Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0063501 Lupinus albus HOM05D004800 ORTHO05D005842 5.3e-96 354.4 182 100.0
Psat5g033480 Pisum sativum HOM05D004800 ORTHO05D005842 2.7e-63 245.7 168 74.4
Lj1g0022737 Lotus japonicus HOM05D004800 ORTHO05D005842 2.9e-62 242.3 169 72.8
Ca_15781_v3 Cicer arietinum L. HOM05D004800 ORTHO05D005842 8.6e-62 240.7 172 73.8
Phvul.009G086600 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 8.6e-62 240.7 173 72.3
VMungo1309G1055 Vigna mungo HOM05D004800 ORTHO05D005842 5.6e-61 238.0 176 71.6
TPR.G1887 Trifolium pratense HOM05D004800 ORTHO05D005842 7.3e-61 237.7 168 72.0
Medtr3g105925 Medicago truncatula HOM05D004800 ORTHO05D005842 7.5e-58 227.6 170 71.2
Dinv13413 Davidia involucrata HOM05D004800 ORTHO05D005842 4.9e-57 224.9 173 70.5
TAR625G0162 Trochodendron aralioides HOM05D004800 ORTHO05D005842 4.9e-57 224.9 167 67.7
COL.COLO4_18955 Corchorus olitorius HOM05D004800 ORTHO05D005842 6.4e-57 224.6 165 69.1
Dinv08182 Davidia involucrata HOM05D004800 ORTHO05D005842 4.1e-56 221.9 166 70.5
Gorai.009G063300 Gossypium raimondii HOM05D004800 ORTHO05D005842 4.1e-56 221.9 166 69.9
TAR625G0311 Trochodendron aralioides HOM05D004800 ORTHO05D005842 5.4e-56 221.5 167 66.5
vmacro05151 Vaccinium macrocarpon HOM05D004800 ORTHO05D005842 5.4e-56 221.5 170 69.4
Gohir.D05G062200 Gossypium hirsutum HOM05D004800 ORTHO05D005842 9.2e-56 220.7 166 69.3
Thecc.09G015200 Theobroma cacao HOM05D004800 ORTHO05D005842 1.6e-55 219.9 164 69.5
GSVIVG01035974001 Vitis vinifera HOM05D004800 ORTHO05D005842 2.7e-55 219.2 169 66.9
CSS0020729 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 5.9e-55 218.0 170 70.0
CSS0021373 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 5.9e-55 218.0 170 70.0
CSS0041988 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 5.9e-55 218.0 170 70.0
Cfa013047 Carpinus fangiana HOM05D004800 ORTHO05D005842 7.8e-55 217.6 166 68.7
Hma1.2p1_0389F.1_g142470 Hydrangea macrophylla HOM05D004800 ORTHO05D005842 7.8e-55 217.6 165 67.9
Ciclev10009140m.g Citrus clementina HOM05D004800 ORTHO05D005842 1.0e-54 217.2 170 66.5
Cpa.g.sc148.17 Carica papaya HOM05D004800 ORTHO05D005842 1.3e-54 216.9 165 67.3
Gohir.A05G060000 Gossypium hirsutum HOM05D004800 ORTHO05D005842 3.0e-54 215.7 174 67.2
Haze_21408 Corylus avellana HOM05D004800 ORTHO05D005842 3.9e-54 215.3 166 68.1
Duzib168G1619 Durio zibethinus HOM05D004800 ORTHO05D005842 3.9e-54 215.3 165 67.9
Prupe.1G394400 Prunus persica HOM05D004800 ORTHO05D005842 6.6e-54 214.5 178 64.6
Rhsim07G0165700 Rhododendron simsii HOM05D004800 ORTHO05D005842 5.6e-53 211.5 170 66.5
RcHm_v2.0_Chr6g0299361 Rosa chinensis HOM05D004800 ORTHO05D005842 6.2e-52 208.0 170 62.9
FvH4_2g41170 Fragaria vesca HOM05D004800 ORTHO05D005842 8.0e-52 207.6 170 62.4
Manes.16G130200 Manihot esculenta HOM05D004800 ORTHO05D005842 1.4e-51 206.8 166 62.7
arahy.Tifrunner.gnm1.ann1.D8NHAG Arachis hypogaea HOM05D004800 ORTHO05D005842 1.8e-51 206.5 163 66.9
CiPaw.08G005800 Carya illinoinensis HOM05D004800 ORTHO05D005842 4.0e-51 205.3 166 64.5
