Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0064341 Lupinus albus HOM05D003091 ORTHO05D003671 1.3e-61 239.6 122 100.0
Lalb_Chr23g0269441 Lupinus albus HOM05D003091 ORTHO05D003671 1.2e-43 179.9 102 88.2
Ca_15619_v3 Cicer arietinum L. HOM05D003091 ORTHO05D003671 1.6e-43 179.5 103 90.3
Ca_12810_v3 Cicer arietinum L. HOM05D003091 ORTHO05D003671 6.0e-43 177.6 102 88.2
Lalb_Chr08g0243271 Lupinus albus HOM05D003091 ORTHO05D003671 6.0e-43 177.6 102 87.3
Psat6g034320 Pisum sativum HOM05D003091 ORTHO05D003671 1.7e-42 176.0 102 87.3
Glyma.14G142100 Glycine max HOM05D003091 ORTHO05D003671 2.3e-42 175.6 103 88.3
Medtr3g109932 Medicago truncatula HOM05D003091 ORTHO05D003671 8.6e-42 173.7 103 87.4
Medtr3g109968 Medicago truncatula HOM05D003091 ORTHO05D003671 8.6e-42 173.7 103 87.4
VMungo1309G1449 Vigna mungo HOM05D003091 ORTHO05D003671 8.6e-42 173.7 102 88.2
Glyma.04G080200 Glycine max HOM05D003091 ORTHO05D003671 2.5e-41 172.2 103 85.4
Glyma.06G081900 Glycine max HOM05D003091 ORTHO05D003671 4.3e-41 171.4 103 85.4
Phvul.009G106300 Phaseolus vulgaris HOM05D003091 ORTHO05D003671 4.3e-41 171.4 102 86.3
CiPaw.08G023500 Carya illinoinensis HOM05D003091 ORTHO05D003671 5.6e-41 171.0 102 84.3
Lj1g0011096 Lotus japonicus HOM05D003091 ORTHO05D003671 9.5e-41 170.2 103 84.5
Medtr1g008280 Medicago truncatula HOM05D003091 ORTHO05D003671 1.2e-40 169.9 103 84.5
TPR.G12114 Trifolium pratense HOM05D003091 ORTHO05D003671 2.1e-40 169.1 101 86.1
Psat0s3378g0040 Pisum sativum HOM05D003091 ORTHO05D003671 4.7e-40 167.9 104 83.7
Rhsim01G0194700 Rhododendron simsii HOM05D003091 ORTHO05D003671 8.1e-40 167.2 102 81.4
Prupe.1G452500 Prunus persica HOM05D003091 ORTHO05D003671 1.4e-39 166.4 103 84.5
arahy.Tifrunner.gnm1.ann1.H5V5GF Arachis hypogaea HOM05D003091 ORTHO05D003671 2.3e-39 165.6 104 81.7
CSS0001188 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 2.3e-39 165.6 102 83.3
CSS0007409 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 2.3e-39 165.6 102 83.3
arahy.Tifrunner.gnm1.ann1.Y550S7 Arachis hypogaea HOM05D003091 ORTHO05D003671 4.0e-39 164.9 103 82.5
Dinv36179 Davidia involucrata HOM05D003091 ORTHO05D003671 5.2e-39 164.5 102 80.4
COL.COLO4_05198 Corchorus olitorius HOM05D003091 ORTHO05D003671 6.8e-39 164.1 103 83.5
MD15G1097600 Malus domestica HOM05D003091 ORTHO05D003671 8.9e-39 163.7 103 83.5
Oeu043280.2 Olea europaea HOM05D003091 ORTHO05D003671 8.9e-39 163.7 102 80.4
Sopen11g024530 Solanum pennellii HOM05D003091 ORTHO05D003671 8.9e-39 163.7 102 81.4
vmacro04023 Vaccinium macrocarpon HOM05D003091 ORTHO05D003671 8.9e-39 163.7 102 82.4
