Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0064641 Lupinus albus HOM05D016095 ORTHO05D001848 4.5e-84 314.7 174 100.0
Lj1g0021910 Lotus japonicus HOM05D016095 ORTHO05D001848 3.1e-29 132.5 187 46.5
Glyma.06G089300 Glycine max HOM05D016095 ORTHO05D029748 9.5e-26 120.9 193 46.6
Haze_21939 Corylus avellana HOM05D002243 ORTHO05D001848 2.5e-18 96.3 211 33.2
Cfa013396 Carpinus fangiana HOM05D002243 ORTHO05D001848 7.3e-18 94.7 211 33.2
Sabra02G0089100 Salix brachista HOM05D002243 ORTHO05D001848 5.8e-15 85.1 207 30.0
CiPaw.08G028200 Carya illinoinensis HOM05D002243 ORTHO05D001848 9.8e-15 84.3 208 34.1
CiPaw.07G201100 Carya illinoinensis HOM05D002243 ORTHO05D001848 6.4e-14 81.6 207 35.3
MD15G1395300 Malus domestica HOM05D002243 ORTHO05D001848 1.1e-13 80.9 204 32.4
QL12p040753 Quercus lobata HOM05D002243 ORTHO05D001848 2.0e-12 76.6 222 36.5
Nn6g34568 Nelumbo nucifera HOM05D002243 ORTHO05D001848 2.7e-12 76.3 81 45.7
TPR.G12334 Trifolium pratense HOM05D016095 ORTHO05D001848 2.7e-12 76.3 169 36.7
PSO782G0611 Papaver somniferum HOM05D002243 ORTHO05D001848 6.0e-12 75.1 130 42.3
Prupe.1G544100 Prunus persica HOM05D002243 ORTHO05D001848 1.0e-11 74.3 209 29.7
TAR381G0567 Trochodendron aralioides HOM05D002243 ORTHO05D001848 1.0e-11 74.3 80 46.2
PSO832G2889 Papaver somniferum HOM05D002243 ORTHO05D001848 1.3e-11 73.9 130 41.5
Oeu061818.1 Olea europaea HOM05D002243 ORTHO05D001848 3.0e-11 72.8 95 45.3
VMungo1309G0933 Vigna mungo HOM05D016095 ORTHO05D029748 3.0e-11 72.8 155 32.9
Oeu059798.2 Olea europaea HOM05D002243 ORTHO05D001848 5.0e-11 72.0 95 45.3
ATR0767G056 Amborella trichopoda HOM05D002243 ORTHO05D001848 6.6e-11 71.6 83 44.6
CAN.G1061.5 Capsicum annuum HOM05D002243 ORTHO05D001848 6.6e-11 71.6 160 32.5
Medtr3g110590 Medicago truncatula HOM05D016095 ORTHO05D001848 6.6e-11 71.6 156 36.5
Manes.05G185500 Manihot esculenta HOM05D002243 ORTHO05D001848 1.5e-10 70.5 226 29.2
Dinv44914 Davidia involucrata HOM05D002243 ORTHO05D001848 2.5e-10 69.7 214 29.0
Peaxi162Scf00096g00157 Petunia axillaris HOM05D002243 ORTHO05D001848 2.5e-10 69.7 109 39.4
Cc07_g07600 Coffea canephora HOM05D023692 ORTHO05D001848 3.3e-10 69.3 107 43.0
Nitab4.5_0006325g0010 Nicotiana tabacum HOM05D002243 ORTHO05D001848 3.3e-10 69.3 112 40.2
GSVIVG01006594001 Vitis vinifera HOM05D002243 ORTHO05D001848 4.3e-10 68.9 80 46.2
Nitab4.5_0000396g0020 Nicotiana tabacum HOM05D002243 ORTHO05D001848 5.6e-10 68.6 156 34.6
Manes.18G052200 Manihot esculenta HOM05D002243 ORTHO05D001848 7.3e-10 68.2 214 27.1
Aqoxy5G01944 Aquilegia oxysepala HOM05D002243 ORTHO05D001848 9.5e-10 67.8 97 40.2