Lsat_1_v5_gn_5_49760 Lactuca sativa HOM05D004800 ORTHO05D005842 5.2e-51 204.9 171 65.5
Sabra06G0206800 Salix brachista HOM05D004800 ORTHO05D005842 5.2e-51 204.9 166 66.3
FAN27G0477 Fragaria x ananassa HOM05D004800 ORTHO05D005842 6.8e-51 204.5 170 61.2
CANSAT25G3039 Cannabis sativa HOM05D004800 ORTHO05D005842 8.9e-51 204.1 168 63.1
FAN20G2958 Fragaria x ananassa HOM05D004800 ORTHO05D005842 8.9e-51 204.1 170 61.2
Manes.03G008100 Manihot esculenta HOM05D004800 ORTHO05D005842 1.2e-50 203.8 170 61.2
Potri.006G264700 Populus trichocarpa HOM05D004800 ORTHO05D005842 1.2e-50 203.8 166 65.7
Glyma.06G061100 Glycine max HOM05D004800 ORTHO05D005842 2.0e-50 203.0 175 64.6
DCAR_022862 Daucus carota HOM05D004800 ORTHO05D005842 3.4e-50 202.2 167 62.9
Sabra18G0021000 Salix brachista HOM05D004800 ORTHO05D005842 3.4e-50 202.2 171 64.3
PSO339G1021 Papaver somniferum HOM05D004800 ORTHO05D005842 4.4e-50 201.8 167 61.7
PSO384G2235 Papaver somniferum HOM05D004800 ORTHO05D005842 4.4e-50 201.8 167 61.7
THA.LOC104814986 Tarenaya hassleriana HOM05D004800 ORTHO05D005842 5.8e-50 201.4 166 62.7
HanXRQChr13g0411011 Helianthus annuus HOM05D004800 ORTHO05D005842 7.5e-50 201.1 174 62.6
Aqoxy7G03382 Aquilegia oxysepala HOM05D004800 ORTHO05D005842 1.3e-49 200.3 165 62.4
Lj7A735T34 Lonicera japonica HOM05D004800 ORTHO05D005842 1.3e-49 200.3 165 63.0
Sc09g0010680 Simmondsia chinensis HOM05D004800 ORTHO05D005842 1.7e-49 199.9 157 68.2
Sed0002840 Sechium edule HOM05D004800 ORTHO05D005842 2.9e-49 199.1 165 63.0
Hund02986 Selenicereus undatus HOM05D004800 ORTHO05D005842 4.9e-49 198.4 167 61.1
Eucgr.C02606 Eucalyptus grandis HOM05D004800 ORTHO05D005842 8.3e-49 197.6 169 62.7
TWI34G0615 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 1.1e-48 197.2 158 65.2
Eucgr.L02918 Eucalyptus grandis HOM05D004800 ORTHO05D005842 1.4e-48 196.8 169 62.1
EL10Ac2g02494 Beta vulgaris HOM05D004800 ORTHO05D005842 2.4e-48 196.1 167 62.9
AUR62032420 Chenopodium quinoa HOM05D004800 ORTHO05D005842 5.4e-48 194.9 168 63.7
AUR62024801 Chenopodium quinoa HOM05D004800 ORTHO05D005842 2.0e-47 193.0 168 63.1
TWI32G1317 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 3.5e-47 192.2 157 63.1
Cc08_g07200 Coffea canephora HOM05D004800 ORTHO05D005842 7.8e-47 191.0 163 63.2
A06p35840 Brassica napus HOM05D004800 ORTHO05D005842 1.0e-46 190.7 168 57.1
BraA06t26509Z Brassica rapa HOM05D004800 ORTHO05D005842 1.0e-46 190.7 168 57.1
MSTRG.25830 Avicennia marina HOM05D004800 ORTHO05D005842 1.7e-46 189.9 164 59.1
Sp2g22450 Schrenkiella parvula HOM05D004800 ORTHO05D005842 1.7e-46 189.9 165 57.0
Oeu001621.3 Olea europaea HOM05D004800 ORTHO05D005842 3.9e-46 188.7 164 57.9
BcaNung02298 Brassica carinata HOM05D004800 ORTHO05D005842 6.6e-46 188.0 171 56.7
CANSAT35G0701 Cannabis sativa HOM05D004800 ORTHO05D005842 1.1e-45 187.2 169 59.2
Oeu009650.1 Olea europaea HOM05D004800 ORTHO05D005842 1.5e-45 186.8 164 57.9
Actinidia14132 Actinidia chinensis HOM05D004800 ORTHO05D005842 1.9e-45 186.4 158 62.7
