D005208 3.6e-48 194.9 125 78.4
CDE06G0322 Ceratophyllum demersum HOM05D004394 ORTHO05D005208 4.8e-48 194.5 123 72.4
Duzib041G0085 Durio zibethinus HOM05D004394 ORTHO05D005208 4.8e-48 194.5 125 79.2
Atru.chr13.1186 Acer truncatum HOM05D004394 ORTHO05D005208 6.2e-48 194.1 124 74.2
Actinidia30773 Actinidia chinensis HOM05D004394 ORTHO05D005208 6.2e-48 194.1 122 74.6
Aqoxy6G00782 Aquilegia oxysepala HOM05D004394 ORTHO05D005208 6.2e-48 194.1 123 74.8
MSTRG.25920 Avicennia marina HOM05D004394 ORTHO05D005208 6.2e-48 194.1 123 74.8
HanXRQChr04g0126451 Helianthus annuus HOM05D004394 ORTHO05D005208 1.1e-47 193.4 124 75.0
Potri.005G165000 Populus trichocarpa HOM05D004394 ORTHO05D005208 1.4e-47 193.0 123 72.4
Dinv36547 Davidia involucrata HOM05D004394 ORTHO05D005208 1.8e-47 192.6 121 75.2
Gohir.D06G036200 Gossypium hirsutum HOM05D004394 ORTHO05D005208 1.8e-47 192.6 125 76.8
Gorai.010G040200 Gossypium raimondii HOM05D004394 ORTHO05D005208 1.8e-47 192.6 125 76.8
PSO781G0205 Papaver somniferum HOM05D004394 ORTHO05D005208 3.1e-47 191.8 123 74.8
CDE02G1736 Ceratophyllum demersum HOM05D004394 ORTHO05D005208 4.0e-47 191.4 123 69.9
Sabra05G0124400 Salix brachista HOM05D004394 ORTHO05D005208 5.3e-47 191.0 121 72.7
Gohir.A06G035600 Gossypium hirsutum HOM05D004394 ORTHO05D005208 9.0e-47 190.3 125 76.0
Carub.0001s2182 Capsella rubella HOM05D004394 ORTHO05D005208 1.2e-46 189.9 125 74.4
PSO541G5821 Papaver somniferum HOM05D004394 ORTHO05D005208 1.2e-46 189.9 123 74.0
Cpa.g.sc53.145 Carica papaya HOM05D004394 ORTHO05D005208 2.6e-46 188.7 124 76.6
THA.LOC104800150 Tarenaya hassleriana HOM05D004394 ORTHO05D005208 2.6e-46 188.7 125 73.6
Solyc04g074150.3 Solanum lycopersicum HOM05D004394 ORTHO05D005208 3.4e-46 188.3 116 76.7
TWI36G1364 Tripterygium wilfordii HOM05D004394 ORTHO05D005208 3.4e-46 188.3 124 70.2
CARHR022650 Cardamine hirsuta HOM05D004394 ORTHO05D005208 5.8e-46 187.6 125 73.6
TWI12G1259 Tripterygium wilfordii HOM05D004394 ORTHO05D005208 5.8e-46 187.6 124 75.0
AL1G35720 Arabidopsis lyrata HOM05D004394 ORTHO05D005208 7.6e-46 187.2 125 72.8
BraA07t29204Z Brassica rapa HOM05D004394 ORTHO05D005208 7.6e-46 187.2 126 73.0
Sp1g19780 Schrenkiella parvula HOM05D004394 ORTHO05D005208 7.6e-46 187.2 126 72.2
Duzib093G1861 Durio zibethinus HOM05D004394 ORTHO05D005208 9.9e-46 186.8 125 75.2
AT1G22270 Arabidopsis thaliana HOM05D004394 ORTHO05D005208 1.3e-45 186.4 125 72.8
BcaC06g34947 Brassica carinata HOM05D004394 ORTHO05D005208 1.7e-45 186.0 126 72.2
BolC7t42673H Brassica oleracea HOM05D004394 ORTHO05D005208 1.7e-45 186.0 126 72.2
ATR0782G020 Amborella trichopoda HOM05D004394 ORTHO05D005208 2.2e-45 185.7 123 70.7
A07p14580 Brassica napus HOM05D004394 ORTHO05D005208 2.2e-45 185.7 125 72.0