Nitab4.5_0001477g0030 Nicotiana tabacum HOM05D002243 ORTHO05D001848 1.2e-09 67.4 105 39.0
Lj9P338T47 Lonicera japonica HOM05D002243 ORTHO05D001848 2.1e-09 66.6 90 38.9
Glyma.05G110000 Glycine max HOM05D002243 ORTHO05D001848 3.6e-09 65.9 76 47.4
Sabra07G0006700 Salix brachista HOM05D002243 ORTHO05D001848 3.6e-09 65.9 80 41.2
THA.LOC104799838 Tarenaya hassleriana HOM05D002243 ORTHO05D001848 3.6e-09 65.9 163 34.4
VMungo0251G3413 Vigna mungo HOM05D002243 ORTHO05D001848 3.6e-09 65.9 109 37.6
Nitab4.5_0007488g0020 Nicotiana tabacum HOM05D002243 ORTHO05D001848 4.7e-09 65.5 98 39.8
Dinv01223 Davidia involucrata HOM05D002243 ORTHO05D001848 6.2e-09 65.1 214 33.6
Eucgr.F02202 Eucalyptus grandis HOM05D002243 ORTHO05D001848 6.2e-09 65.1 95 37.9
Lj4g0010467 Lotus japonicus HOM05D002243 ORTHO05D001848 6.2e-09 65.1 97 39.2
CiPaw.05G022100 Carya illinoinensis HOM05D002243 ORTHO05D001848 8.0e-09 64.7 80 38.8
Solyc02g091890.3 Solanum lycopersicum HOM05D002243 ORTHO05D001848 8.0e-09 64.7 104 37.5
Sopen02g036460 Solanum pennellii HOM05D002243 ORTHO05D001848 8.0e-09 64.7 104 37.5
Ah.01g007180 Amaranthus hybridus HOM05D002243 ORTHO05D001848 1.1e-08 64.3 72 43.1
BcaC01g00374 Brassica carinata HOM05D002243 ORTHO05D001848 1.1e-08 64.3 99 41.4
BolC3t20144H Brassica oleracea HOM05D002243 ORTHO05D001848 1.1e-08 64.3 99 41.4
Eucgr.I00650 Eucalyptus grandis HOM05D002243 ORTHO05D001848 1.1e-08 64.3 91 40.7
FAN08G2076 Fragaria x ananassa HOM05D002243 ORTHO05D001848 1.1e-08 64.3 103 37.9
GSVIVG01037020001 Vitis vinifera HOM05D002243 ORTHO05D001848 1.1e-08 64.3 73 42.5
Actinidia36403 Actinidia chinensis HOM05D002243 ORTHO05D001848 1.4e-08 63.9 80 42.5
Phvul.003G231700 Phaseolus vulgaris HOM05D002243 ORTHO05D001848 1.4e-08 63.9 80 42.5
Potri.007G008600 Populus trichocarpa HOM05D002243 ORTHO05D001848 1.4e-08 63.9 82 42.7
CiPaw.06G162700 Carya illinoinensis HOM05D002243 ORTHO05D001848 1.8e-08 63.5 90 35.6
Glyma.17G157100 Glycine max HOM05D002243 ORTHO05D001848 1.8e-08 63.5 80 43.8
Hma1.2p1_1953F.1_g308845 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 1.8e-08 63.5 98 39.8
Hma1.2p1_1953F.1_g308850 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 1.8e-08 63.5 98 39.8
Lj5P222T65 Lonicera japonica HOM05D002243 ORTHO05D001848 1.8e-08 63.5 105 34.3
Medtr4g097790 Medicago truncatula HOM05D002243 ORTHO05D001848 1.8e-08 63.5 105 35.2
Psat0s3779g0120 Pisum sativum HOM05D016095 ORTHO05D001848 1.8e-08 63.5 111 36.0
CSS0016364 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 2.3e-08 63.2 80 40.0
Rhsim11G0148900 Rhododendron simsii HOM05D002243 ORTHO05D001848 2.3e-08 63.2 80 37.5