Actinidia23988 Actinidia chinensis HOM05D003091 ORTHO05D003671 1.2e-38 163.3 102 83.3
PGSC0003DMG400009454 Solanum tuberosum HOM05D003091 ORTHO05D003671 1.2e-38 163.3 102 81.4
arahy.Tifrunner.gnm1.ann1.0Z0DIR Arachis hypogaea HOM05D003091 ORTHO05D003671 1.5e-38 162.9 103 81.6
MSTRG.17631 Avicennia marina HOM05D003091 ORTHO05D003671 1.5e-38 162.9 102 80.4
Cfa013345 Carpinus fangiana HOM05D003091 ORTHO05D003671 1.5e-38 162.9 103 82.5
Haze_21853 Corylus avellana HOM05D003091 ORTHO05D003671 1.5e-38 162.9 103 82.5
Ciclev10015833m.g Citrus clementina HOM05D003091 ORTHO05D003671 2.0e-38 162.5 104 81.7
Solyc11g064790.2 Solanum lycopersicum HOM05D003091 ORTHO05D003671 2.0e-38 162.5 102 81.4
CAN.G96.11 Capsicum annuum HOM05D003091 ORTHO05D003671 2.6e-38 162.2 102 80.4
Peaxi162Scf00004g04618 Petunia axillaris HOM05D003091 ORTHO05D003671 2.6e-38 162.2 102 81.4
Duzib168G2072 Durio zibethinus HOM05D003091 ORTHO05D003671 3.4e-38 161.8 103 81.6
CAN.G917.5 Capsicum annuum HOM05D003091 ORTHO05D003671 4.4e-38 161.4 102 81.4
Gohir.A05G071500 Gossypium hirsutum HOM05D003091 ORTHO05D003671 4.4e-38 161.4 103 83.5
Nitab4.5_0000730g0130 Nicotiana tabacum HOM05D003091 ORTHO05D003671 4.4e-38 161.4 100 81.0
Gorai.009G075500 Gossypium raimondii HOM05D003091 ORTHO05D003671 5.8e-38 161.0 103 82.5
GSVIVG01037261001 Vitis vinifera HOM05D003091 ORTHO05D003671 5.8e-38 161.0 103 81.6
Gohir.D05G074400 Gossypium hirsutum HOM05D003091 ORTHO05D003671 7.6e-38 160.6 103 82.5
Actinidia06957 Actinidia chinensis HOM05D003091 ORTHO05D003671 9.9e-38 160.2 102 81.4
CiPaw.07G207100 Carya illinoinensis HOM05D003091 ORTHO05D003671 9.9e-38 160.2 102 80.4
Duzib150G1361 Durio zibethinus HOM05D003091 ORTHO05D003671 9.9e-38 160.2 103 81.6
TWI60G1477 Tripterygium wilfordii HOM05D003091 ORTHO05D003671 9.9e-38 160.2 100 84.0
FvH4_2g36110 Fragaria vesca HOM05D003091 ORTHO05D003671 1.3e-37 159.8 103 81.6
FAN15G0484 Fragaria x ananassa HOM05D003091 ORTHO05D003671 1.3e-37 159.8 103 81.6
Oeu025901.1 Olea europaea HOM05D003091 ORTHO05D003671 1.3e-37 159.8 102 80.4
Peaxi162Scf00032g02617 Petunia axillaris HOM05D003091 ORTHO05D003671 2.2e-37 159.1 102 79.4
CSS0031638 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 2.9e-37 158.7 105 81.0
Hma1.2p1_0129F.1_g060120 Hydrangea macrophylla HOM05D003091 ORTHO05D003671 2.9e-37 158.7 102 81.4
Duzib170G0109 Durio zibethinus HOM05D003091 ORTHO05D003671 3.7e-37 158.3 103 79.6
Rhsim13G0211100 Rhododendron simsii HOM05D003091 ORTHO05D003671 6.4e-37 157.5 102 79.4
CSS0037821 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 8.3e-37 157.1 102 81.4