Duzib093G0332 Durio zibethinus HOM05D004394 ORTHO05D005208 2.2e-45 185.7 125 74.4
Cpa.g.sc36.132 Carica papaya HOM05D004394 ORTHO05D005208 3.8e-45 184.9 124 75.8
C07p21470 Brassica napus HOM05D004394 ORTHO05D005208 8.4e-45 183.7 124 71.8
Thhalv10009116m.g Eutrema salsugineum HOM05D004394 ORTHO05D005208 8.4e-45 183.7 126 70.6
Gohir.A05G267200 Gossypium hirsutum HOM05D004394 ORTHO05D005208 1.1e-44 183.3 125 74.4
MD15G1369300 Malus domestica HOM05D004394 ORTHO05D005208 1.1e-44 183.3 116 75.9
CARHR071660 Cardamine hirsuta HOM05D004394 ORTHO05D005208 1.4e-44 183.0 125 70.4
BcaB07g32248 Brassica carinata HOM05D004394 ORTHO05D005208 1.9e-44 182.6 129 67.4
THA.LOC104809715 Tarenaya hassleriana HOM05D004394 ORTHO05D005208 1.9e-44 182.6 125 71.2
Thhalv10019322m.g Eutrema salsugineum HOM05D004394 ORTHO05D005208 3.2e-44 181.8 125 69.6
A09p42510 Brassica napus HOM05D004394 ORTHO05D005208 5.4e-44 181.0 128 68.8
BraA09t39727Z Brassica rapa HOM05D004394 ORTHO05D005208 5.4e-44 181.0 128 68.8
Gorai.009G281400 Gossypium raimondii HOM05D004394 ORTHO05D005208 5.4e-44 181.0 125 73.6
Hma1.2p1_0575F.1_g181580 Hydrangea macrophylla HOM05D004394 ORTHO05D005208 9.3e-44 180.3 116 74.1
BcaC05g26154 Brassica carinata HOM05D004394 ORTHO05D005208 1.2e-43 179.9 127 67.7
C05p21390 Brassica napus HOM05D004394 ORTHO05D005208 1.2e-43 179.9 127 67.7
COL.COLO4_16398 Corchorus olitorius HOM05D004394 ORTHO05D005208 1.2e-43 179.9 118 76.3
SHI20485 Sapria himalayana HOM05D004394 ORTHO05D005208 1.2e-43 179.9 121 69.4
Gohir.D05G268800 Gossypium hirsutum HOM05D004394 ORTHO05D005208 1.6e-43 179.5 125 72.8
AL2G38520 Arabidopsis lyrata HOM05D004394 ORTHO05D005208 6.0e-43 177.6 125 69.6
AT1G78190 Arabidopsis thaliana HOM05D004394 ORTHO05D005208 6.0e-43 177.6 125 71.2
EL10Ac1g01214 Beta vulgaris HOM05D004394 ORTHO05D005208 6.0e-43 177.6 116 70.7
BcaB03g15991 Brassica carinata HOM05D004394 ORTHO05D005208 6.0e-43 177.6 125 68.8
BolC5t30836H Brassica oleracea HOM05D004394 ORTHO05D005208 7.9e-43 177.2 127 66.9
CANSAT80G2909 Cannabis sativa HOM05D004394 ORTHO05D005208 1.0e-42 176.8 118 69.5
Aa31LG7G6210 Aethionema arabicum HOM05D004394 ORTHO05D005208 1.3e-42 176.4 125 69.6
Sp5g33330 Schrenkiella parvula HOM05D004394 ORTHO05D005208 1.3e-42 176.4 125 68.8
Rhsim06G0082000 Rhododendron simsii HOM05D004394 ORTHO05D005208 5.1e-42 174.5 121 70.2
CANSAT35G1737 Cannabis sativa HOM05D004394 ORTHO05D005208 6.7e-42 174.1 115 71.3
BcaC08g47394 Brassica carinata HOM05D004394 ORTHO05D005208 2.5e-41 172.2 124 66.9
C06p52130 Brassica napus HOM05D003496 ORTHO05D003909 7.4e-41 170.6 122 67.2
BolC6t40236H Brassica oleracea HOM05D003496 ORTHO05D003909 7.4e-41 170.6 122 67.2