Ca_28397_v3 Cicer arietinum L. HOM05D002243 ORTHO05D001848 3.1e-08 62.8 109 37.6
Potri.002G112800 Populus trichocarpa HOM05D002243 ORTHO05D001848 3.1e-08 62.8 213 28.2
PGR004G1094 Punica granatum HOM05D002243 ORTHO05D001848 3.1e-08 62.8 98 38.8
Sabra09G0064600 Salix brachista HOM05D002243 ORTHO05D001848 3.1e-08 62.8 103 35.0
PGSC0003DMG400030665 Solanum tuberosum HOM05D002243 ORTHO05D001848 3.1e-08 62.8 174 31.6
CANSAT25G2495 Cannabis sativa HOM05D002243 ORTHO05D001848 4.0e-08 62.4 76 43.4
Ca_22085_v3 Cicer arietinum L. HOM05D002243 ORTHO05D001848 4.0e-08 62.4 109 37.6
MBI16_g31808_MAGBIO Magnolia biondii HOM05D002243 ORTHO05D001848 4.0e-08 62.4 77 45.5
Peaxi162Scf00016g03211 Petunia axillaris HOM05D002243 ORTHO05D001848 4.0e-08 62.4 105 36.2
RcHm_v2.0_Chr7g0232141 Rosa chinensis HOM05D002243 ORTHO05D001848 4.0e-08 62.4 109 35.8
CSS0022177 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 5.2e-08 62.0 80 38.8
Cfa006795 Carpinus fangiana HOM05D002243 ORTHO05D001848 5.2e-08 62.0 98 39.8
Manes.07G051400 Manihot esculenta HOM05D002243 ORTHO05D001848 5.2e-08 62.0 104 34.6
Eucgr.G01184 Eucalyptus grandis HOM05D002243 ORTHO05D001848 6.8e-08 61.6 102 39.2
FAN18G0601 Fragaria x ananassa HOM05D002243 ORTHO05D001848 6.8e-08 61.6 76 40.8
Psat4g088240 Pisum sativum HOM05D002243 ORTHO05D001848 6.8e-08 61.6 120 35.0
Carub.0007s0242 Capsella rubella HOM05D002243 ORTHO05D001848 8.9e-08 61.2 94 42.6
COL.COLO4_17804 Corchorus olitorius HOM05D002243 ORTHO05D001848 8.9e-08 61.2 181 33.1
FvH4_5g33410 Fragaria vesca HOM05D002243 ORTHO05D001848 8.9e-08 61.2 76 40.8
Gorai.008G087300 Gossypium raimondii HOM05D002243 ORTHO05D001848 8.9e-08 61.2 156 33.3
C03p79030 Brassica napus HOM05D002243 ORTHO05D001848 1.2e-07 60.8 104 39.4
Duzib187G1983 Durio zibethinus HOM05D002243 ORTHO05D001848 1.2e-07 60.8 59 47.5
Actinidia02430 Actinidia chinensis HOM05D002243 ORTHO05D001848 1.5e-07 60.5 80 41.2
CANSAT21G1644 Cannabis sativa HOM05D002243 ORTHO05D001848 1.5e-07 60.5 221 28.1
DCAR_001867 Daucus carota HOM05D002243 ORTHO05D001848 1.5e-07 60.5 105 36.2
Glyma.11G002700 Glycine max HOM05D002243 ORTHO05D001848 1.5e-07 60.5 76 38.2
Lalb_Chr09g0329371 Lupinus albus HOM05D002243 ORTHO05D001848 1.5e-07 60.5 108 29.6
Potri.009G083900 Populus trichocarpa HOM05D002243 ORTHO05D001848 1.5e-07 60.5 98 36.7
Prupe.6G213200 Prunus persica HOM05D002243 ORTHO05D001848 1.5e-07 60.5 104 38.5
CiPaw.07G039400 Carya illinoinensis HOM05D002243 ORTHO05D001848 2.0e-07 60.1 131 38.2
Dinv09523 Davidia involucrata HOM05D002243 ORTHO05D001848 2.0e-07 60.1 222 29.3