FAN27G0636 Fragaria x ananassa HOM05D003091 ORTHO05D003671 8.3e-37 157.1 103 80.6
RcHm_v2.0_Chr6g0305761 Rosa chinensis HOM05D003091 ORTHO05D003671 8.3e-37 157.1 104 81.7
Thecc.09G249800 Theobroma cacao HOM05D003091 ORTHO05D003671 8.3e-37 157.1 102 79.4
Cc01_g05530 Coffea canephora HOM05D003091 ORTHO05D003671 1.4e-36 156.4 102 79.4
Eucgr.J00700 Eucalyptus grandis HOM05D003091 ORTHO05D003671 1.9e-36 156.0 99 79.8
FAN20G1214 Fragaria x ananassa HOM05D003091 ORTHO05D003671 1.9e-36 156.0 103 79.6
PGR054G0002 Punica granatum HOM05D003091 ORTHO05D003671 2.4e-36 155.6 100 76.0
PGR119G0724 Punica granatum HOM05D003091 ORTHO05D003671 2.4e-36 155.6 100 76.0
Sc16g0011120 Simmondsia chinensis HOM05D003091 ORTHO05D003671 2.4e-36 155.6 103 77.7
PGSC0003DMG400022714 Solanum tuberosum HOM05D003091 ORTHO05D003671 2.4e-36 155.6 102 78.4
MD08G1118300 Malus domestica HOM05D003091 ORTHO05D003671 3.2e-36 155.2 103 80.6
TWI34G0762 Tripterygium wilfordii HOM05D003091 ORTHO05D003671 5.4e-36 154.5 109 78.0
HanXRQChr13g0388471 Helianthus annuus HOM05D003091 ORTHO05D003671 7.1e-36 154.1 103 77.7
Lsat_1_v5_gn_9_48160 Lactuca sativa HOM05D003091 ORTHO05D003671 7.1e-36 154.1 100 78.0
Potri.009G071600 Populus trichocarpa HOM05D003091 ORTHO05D003671 7.1e-36 154.1 103 76.7
SGA_v2.0_scaffold29G12260 Striga asiatica HOM05D003091 ORTHO05D003671 7.1e-36 154.1 102 78.4
Lsat_1_v5_gn_8_26901 Lactuca sativa HOM05D003091 ORTHO05D003671 1.2e-35 153.3 95 77.9
Lj1C287G1 Lonicera japonica HOM05D003091 ORTHO05D003671 1.6e-35 152.9 102 74.5
ECA233G4335 Erigeron canadensis HOM05D003091 ORTHO05D003671 2.1e-35 152.5 102 76.5
Manes.01G179800 Manihot esculenta HOM05D003091 ORTHO05D003671 2.1e-35 152.5 103 77.7
Sabra09G0053900 Salix brachista HOM05D003091 ORTHO05D003671 2.1e-35 152.5 101 76.2
unitig_27.g25006 Utricularia gibba HOM05D003091 ORTHO05D003671 2.1e-35 152.5 103 76.7
Potri.001G276700 Populus trichocarpa HOM05D003091 ORTHO05D003671 2.7e-35 152.1 103 76.7
SGA_v2.0_scaffold496G52467 Striga asiatica HOM05D003091 ORTHO05D003671 2.7e-35 152.1 102 75.5
HanXRQChr08g0216751 Helianthus annuus HOM05D003091 ORTHO05D003671 3.5e-35 151.8 102 76.5
Sopen01g004330 Solanum pennellii HOM05D003091 ORTHO05D003671 4.6e-35 151.4 102 76.5
TAR369G0586 Trochodendron aralioides HOM05D003091 ORTHO05D003671 4.6e-35 151.4 106 72.6
Migut.N02369 Erythranthe guttata HOM05D003091 ORTHO05D003671 6.0e-35 151.0 104 74.0
Manes.02G140400 Manihot esculenta HOM05D003091 ORTHO05D003671 6.0e-35 151.0 103 77.7
Sed0016432 Sechium edule HOM05D003091 ORTHO05D003671 6.0e-35 151.0 101 78.2
