Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 3.7e-103 378.3 195 100.0
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 5.0e-76 288.1 194 79.4
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 1.3e-47 193.7 206 55.3
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 7.1e-46 188.0 201 56.7
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 2.1e-45 186.4 190 56.8
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 2.3e-44 183.0 201 54.2
Ca_15998_v3 Cicer arietinum L. HOM05D008012 ORTHO05D010154 6.6e-36 154.8 194 49.5
TPR.G26063 Trifolium pratense HOM05D008012 ORTHO05D010154 1.5e-35 153.7 203 50.2
Medtr3g100460 Medicago truncatula HOM05D008012 ORTHO05D010154 7.3e-35 151.4 201 47.3
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 7.3e-35 151.4 197 46.2
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 1.6e-34 150.2 187 52.9
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 9.0e-33 144.4 212 42.5
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 7.1e-30 134.8 189 42.9
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 1.2e-29 134.0 197 44.2
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 1.2e-29 134.0 172 47.1
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 1.6e-29 133.7 227 40.1
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 7.8e-29 131.3 108 59.3
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 1.7e-28 130.2 131 52.7
CiPaw.07G166200 Carya illinoinensis HOM05D008012 ORTHO05D010154 2.3e-28 129.8 291 32.0
vmacro21334 Vaccinium macrocarpon HOM05D008012 ORTHO05D010154 2.3e-28 129.8 182 40.7
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 3.9e-28 129.0 189 38.1
VMungo1309G2208 Vigna mungo HOM05D008012 ORTHO05D010154 5.1e-28 128.6 107 61.7
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 2.5e-27 126.3 164 45.1
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 2.5e-27 126.3 164 45.1
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 2.5e-27 126.3 200 40.0
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 4.3e-27 125.6 191 41.4
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 4.3e-27 125.6 164 45.1
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 7.3e-27 124.8 144 47.9
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 7.3e-27 124.8 151 47.0
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 9.6e-27 124.4 163 44.2
Dinv42620 Davidia involucrata HOM05D008012 ORTHO05D010154 1.3e-26 124.0 150 46.7
Gohir.A05G219900 Gossypium hirsutum HOM05D008012 ORTHO05D010154 1.3e-26 124.0 158 44.3
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 1.6e-26 123.6 199 38.7
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 2.8e-26 122.9 267 34.5
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 1.1e-25 120.9 154 44.2
TAR628G1418 Trochodendron aralioides HOM05D008012 ORTHO05D010154 1.4e-25 120.6 164 45.1
Gohir.D05G222500 Gossypium hirsutum HOM05D008012 ORTHO05D010154 1.8e-25 120.2 158 43.7
Gorai.009G229900 Gossypium raimondii HOM05D008012 ORTHO05D010154 1.8e-25 120.2 158 43.7
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 2.4e-25 119.8 246 35.4
PGR031G3518 Punica granatum HOM05D052328 ORTHO05D010154 2.4e-25 119.8 140 45.7
Dinv44854 Davidia involucrata HOM05D008012 ORTHO05D010154 4.0e-25 119.0 279 33.7
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 4.0e-25 119.0 184 40.8
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 4.0e-25 119.0 187 41.2
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 1.2e-24 117.5 233 35.6
arahy.Tifrunner.gnm1.ann1.S7389H Arachis hypogaea HOM05D008012 ORTHO05D010154 1.5e-24 117.1 139 49.6
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 1.7e-23 113.6 214 36.0
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 2.2e-23 113.2 162 42.6
Hma1.2p1_0125F.1_g058940 Hydrangea macrophylla HOM05D008012 ORTHO05D010154 2.2e-23 113.2 278 30.9
Eucgr.F02139 Eucalyptus grandis HOM05D008012 ORTHO05D010154 2.4e-22 109.8 132 45.5
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 1.2e-21 107.5 165 42.4
Nn5g29899 Nelumbo nucifera HOM05D008012 ORTHO05D010154 2.7e-21 106.3 269 32.7
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 7.9e-21 104.8 135 41.5
TWI56G1079 Tripterygium wilfordii HOM05D008012 ORTHO05D010154 1.0e-20 104.4 123 48.8
HanXRQChr12g0378051 Helianthus annuus HOM05D008012 ORTHO05D010154 1.9e-19 100.1 162 38.9
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 1.9e-19 100.1 161 41.0
HanXRQChr12g0378041 Helianthus annuus HOM05D008012 ORTHO05D010154 2.5e-19 99.8 149 39.6
Sc23g0000670 Simmondsia chinensis HOM05D008012 ORTHO05D010154 2.1e-18 96.7 153 41.2
PSO017G0519 Papaver somniferum HOM05D008012 ORTHO05D010154 3.8e-15 85.9 185 34.1
arahy.Tifrunner.gnm1.ann1.XWH5X4 Arachis hypogaea HOM05D008012 ORTHO05D010154 1.4e-14 84.0 135 45.2
CAN.G1215.11 Capsicum annuum HOM05D008012 ORTHO05D010154 1.9e-14 83.6 129 39.5
Potri.005G156500 Populus trichocarpa HOM05D008012 ORTHO05D010154 7.1e-14 81.6 126 36.5
Zm00001eb038310 Zea mays HOM05D008012 ORTHO05D010154 1.0e-12 77.8 124 38.7
Actinidia10381 Actinidia chinensis HOM05D000160 ORTHO05D001344 1.8e-12 77.0 70 54.3
Sabra05G0120100 Salix brachista HOM05D008012 ORTHO05D010154 2.3e-12 76.6 126 34.1
CSS0015058 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 1.1e-11 74.3 71 53.5
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.5e-11 73.9 181 26.0
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.5e-11 73.2 185 28.1
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.5e-11 73.2 185 28.1
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 7.4e-11 71.6 117 36.8
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 1.3e-10 70.9 192 27.6
Os08g0477800 Oryza sativa ssp. japonica HOM05D008012 ORTHO05D010154 6.2e-10 68.6 111 36.9
Mapoly0028s0074 Marchantia polymorpha HOM05D008196 ORTHO05D010261 2.4e-09 66.6 201 27.9
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 3.1e-09 66.2 179 28.5
Sopen07g015000 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-09 65.9 53 56.6
HPP92_005977 Vanilla planifolia HOM05D061362 ORTHO05D010154 2.6e-08 63.2 68 41.2
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 7.6e-08 61.6 234 24.4
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 7.6e-08 61.6 182 31.3
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 1.0e-07 61.2 206 30.1
VMungo1309G2756 Vigna mungo HOM05D008012 ORTHO05D010154 1.3e-07 60.8 84 48.8
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 4.9e-07 58.9 184 29.9
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 8.4e-07 58.2 201 29.4
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 1.9e-06 57.0 195 24.6
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 1.9e-06 57.0 183 25.7
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 1.9e-06 57.0 211 29.4
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 2.5e-06 56.6 194 27.8
SHI00648 Sapria himalayana HOM05D008012 ORTHO05D010154 3.2e-06 56.2 135 32.6
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 4.2e-06 55.8 195 27.2
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 4.2e-06 55.8 179 26.3
CSS0023045 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 5.5e-06 55.5 78 43.6
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 5.5e-06 55.5 182 29.1


User provided reference genes

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