Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 5.8e-115 417.5 207 100.0
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 4.2e-65 251.9 164 78.7
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 1.0e-63 247.3 141 83.0
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.4e-63 246.9 164 76.2
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 1.4e-63 246.9 164 76.2
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 2.3e-63 246.1 164 75.6
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 4.0e-63 245.4 164 73.8
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 4.0e-63 245.4 164 76.2
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 1.2e-62 243.8 164 75.0
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 1.2e-62 243.8 164 75.0
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 2.6e-62 242.7 164 75.6
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 7.5e-62 241.1 164 75.6
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 9.7e-62 240.7 141 81.6
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 1.8e-60 236.5 164 73.2
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 1.2e-59 233.8 164 70.7
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 2.0e-59 233.0 164 71.3
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.5e-59 231.9 164 70.7
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 7.7e-59 231.1 164 70.1
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 7.7e-59 231.1 164 71.3
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 7.7e-59 231.1 164 70.1
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 2.2e-58 229.6 164 68.9
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 2.2e-58 229.6 164 70.1
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 2.9e-58 229.2 164 71.3
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 3.8e-58 228.8 164 70.7
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 3.8e-58 228.8 164 68.9
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 3.8e-58 228.8 164 69.5
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 5.0e-58 228.4 164 69.5
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 5.0e-58 228.4 164 68.9
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 8.5e-58 227.6 164 69.5
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.5e-57 226.9 161 71.4
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 1.5e-57 226.9 164 70.1
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.9e-57 226.5 164 70.1
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.9e-57 226.5 164 70.1
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 2.5e-57 226.1 164 68.3
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 2.5e-57 226.1 164 70.1
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 2.5e-57 226.1 164 69.5
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 3.2e-57 225.7 164 68.3
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 4.2e-57 225.3 164 68.3
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 4.2e-57 225.3 164 67.7
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 4.2e-57 225.3 164 70.1
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 4.2e-57 225.3 164 68.9
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 4.2e-57 225.3 157 71.3
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 4.2e-57 225.3 164 69.5
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 4.2e-57 225.3 164 68.3
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 5.5e-57 224.9 164 69.5
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 7.2e-57 224.6 164 67.7
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 9.4e-57 224.2 157 71.3
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 9.4e-57 224.2 164 68.9
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 1.2e-56 223.8 164 68.9
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 1.2e-56 223.8 164 67.7
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 1.2e-56 223.8 164 67.1
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 1.6e-56 223.4 164 68.9
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 1.6e-56 223.4 164 67.7
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 1.6e-56 223.4 164 67.7
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.1e-56 223.0 164 67.7
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 2.1e-56 223.0 164 70.1
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 2.7e-56 222.6 164 68.9
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 2.7e-56 222.6 164 66.5
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 3.6e-56 222.2 164 68.3
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 4.7e-56 221.9 164 68.3
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 4.7e-56 221.9 164 67.1
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 4.7e-56 221.9 164 67.7
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 6.1e-56 221.5 164 67.7
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 6.1e-56 221.5 164 67.7
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 8.0e-56 221.1 164 65.9
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 8.0e-56 221.1 164 65.9
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 1.0e-55 220.7 164 66.5
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 2.3e-55 219.5 164 65.9
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 4.0e-55 218.8 164 65.2
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 5.2e-55 218.4 164 64.6
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 8.8e-55 217.6 164 66.5
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 2.0e-54 216.5 164 64.0
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 2.0e-54 216.5 164 63.4
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 4.4e-54 215.3 164 66.5
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 5.7e-54 214.9 164 64.6
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 5.7e-54 214.9 164 63.4
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 7.5e-54 214.5 164 63.4
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 9.8e-54 214.2 164 63.4
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 9.8e-54 214.2 164 64.0
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 1.7e-53 213.4 164 62.8
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 1.7e-53 213.4 164 64.0
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 2.2e-53 213.0 164 65.2
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.2e-53 213.0 164 63.4
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 2.8e-53 212.6 164 62.2
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 2.8e-53 212.6 164 62.2
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 3.7e-53 212.2 164 64.6
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 3.7e-53 212.2 164 63.4
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 4.8e-53 211.8 164 62.2
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 8.3e-53 211.1 164 62.2
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 8.3e-53 211.1 155 71.0
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 1.1e-52 210.7 164 62.2
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 1.1e-52 210.7 164 61.6
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 1.1e-52 210.7 164 62.2
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 1.1e-52 210.7 164 62.2
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 1.8e-52 209.9 164 62.2
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 1.8e-52 209.9 155 69.7
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 2.4e-52 209.5 195 56.9
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 3.1e-52 209.1 164 62.2
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 4.1e-52 208.8 164 61.6
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 4.1e-52 208.8 164 61.6
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 4.1e-52 208.8 156 67.3
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 9.1e-52 207.6 158 67.1
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 1.2e-51 207.2 166 62.0
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 3.5e-51 205.7 164 63.4
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 4.5e-51 205.3 155 67.1
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 1.7e-50 203.4 157 66.2
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 4.2e-49 198.7 170 59.4
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 4.2e-49 198.7 164 59.8
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 6.1e-48 194.9 164 57.9
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 1.8e-47 193.4 164 58.5
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 1.8e-47 193.4 164 61.0
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 9.8e-46 187.6 164 56.7
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 2.2e-45 186.4 156 59.0
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 6.3e-45 184.9 193 53.4
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 2.4e-44 183.0 153 62.1
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 4.1e-44 182.2 194 51.5
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.6e-43 180.3 107 79.4
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 8.6e-42 174.5 164 54.9
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 9.5e-41 171.0 155 55.5
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 2.3e-34 149.8 164 51.8
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 3.3e-33 146.0 162 52.5
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 4.0e-31 139.0 169 45.6
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 3.2e-28 129.4 173 42.2
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 2.1e-27 126.7 164 39.0
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 2.7e-27 126.3 171 39.2
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 9.5e-25 117.9 98 61.2
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 2.3e-23 113.2 70 74.3
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 6.8e-23 111.7 68 80.9
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 2.6e-22 109.8 66 78.8
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 2.6e-22 109.8 188 38.3
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 2.5e-17 93.2 53 77.4
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.4e-12 77.4 40 87.5
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.4e-12 77.4 40 87.5
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.2e-11 74.3 40 85.0


User provided reference genes

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