THA.LOC104826452 Tarenaya hassleriana HOM05D003091 ORTHO05D003671 7.8e-35 150.6 99 71.7
Solyc01g008820.3 Solanum lycopersicum HOM05D003091 ORTHO05D003671 1.0e-34 150.2 102 75.5
TAR633G0445 Trochodendron aralioides HOM05D003091 ORTHO05D003671 1.0e-34 150.2 107 72.9
DCAR_029992 Daucus carota HOM05D003091 ORTHO05D003671 1.3e-34 149.8 104 75.0
Gohir.D07G124800 Gossypium hirsutum HOM05D003091 ORTHO05D003671 1.3e-34 149.8 102 78.4
Gorai.001G134600 Gossypium raimondii HOM05D003091 ORTHO05D003671 1.3e-34 149.8 102 78.4
CANSAT25G3396 Cannabis sativa HOM05D003091 ORTHO05D003671 1.7e-34 149.4 102 77.5
MELO3C003581.2 Cucumis melo HOM05D003091 ORTHO05D003671 1.7e-34 149.4 101 77.2
CsaV3_3G047430 Cucumis sativus L. HOM05D003091 ORTHO05D003671 1.7e-34 149.4 101 77.2
Sed0002878 Sechium edule HOM05D003091 ORTHO05D003671 1.7e-34 149.4 99 75.8
CDE02G3432 Ceratophyllum demersum HOM05D003091 ORTHO05D003671 2.3e-34 149.1 97 78.4
Migut.D00654 Erythranthe guttata HOM05D003091 ORTHO05D003671 3.0e-34 148.7 102 76.5
Hund21985 Selenicereus undatus HOM05D003091 ORTHO05D003671 3.0e-34 148.7 105 75.2
EL10Ac4g10152 Beta vulgaris HOM05D003091 ORTHO05D003671 5.1e-34 147.9 105 72.4
Nn7g36666 Nelumbo nucifera HOM05D003091 ORTHO05D003671 5.1e-34 147.9 109 71.6
Sc16g0011130 Simmondsia chinensis HOM05D003091 ORTHO05D003671 6.6e-34 147.5 106 73.6
HPP92_020481 Vanilla planifolia HOM05D003091 ORTHO05D003671 8.6e-34 147.1 103 72.8
ClCG11G014020 Citrullus lanatus HOM05D003091 ORTHO05D003671 1.1e-33 146.7 101 76.2
Hund07443 Selenicereus undatus HOM05D003091 ORTHO05D003671 1.1e-33 146.7 86 83.7
EL10Ac4g10135 Beta vulgaris HOM05D003091 ORTHO05D003671 1.5e-33 146.4 104 72.1
TPR.G1379 Trifolium pratense HOM05D003091 ORTHO05D003671 1.5e-33 146.4 77 90.9
TAR623G1108 Trochodendron aralioides HOM05D003091 ORTHO05D003671 1.5e-33 146.4 106 70.8
Aqoxy2G00365 Aquilegia oxysepala HOM05D003091 ORTHO05D003671 2.5e-33 145.6 106 74.5
AUR62006534 Chenopodium quinoa HOM05D003091 ORTHO05D003671 2.5e-33 145.6 105 70.5
Ah.04g161990 Amaranthus hybridus HOM05D003091 ORTHO05D003671 3.3e-33 145.2 110 70.9
ECA232G2856 Erigeron canadensis HOM05D003091 ORTHO05D003671 3.3e-33 145.2 103 72.8
AL5G12770 Arabidopsis lyrata HOM05D003091 ORTHO05D003671 5.6e-33 144.4 85 80.0
AT2G03120 Arabidopsis thaliana HOM05D003091 ORTHO05D003671 5.6e-33 144.4 100 70.0
CARHR145460 Cardamine hirsuta HOM05D003091 ORTHO05D003671 5.6e-33 144.4 101 72.3
Carub.0005s0195 Capsella rubella HOM05D003091 ORTHO05D003671 9.6e-33 143.7 100 71.0
AUR62000182 Chenopodium quinoa HOM05D003091 ORTHO05D003671 9.6e-33 143.7 105 69.5
