Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0064261 Lupinus albus HOM05D005081 ORTHO05D005506 4.5e-129 464.5 223 100.0
Glyma.04G077700 Glycine max HOM05D027503 ORTHO05D005506 4.6e-33 145.6 147 54.4
Glyma.06G078900 Glycine max HOM05D027503 ORTHO05D005506 1.5e-28 130.6 177 46.9
Prupe.1G455900 Prunus persica HOM05D005081 ORTHO05D005506 1.1e-26 124.4 226 38.5
Psat2g035320 Pisum sativum HOM05D027503 ORTHO05D005506 1.1e-23 114.4 203 41.4
MD15G1102900 Malus domestica HOM05D005081 ORTHO05D005506 5.6e-23 112.1 212 40.6
QL12p025899 Quercus lobata HOM05D005081 ORTHO05D005506 4.8e-22 109.0 244 36.9
FAN15G2850 Fragaria x ananassa HOM05D026897 ORTHO05D005506 9.0e-21 104.8 207 34.3
MD08G1124200 Malus domestica HOM05D005081 ORTHO05D005506 2.6e-20 103.2 221 36.7
Thecc.09G002900 Theobroma cacao HOM05D005081 ORTHO05D005506 5.8e-20 102.1 235 34.5
RcHm_v2.0_Chr6g0305451 Rosa chinensis HOM05D005081 ORTHO05D005506 1.7e-19 100.5 154 40.3
FvH4_2g36450 Fragaria vesca HOM05D026897 ORTHO05D005506 2.9e-19 99.8 210 32.9
FAN27G3206 Fragaria x ananassa HOM05D026897 ORTHO05D005506 2.9e-19 99.8 210 32.9
GSVIVG01035163001 Vitis vinifera HOM05D005081 ORTHO05D005506 3.8e-19 99.4 225 35.6
HanXRQChr03g0067191 Helianthus annuus HOM05D005081 ORTHO05D005506 1.1e-18 97.8 225 33.3
TAR625G0352 Trochodendron aralioides HOM05D005081 ORTHO05D005506 1.1e-18 97.8 237 35.4
FAN20G0355 Fragaria x ananassa HOM05D026897 ORTHO05D005506 3.2e-18 96.3 156 37.8
TPR.G12452 Trifolium pratense HOM05D027503 ORTHO05D005506 3.2e-18 96.3 110 54.5
Duzib168G0721 Durio zibethinus HOM05D005081 ORTHO05D005506 4.2e-18 95.9 241 34.0
TAR383G1035 Trochodendron aralioides HOM05D005081 ORTHO05D005506 4.6e-17 92.4 236 34.7
Nitab4.5_0010835g0010 Nicotiana tabacum HOM05D005081 ORTHO05D005506 1.0e-16 91.3 233 31.8
PGSC0003DMG400013692 Solanum tuberosum HOM05D005081 ORTHO05D005506 5.1e-16 89.0 234 30.8
QL11p009451 Quercus lobata HOM05D005081 ORTHO05D005506 4.3e-15 85.9 221 34.4
Actinidia38513 Actinidia chinensis HOM05D005081 ORTHO05D005506 5.6e-15 85.5 226 32.3
Medtr8g101480 Medicago truncatula HOM05D005081 ORTHO05D005506 7.4e-15 85.1 193 33.7
Manes.15G189400 Manihot esculenta HOM05D005081 ORTHO05D005506 1.3e-14 84.3 225 31.6
Oeu044689.1 Olea europaea HOM05D005081 ORTHO05D005506 1.3e-14 84.3 232 31.5
RcHm_v2.0_Chr4g0398241 Rosa chinensis HOM05D005081 ORTHO05D005506 1.6e-14 84.0 227 30.0
MBI16_g18201_MAGBIO Magnolia biondii HOM05D005081 ORTHO05D005506 2.8e-14 83.2 243 32.5
Rhsim01G0113200 Rhododendron simsii HOM05D005081 ORTHO05D005506 2.8e-14 83.2 236 31.8
Oeu008926.1 Olea europaea HOM05D005081 ORTHO05D005506 3.7e-14 82.8 238 31.9