Gohir.D03G032300 Gossypium hirsutum HOM05D002243 ORTHO05D001848 2.0e-07 60.1 95 41.1
Lj2A425T27 Lonicera japonica HOM05D002243 ORTHO05D001848 2.0e-07 60.1 104 35.6
Lalb_Chr06g0164961 Lupinus albus HOM05D002243 ORTHO05D001848 2.0e-07 60.1 95 36.8
TPR.G22426 Trifolium pratense HOM05D002243 ORTHO05D001848 2.0e-07 60.1 106 35.8
CARHR114080 Cardamine hirsuta HOM05D002243 ORTHO05D001848 2.6e-07 59.7 100 40.0
Haze_03961 Corylus avellana HOM05D002243 ORTHO05D001848 2.6e-07 59.7 98 39.8
Duzib147G0075 Durio zibethinus HOM05D002243 ORTHO05D001848 2.6e-07 59.7 99 39.4
Glyma.04G087600 Glycine max HOM05D016095 ORTHO05D029748 2.6e-07 59.7 137 42.3
Nitab4.5_0002415g0010 Nicotiana tabacum HOM05D002243 ORTHO05D001848 2.6e-07 59.7 131 32.8
TWI14G1334 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 2.6e-07 59.7 74 43.2
Nitab4.5_0001614g0090 Nicotiana tabacum HOM05D002243 ORTHO05D001848 3.4e-07 59.3 137 30.7
Ah.01g024500 Amaranthus hybridus HOM05D002243 ORTHO05D001848 4.4e-07 58.9 72 38.9
BcaC09g52185 Brassica carinata HOM05D010391 ORTHO05D001848 4.4e-07 58.9 76 39.5
C01p04980 Brassica napus HOM05D010391 ORTHO05D001848 4.4e-07 58.9 76 39.5
BolC1t00479H Brassica oleracea HOM05D010391 ORTHO05D001848 4.4e-07 58.9 76 39.5
Lj5g0020290 Lotus japonicus HOM05D002243 ORTHO05D001848 4.4e-07 58.9 104 32.7
Peaxi162Scf00628g00052 Petunia axillaris HOM05D002243 ORTHO05D001848 4.4e-07 58.9 139 30.9
TWI59G0771 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 4.4e-07 58.9 74 41.9
TWI77G0733 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 4.4e-07 58.9 81 38.3
BcaNung04675 Brassica carinata HOM05D010391 ORTHO05D001848 5.8e-07 58.5 76 39.5
CAN.G504.9 Capsicum annuum HOM05D002243 ORTHO05D001848 5.8e-07 58.5 105 35.2
Gohir.A12G081200 Gossypium hirsutum HOM05D002243 ORTHO05D001848 5.8e-07 58.5 158 38.0
Lalb_Chr05g0220451 Lupinus albus HOM05D002243 ORTHO05D001848 5.8e-07 58.5 144 29.9
HPP92_015701 Vanilla planifolia HOM05D002243 ORTHO05D001848 5.8e-07 58.5 112 33.0
HPP92_026661 Vanilla planifolia HOM05D002243 ORTHO05D001848 5.8e-07 58.5 112 33.0
Atru.chr5.2225 Acer truncatum HOM05D002243 ORTHO05D001848 7.5e-07 58.2 74 40.5
A01p04590 Brassica napus HOM05D010391 ORTHO05D001848 7.5e-07 58.2 83 38.6
A03p62300 Brassica napus HOM05D010391 ORTHO05D001848 7.5e-07 58.2 97 36.1
Dinv26979 Davidia involucrata HOM05D002243 ORTHO05D001848 7.5e-07 58.2 147 36.7
Peaxi162Scf00152g00066 Petunia axillaris HOM05D002243 ORTHO05D001848 7.5e-07 58.2 79 36.7
Rhsim10G0087400 Rhododendron simsii HOM05D002243 ORTHO05D001848 7.5e-07 58.2 140 42.1
Atru.chr13.906 Acer truncatum HOM05D002243 ORTHO05D001848 9.8e-07 57.8 104 36.5