MBI19_g22255_MAGBIO Magnolia biondii HOM05D003091 ORTHO05D003671 1.2e-32 143.3 113 67.3
SEGI_37865 Sequoiadendron giganteum HOM05D003091 ORTHO05D003671 1.2e-32 143.3 94 71.3
Gohir.A13G219200 Gossypium hirsutum HOM05D003091 ORTHO05D003671 2.1e-32 142.5 103 72.8
BcaC06g34018 Brassica carinata HOM05D003091 ORTHO05D003671 2.8e-32 142.1 93 76.3
BolC7t43877H Brassica oleracea HOM05D003091 ORTHO05D003671 2.8e-32 142.1 93 76.3
THA.LOC104816927 Tarenaya hassleriana HOM05D003091 ORTHO05D003671 3.6e-32 141.7 101 71.3
PSO339G4627 Papaver somniferum HOM05D003091 ORTHO05D003671 4.7e-32 141.4 114 68.4
A06p43280 Brassica napus HOM05D003091 ORTHO05D003671 6.2e-32 141.0 93 75.3
BraA06t27214Z Brassica rapa HOM05D003091 ORTHO05D003671 6.2e-32 141.0 93 75.3
Thhalv10004551m.g Eutrema salsugineum HOM05D003091 ORTHO05D003671 6.2e-32 141.0 88 76.1
MBI13_g30131_MAGBIO Magnolia biondii HOM05D003091 ORTHO05D003671 8.1e-32 140.6 86 77.9
Sp2g14090 Schrenkiella parvula HOM05D003091 ORTHO05D003671 1.1e-31 140.2 85 77.6
Os02g0117400 Oryza sativa ssp. japonica HOM05D003091 ORTHO05D003671 1.4e-31 139.8 105 66.7
PSO384G1550 Papaver somniferum HOM05D003091 ORTHO05D003671 1.8e-31 139.4 119 63.9
A02p33230 Brassica napus HOM05D003091 ORTHO05D003671 2.4e-31 139.0 100 69.0
Ah.06g194480 Amaranthus hybridus HOM05D000189 ORTHO05D000474 3.1e-31 138.7 101 71.3
BcaC03g17184 Brassica carinata HOM05D003091 ORTHO05D003671 3.1e-31 138.7 101 66.3
BcaB07g30310 Brassica carinata HOM05D003091 ORTHO05D003671 5.2e-31 137.9 100 69.0
BcaB07g30686 Brassica carinata HOM05D003091 ORTHO05D003671 5.2e-31 137.9 99 68.7
C02p51130 Brassica napus HOM05D003091 ORTHO05D003671 5.2e-31 137.9 103 68.0
BolC2t11200H Brassica oleracea HOM05D003091 ORTHO05D003671 5.2e-31 137.9 98 70.4
BraA02t08347Z Brassica rapa HOM05D003091 ORTHO05D003671 5.2e-31 137.9 98 70.4
BcaC04g21506 Brassica carinata HOM05D003091 ORTHO05D003671 6.8e-31 137.5 99 68.7
A09p24090 Brassica napus HOM05D003091 ORTHO05D003671 6.8e-31 137.5 99 68.7
C09p30980 Brassica napus HOM05D003091 ORTHO05D003671 6.8e-31 137.5 99 68.7
BolC9t55957H Brassica oleracea HOM05D003091 ORTHO05D003671 6.8e-31 137.5 99 68.7
BcaC06g31199 Brassica carinata HOM05D003091 ORTHO05D003671 1.2e-30 136.7 90 73.3
Nitab4.5_0001500g0090 Nicotiana tabacum HOM05D003091 ORTHO05D003671 1.2e-30 136.7 75 86.7
Aa31LG10G9280 Aethionema arabicum HOM05D003091 ORTHO05D003671 3.4e-30 135.2 84 76.2
BraA09t38009Z Brassica rapa HOM05D003091 ORTHO05D003671 3.4e-30 135.2 99 67.7
Nitab4.5_0005212g0030 Nicotiana tabacum HOM05D003091 ORTHO05D003671 7.6e-30 134.0 75 84.0