Peaxi162Scf00315g00813 Petunia axillaris HOM05D005081 ORTHO05D005506 6.2e-14 82.0 234 30.8
CiPaw.15G154600 Carya illinoinensis HOM05D005081 ORTHO05D005506 1.1e-13 81.3 232 31.9
Nitab4.5_0000833g0060 Nicotiana tabacum HOM05D005081 ORTHO05D005506 1.1e-13 81.3 247 30.4
Lsat_1_v5_gn_7_59220 Lactuca sativa HOM05D005081 ORTHO05D005506 2.4e-13 80.1 232 32.3
Aqoxy7G02679 Aquilegia oxysepala HOM05D005081 ORTHO05D005506 3.1e-13 79.7 239 32.6
vmacro20793 Vaccinium macrocarpon HOM05D005081 ORTHO05D005506 5.3e-13 79.0 238 30.7
Thecc.09G189400 Theobroma cacao HOM05D005081 ORTHO05D005506 6.9e-13 78.6 213 32.9
Actinidia29969 Actinidia chinensis HOM05D005081 ORTHO05D005506 9.0e-13 78.2 239 31.0
Hma1.2p1_0022F.1_g014783 Hydrangea macrophylla HOM05D005081 ORTHO05D005506 9.0e-13 78.2 234 31.6
Solyc05g046310.3 Solanum lycopersicum HOM05D005081 ORTHO05D005506 9.0e-13 78.2 242 29.3
CSS0043250 Camellia sinensis var. sinensis HOM05D005081 ORTHO05D005506 1.2e-12 77.8 246 30.1
Nitab4.5_0000053g0180 Nicotiana tabacum HOM05D005081 ORTHO05D005506 1.2e-12 77.8 237 30.0
Peaxi162Scf00889g00221 Petunia axillaris HOM05D005081 ORTHO05D005506 1.2e-12 77.8 244 29.5
Cpa.g.sc115.44 Carica papaya HOM05D005081 ORTHO05D005506 1.5e-12 77.4 224 29.9
Sopen00g006190 Solanum pennellii HOM05D005081 ORTHO05D005506 1.5e-12 77.4 240 29.2
Nitab4.5_0011475g0010 Nicotiana tabacum HOM05D005081 ORTHO05D005506 2.0e-12 77.0 240 31.2
SGA_v2.0_scaffold63G21842 Striga asiatica HOM05D005081 ORTHO05D005506 3.4e-12 76.3 241 29.9
ECA240G1118 Erigeron canadensis HOM05D005081 ORTHO05D005506 7.6e-12 75.1 240 30.0
FAN12G4058 Fragaria x ananassa HOM05D005081 ORTHO05D005506 1.0e-11 74.7 225 29.8
Atru.chr7.2685 Acer truncatum HOM05D005081 ORTHO05D005506 1.3e-11 74.3 200 33.5
Migut.L01903 Erythranthe guttata HOM05D005081 ORTHO05D005506 1.3e-11 74.3 238 26.9
AUR62033253 Chenopodium quinoa HOM05D005081 ORTHO05D005506 2.2e-11 73.6 239 30.1
FAN22G0520 Fragaria x ananassa HOM05D005081 ORTHO05D005506 2.2e-11 73.6 228 29.4
CiPaw.16G103000 Carya illinoinensis HOM05D005081 ORTHO05D005506 3.8e-11 72.8 228 32.9
Duzib170G0058 Durio zibethinus HOM05D005081 ORTHO05D005506 4.9e-11 72.4 210 31.4
FvH4_4g06450 Fragaria vesca HOM05D005081 ORTHO05D005506 4.9e-11 72.4 225 29.3
TWI32G0620 Tripterygium wilfordii HOM05D005081 ORTHO05D005506 4.9e-11 72.4 230 32.2
HanXRQChr10g0303491 Helianthus annuus HOM05D005081 ORTHO05D005506 6.5e-11 72.0 226 30.5
AUR62021338 Chenopodium quinoa HOM05D005081 ORTHO05D005506 2.5e-10 70.1 236 30.1
MSTRG.10457 Avicennia marina HOM05D005081 ORTHO05D005506 7.1e-10 68.6 232 27.6