Aa31LG7G14010 Aethionema arabicum HOM05D002243 ORTHO05D001848 9.8e-07 57.8 97 35.1
BraA01t00442Z Brassica rapa HOM05D010391 ORTHO05D001848 9.8e-07 57.8 83 38.6
CAN.G416.47 Capsicum annuum HOM05D002243 ORTHO05D001848 9.8e-07 57.8 131 34.4
CDE02G1478 Ceratophyllum demersum HOM05D064956 ORTHO05D001848 9.8e-07 57.8 181 31.5
Lalb_Chr16g0385891 Lupinus albus HOM05D002243 ORTHO05D001848 9.8e-07 57.8 162 34.6
Sc14g0002480 Simmondsia chinensis HOM05D002243 ORTHO05D001848 9.8e-07 57.8 72 43.1
PGSC0003DMG400005118 Solanum tuberosum HOM05D002243 ORTHO05D001848 9.8e-07 57.8 98 37.8
BraA04t17359Z Brassica rapa HOM05D002243 ORTHO05D001848 1.3e-06 57.4 105 38.1
SalBow6G2660 Salvia bowleyana HOM05D002243 ORTHO05D001848 1.3e-06 57.4 95 33.7
SalBow6G4432 Salvia bowleyana HOM05D002243 ORTHO05D001848 1.3e-06 57.4 95 33.7
Sopen01g049010 Solanum pennellii HOM05D002243 ORTHO05D001848 1.3e-06 57.4 107 37.4
TAR376G0696 Trochodendron aralioides HOM05D002243 ORTHO05D001848 1.3e-06 57.4 197 32.5
BcaC02g08599 Brassica carinata HOM05D002243 ORTHO05D001848 1.7e-06 57.0 105 38.1
C04p52120 Brassica napus HOM05D002243 ORTHO05D001848 1.7e-06 57.0 105 38.1
BolC4t26786H Brassica oleracea HOM05D002243 ORTHO05D001848 1.7e-06 57.0 105 38.1
CSS0029796 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 1.7e-06 57.0 229 24.0
ClCG01G017950 Citrullus lanatus HOM05D002243 ORTHO05D001848 1.7e-06 57.0 107 35.5
Gohir.D12G078400 Gossypium hirsutum HOM05D002243 ORTHO05D001848 1.7e-06 57.0 156 35.3
Hma1.2p1_2654F.1_g326230 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 1.7e-06 57.0 76 40.8
MD02G1193800 Malus domestica HOM05D002243 ORTHO05D001848 1.7e-06 57.0 108 34.3
MD10G1112600 Malus domestica HOM05D002243 ORTHO05D001848 1.7e-06 57.0 98 37.8
vmacro01929 Vaccinium macrocarpon HOM05D002243 ORTHO05D001848 1.7e-06 57.0 101 36.6
MSTRG.20241 Avicennia marina HOM05D002243 ORTHO05D001848 2.2e-06 56.6 111 33.3
HanXRQChr09g0263091 Helianthus annuus HOM05D002243 ORTHO05D001848 2.2e-06 56.6 104 34.6
Solyc01g106680.4 Solanum lycopersicum HOM05D002243 ORTHO05D001848 2.2e-06 56.6 107 37.4
THA.LOC104807202 Tarenaya hassleriana HOM05D010391 ORTHO05D001848 2.2e-06 56.6 68 41.2
THA.LOC104807645 Tarenaya hassleriana HOM05D002243 ORTHO05D001848 2.2e-06 56.6 93 38.7
Zm00001eb055870 Zea mays HOM05D034594 ORTHO05D001848 2.2e-06 56.6 104 37.5
Atru.chr3.1086 Acer truncatum HOM05D002243 ORTHO05D001848 2.9e-06 56.2 91 40.7
CARHR246210 Cardamine hirsuta HOM05D002243 ORTHO05D001848 2.9e-06 56.2 95 40.0
DCAR_019339 Daucus carota HOM05D002243 ORTHO05D001848 2.9e-06 56.2 138 32.6