Nitab4.5_0000718g0270 Nicotiana tabacum HOM05D003091 ORTHO05D003671 9.9e-30 133.7 75 82.7
DCAR_002102 Daucus carota HOM05D003091 ORTHO05D003671 1.1e-28 130.2 80 76.2
Mapoly0057s0081 Marchantia polymorpha HOM05D003091 ORTHO05D003671 1.1e-28 130.2 101 66.3
Zm00001eb209380 Zea mays HOM05D003091 ORTHO05D003671 1.1e-28 130.2 109 61.5
C07p33670 Brassica napus HOM05D003091 ORTHO05D003671 3.2e-28 128.6 75 81.3
ATR0580G276 Amborella trichopoda HOM05D003091 ORTHO05D003671 5.4e-28 127.9 94 66.0
Pp3c3_24000 Physcomitrium patens HOM05D003091 ORTHO05D003671 1.9e-25 119.4 91 64.8
Pp3c3_24020 Physcomitrium patens HOM05D003091 ORTHO05D003671 1.9e-25 119.4 91 64.8
SMO172G0078 Selaginella moellendorffii HOM05D003091 ORTHO05D003671 5.6e-25 117.9 104 60.6
CBR_g39566 Chara braunii HOM05D003091 ORTHO05D003671 4.8e-24 114.8 101 56.4
Nn2g14838 Nelumbo nucifera HOM05D003091 ORTHO05D003671 9.6e-17 90.5 108 53.7
arahy.Tifrunner.gnm1.ann1.VUH5K0 Arachis hypogaea HOM05D003091 ORTHO05D003671 1.6e-16 89.7 99 55.6
Gohir.A07G120600 Gossypium hirsutum HOM05D003091 ORTHO05D003671 4.8e-16 88.2 102 55.9
Atru.chr3.2779 Acer truncatum HOM05D003091 ORTHO05D003671 8.1e-16 87.4 56 73.2
MSTRG.12446 Avicennia marina HOM05D003091 ORTHO05D003671 8.1e-16 87.4 51 80.4
arahy.Tifrunner.gnm1.ann1.APBA8N Arachis hypogaea HOM05D003091 ORTHO05D003671 1.8e-15 86.3 65 70.8
PSO063G2975 Papaver somniferum HOM05D003091 ORTHO05D003671 1.8e-15 86.3 108 47.2
Cpa.g.sc84.1 Carica papaya HOM05D003091 ORTHO05D003671 5.3e-15 84.7 62 69.4
Cre07.g332550 Chlamydomonas reinhardtii HOM05D003091 ORTHO05D003671 5.3e-15 84.7 83 51.8
PRCOL_00004266 Prasinoderma coloniale HOM05D003091 ORTHO05D003671 9.0e-15 84.0 105 45.7
Cc00_g32870 Coffea canephora HOM05D003091 ORTHO05D003671 1.2e-14 83.6 55 70.9
Cc03_g10790 Coffea canephora HOM05D003091 ORTHO05D003671 1.5e-14 83.2 75 58.7
Gorai.013G254000 Gossypium raimondii HOM05D003091 ORTHO05D003671 1.5e-14 83.2 86 54.7
Gohir.D13G222900 Gossypium hirsutum HOM05D003091 ORTHO05D003671 4.5e-14 81.6 86 54.7
Gohir.D13G223201 Gossypium hirsutum HOM05D003091 ORTHO05D003671 4.5e-14 81.6 43 86.0
TPR.G30556 Trifolium pratense HOM05D003091 ORTHO05D003671 1.9e-12 76.3 48 75.0
Haze_26116 Corylus avellana HOM05D003091 ORTHO05D003671 8.7e-10 67.4 95 40.0
AagrBONN_evm.TU.Sc2ySwM_228.3527 Anthoceros agrestis HOM05D003091 ORTHO05D003671 2.5e-09 65.9 52 63.5
SEGI_25645 Sequoiadendron giganteum HOM05D001167 ORTHO05D001054 2.0e-06 56.2 89 36.0


User provided reference genes

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