CANSAT80G2033 Cannabis sativa HOM05D005081 ORTHO05D005506 7.1e-10 68.6 250 27.6
Cc00_g16170 Coffea canephora HOM05D005081 ORTHO05D005506 1.2e-09 67.8 246 26.8
Lalb_Chr05g0223691 Lupinus albus HOM05D005081 ORTHO05D005506 1.6e-09 67.4 218 31.2
Ciclev10012648m.g Citrus clementina HOM05D005081 ORTHO05D005506 2.1e-09 67.0 231 31.2
VMungo0251G2709 Vigna mungo HOM05D005081 ORTHO05D005506 2.1e-09 67.0 213 31.9
Dinv02618 Davidia involucrata HOM05D005081 ORTHO05D005506 6.0e-09 65.5 180 27.2
Duzib168G1013 Durio zibethinus HOM05D005081 ORTHO05D005506 7.9e-09 65.1 217 28.1
unitig_899.g15188 Utricularia gibba HOM05D005081 ORTHO05D005506 1.3e-08 64.3 231 28.6
Eucgr.C02188 Eucalyptus grandis HOM05D005081 ORTHO05D005506 1.8e-08 63.9 249 26.9
Hma1.2p1_0022F.1_g014780 Hydrangea macrophylla HOM05D005081 ORTHO05D005506 2.3e-08 63.5 209 29.7
Phvul.002G303500 Phaseolus vulgaris HOM05D005081 ORTHO05D005506 2.3e-08 63.5 222 29.7
MD13G1236100 Malus domestica HOM05D005081 ORTHO05D005506 3.9e-08 62.8 209 31.1
Prupe.1G067800 Prunus persica HOM05D005081 ORTHO05D005506 3.9e-08 62.8 204 30.9
THA.LOC104815319 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 3.9e-08 62.8 224 25.9
Glyma.08G028300 Glycine max HOM05D005081 ORTHO05D005506 5.1e-08 62.4 193 30.6
MELO3C017390.2 Cucumis melo HOM05D005081 ORTHO05D005506 6.7e-08 62.0 245 27.8
ECA234G2314 Erigeron canadensis HOM05D005081 ORTHO05D005506 8.7e-08 61.6 227 29.1
PGR044G2548 Punica granatum HOM05D005081 ORTHO05D005506 8.7e-08 61.6 230 29.1
CDE02G3184 Ceratophyllum demersum HOM05D005081 ORTHO05D005506 1.5e-07 60.8 191 30.9
Psat7g022000 Pisum sativum HOM05D005081 ORTHO05D005506 1.5e-07 60.8 135 34.8
Actinidia31880 Actinidia chinensis HOM05D005081 ORTHO05D005506 1.9e-07 60.5 157 29.3
Carub.0007s3114 Capsella rubella HOM05D005081 ORTHO05D005506 4.3e-07 59.3 229 27.9
CARHR217350 Cardamine hirsuta HOM05D005081 ORTHO05D005506 5.7e-07 58.9 222 28.4
Sed0028150 Sechium edule HOM05D005081 ORTHO05D005506 5.7e-07 58.9 225 28.0
Sed0020945 Sechium edule HOM05D005081 ORTHO05D005506 7.4e-07 58.5 232 28.0
Hund26317 Selenicereus undatus HOM05D005081 ORTHO05D005506 9.6e-07 58.2 237 28.7
ClCG06G014000 Citrullus lanatus HOM05D005081 ORTHO05D005506 1.6e-06 57.4 248 27.0
TPR.G25464 Trifolium pratense HOM05D005081 ORTHO05D005506 1.6e-06 57.4 204 27.9
CsaV3_1G032220 Cucumis sativus L. HOM05D005081 ORTHO05D005506 3.7e-06 56.2 246 28.0
Sc08g0004640 Simmondsia chinensis HOM05D005081 ORTHO05D005506 3.7e-06 56.2 242 25.6
Glyma.05G221800 Glycine max HOM05D005081 ORTHO05D005506 4.8e-06 55.8 197 27.4


User provided reference genes

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