Thhalv10000072m.g Eutrema salsugineum HOM05D002243 ORTHO05D001848 2.9e-06 56.2 144 30.6
QL06p038195 Quercus lobata HOM05D002243 ORTHO05D001848 2.9e-06 56.2 155 32.3
RcHm_v2.0_Chr1g0336871 Rosa chinensis HOM05D002243 ORTHO05D001848 2.9e-06 56.2 74 43.2
SGA_v2.0_scaffold342G49428 Striga asiatica HOM05D002243 ORTHO05D001848 2.9e-06 56.2 73 45.2
Thecc.08G081200 Theobroma cacao HOM05D002243 ORTHO05D001848 2.9e-06 56.2 196 31.6
AT4G33740 Arabidopsis thaliana HOM05D010391 ORTHO05D001848 3.7e-06 55.8 76 39.5
Lsat_1_v5_gn_6_108800 Lactuca sativa HOM05D002243 ORTHO05D001848 3.7e-06 55.8 109 35.8
Manes.10G087900 Manihot esculenta HOM05D002243 ORTHO05D001848 3.7e-06 55.8 103 33.0
Manes.12G119100 Manihot esculenta HOM05D002243 ORTHO05D001848 3.7e-06 55.8 74 39.2
Medtr5g005430 Medicago truncatula HOM05D002243 ORTHO05D001848 3.7e-06 55.8 76 36.8
Oeu039769.1 Olea europaea HOM05D002243 ORTHO05D001848 3.7e-06 55.8 123 35.0
Prupe.8G152300 Prunus persica HOM05D002243 ORTHO05D001848 3.7e-06 55.8 97 36.1
A04p17320 Brassica napus HOM05D002243 ORTHO05D001848 4.9e-06 55.5 105 37.1
BraA03t15271Z Brassica rapa HOM05D010391 ORTHO05D001848 4.9e-06 55.5 91 36.3
CARHR241840 Cardamine hirsuta HOM05D010391 ORTHO05D001848 4.9e-06 55.5 77 39.0
Sp7g31490 Schrenkiella parvula HOM05D010391 ORTHO05D001848 4.9e-06 55.5 77 40.3
THA.LOC104819521 Tarenaya hassleriana HOM05D010391 ORTHO05D001848 4.9e-06 55.5 99 34.3
Thecc.01G079600 Theobroma cacao HOM05D002243 ORTHO05D001848 4.9e-06 55.5 141 31.9
Aa31sc178G50 Aethionema arabicum HOM05D010391 ORTHO05D001848 6.4e-06 55.1 73 37.0
AT4G37820 Arabidopsis thaliana HOM05D002243 ORTHO05D001848 6.4e-06 55.1 94 35.1
BcaNung04324 Brassica carinata HOM05D010391 ORTHO05D001848 6.4e-06 55.1 75 38.7
BraA09t41115Z Brassica rapa HOM05D002243 ORTHO05D001848 6.4e-06 55.1 143 33.6
Thhalv10024837m.g Eutrema salsugineum HOM05D002243 ORTHO05D001848 6.4e-06 55.1 97 36.1
Thhalv10025138m.g Eutrema salsugineum HOM05D010391 ORTHO05D001848 6.4e-06 55.1 76 38.2
VMungo1215G3316 Vigna mungo HOM05D002243 ORTHO05D001848 6.4e-06 55.1 105 32.4
A08p22860 Brassica napus HOM05D002243 ORTHO05D001848 8.3e-06 54.7 101 39.6
BraA08t34249Z Brassica rapa HOM05D002243 ORTHO05D001848 8.3e-06 54.7 101 39.6
Ciclev10028128m.g Citrus clementina HOM05D002243 ORTHO05D001848 8.3e-06 54.7 131 37.4
MELO3C018032.2 Cucumis melo HOM05D002243 ORTHO05D001848 8.3e-06 54.7 80 32.5
Sed0002291 Sechium edule HOM05D002243 ORTHO05D372814 8.3e-06 54.7 104 29.8
PGSC0003DMG400004935 Solanum tuberosum HOM05D002243 ORTHO05D001848 8.3e-06 54.7 131 36.6


User provided reference genes

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