BraA07t31861Z Brassica rapa HOM05D003496 ORTHO05D003909 1.6e-40 169.5 122 68.0
Carub.0002s2509 Capsella rubella HOM05D004394 ORTHO05D005208 1.6e-40 169.5 123 64.2
SMO356G0508 Selaginella moellendorffii HOM05D004394 ORTHO05D005208 2.1e-40 169.1 123 65.0
SEGI_05614 Sequoiadendron giganteum HOM05D004394 ORTHO05D005208 2.8e-40 168.7 123 64.2
Mapoly0008s0078 Marchantia polymorpha HOM05D004394 ORTHO05D005208 3.7e-40 168.3 123 62.6
Haze_00323 Corylus avellana HOM05D004394 ORTHO05D005208 8.1e-40 167.2 123 67.5
A07p43490 Brassica napus HOM05D003496 ORTHO05D003909 1.1e-39 166.8 122 66.4
Pp3c10_8220 Physcomitrium patens HOM05D004394 ORTHO05D005208 1.4e-39 166.4 123 61.8
CBR_g44926 Chara braunii HOM05D004394 ORTHO05D005208 1.8e-39 166.0 123 62.6
Nitab4.5_0005777g0070 Nicotiana tabacum HOM05D004394 ORTHO05D005208 6.9e-39 164.1 114 69.3
BcaB03g14221 Brassica carinata HOM05D004394 ORTHO05D005208 3.8e-37 158.3 113 68.1
Cpa.g.sc247.5 Carica papaya HOM05D004394 ORTHO05D005208 2.4e-36 155.6 122 66.4
Nn6g33602 Nelumbo nucifera HOM05D004394 ORTHO05D005208 7.1e-36 154.1 116 61.2
Nn4g22250 Nelumbo nucifera HOM05D004394 ORTHO05D005208 6.0e-35 151.0 109 62.4
Cre12.g512550 Chlamydomonas reinhardtii HOM05D004394 ORTHO05D005208 3.0e-34 148.7 122 58.2
AUR62038524 Chenopodium quinoa HOM05D004394 ORTHO05D005208 1.6e-32 142.9 88 71.6
Zm00001eb109660 Zea mays HOM05D004394 ORTHO05D005208 8.2e-32 140.6 132 51.5
Os07g0623000 Oryza sativa ssp. japonica HOM05D004394 ORTHO05D005208 4.5e-30 134.8 131 49.6
CiPaw.07G180000 Carya illinoinensis HOM05D004394 ORTHO05D005208 2.9e-29 132.1 106 61.3
AagrBONN_evm.TU.Sc2ySwM_344.4664 Anthoceros agrestis HOM05D004394 ORTHO05D005208 3.8e-29 131.7 123 53.7
PRCOL_00005343 Prasinoderma coloniale HOM05D004394 ORTHO05D005208 6.0e-27 124.4 132 49.2
MCO01G362 Micromonas commoda HOM05D004394 ORTHO05D005208 7.9e-27 124.0 122 49.2
Cpa.g.sc257.3 Carica papaya HOM05D004394 ORTHO05D005208 1.3e-26 123.2 123 56.1
Cfa016137 Carpinus fangiana HOM05D004394 ORTHO05D005208 4.1e-23 111.7 115 51.3
Nn8g39569 Nelumbo nucifera HOM05D004394 ORTHO05D005208 5.3e-23 111.3 106 50.9
Haze_27710 Corylus avellana HOM05D004394 ORTHO05D005208 1.7e-21 106.3 125 48.0
Lsat_1_v5_gn_4_16040 Lactuca sativa HOM05D004394 ORTHO05D005208 2.7e-19 99.0 123 44.7
QL05p087667 Quercus lobata HOM05D004394 ORTHO05D000126 7.9e-19 97.4 68 66.2
SEGI_26774 Sequoiadendron giganteum HOM05D004394 ORTHO05D005208 1.0e-18 97.1 63 66.7
Nn1g03585 Nelumbo nucifera HOM05D004394 ORTHO05D005208 5.9e-14 81.3 57 61.4
HanXRQChr03g0069311 Helianthus annuus HOM05D004394 ORTHO05D005208 9.7e-09 63.9 39 69.2


User provided reference genes

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