BcaNung03198 Brassica carinata HOM05D004800 ORTHO05D005842 4.3e-45 185.3 165 55.8
BcaNung06718 Brassica carinata HOM05D004800 ORTHO05D005842 4.3e-45 185.3 165 55.8
QL02p018802 Quercus lobata HOM05D004800 ORTHO05D005842 5.6e-45 184.9 169 59.8
PGR044G1902 Punica granatum HOM05D004800 ORTHO05D005842 7.3e-45 184.5 163 60.1
Migut.A00358 Erythranthe guttata HOM05D004800 ORTHO05D005842 2.8e-44 182.6 169 58.6
Atru.chr7.2559 Acer truncatum HOM05D004800 ORTHO05D005842 4.7e-44 181.8 175 57.7
SalBow4G3208 Salvia bowleyana HOM05D004800 ORTHO05D005842 4.7e-44 181.8 167 58.7
SGA_v2.0_scaffold147G36341 Striga asiatica HOM05D004800 ORTHO05D005842 4.7e-44 181.8 164 55.5
AT5G25080 Arabidopsis thaliana HOM05D004800 ORTHO05D005842 8.1e-44 181.0 165 55.2
arahy.Tifrunner.gnm1.ann1.1BAV2G Arachis hypogaea HOM05D004800 ORTHO05D005842 1.4e-43 180.3 163 60.7
ATR0580G220 Amborella trichopoda HOM05D004800 ORTHO05D005842 3.1e-43 179.1 164 57.3
CDE02G3876 Ceratophyllum demersum HOM05D004800 ORTHO05D005842 3.1e-43 179.1 165 60.0
BcaC04g23570 Brassica carinata HOM05D004800 ORTHO05D005842 4.0e-43 178.7 168 56.5
C09p07000 Brassica napus HOM05D004800 ORTHO05D005842 4.0e-43 178.7 168 56.5
Carub.0006s2291 Capsella rubella HOM05D004800 ORTHO05D005842 6.8e-43 177.9 165 55.8
Nitab4.5_0010613g0010 Nicotiana tabacum HOM05D004800 ORTHO05D005842 8.9e-43 177.6 183 53.6
CAN.G333.3 Capsicum annuum HOM05D004800 ORTHO05D005842 2.0e-42 176.4 169 56.8
AL6G36710 Arabidopsis lyrata HOM05D004800 ORTHO05D005842 3.4e-42 175.6 165 55.2
BolC7t44804H Brassica oleracea HOM05D004800 ORTHO05D005842 5.8e-42 174.9 194 50.0
C07p42740 Brassica napus HOM05D004800 ORTHO05D005842 7.5e-42 174.5 194 49.5
Solyc07g008750.4 Solanum lycopersicum HOM05D004800 ORTHO05D005842 7.5e-42 174.5 164 57.3
BraA09t36276Z Brassica rapa HOM05D004800 ORTHO05D005842 9.8e-42 174.1 168 54.8
ClCG05G016220 Citrullus lanatus HOM05D004800 ORTHO05D005842 1.7e-41 173.3 169 56.8
PGSC0003DMG401028727 Solanum tuberosum HOM05D004800 ORTHO05D005842 1.7e-41 173.3 164 56.7
A09p06310 Brassica napus HOM05D004800 ORTHO05D005842 3.7e-41 172.2 168 54.2
Sopen07g004690 Solanum pennellii HOM05D004800 ORTHO05D005842 4.9e-41 171.8 164 56.7
CsaV3_4G036490 Cucumis sativus L. HOM05D004800 ORTHO05D005842 6.4e-41 171.4 170 56.5
MELO3C016954.2 Cucumis melo HOM05D004800 ORTHO05D005842 8.3e-41 171.0 170 55.3
Actinidia23108 Actinidia chinensis HOM05D004800 ORTHO05D005842 1.9e-40 169.9 166 57.8
BolC9t53616H Brassica oleracea HOM05D004800 ORTHO05D005842 4.1e-40 168.7 167 54.5
HPP92_017174 Vanilla planifolia HOM05D004800 ORTHO05D005842 4.1e-40 168.7 163 52.1
MD08G1055900 Malus domestica HOM05D004800 ORTHO05D005842 2.7e-39 166.0 164 54.3
Peaxi162Scf00006g00249 Petunia axillaris HOM05D004800 ORTHO05D005842 7.8e-39 164.5 165 53.9
Thhalv10004902m.g Eutrema salsugineum HOM05D004800 ORTHO05D005842 1.3e-38 163.7 165 51.5
CARHR188420 Cardamine hirsuta HOM05D004800 ORTHO05D005842 8.6e-38 161.0 166 50.6
Aa31LG11G4300 Aethionema arabicum HOM05D004800 ORTHO05D005842 3.3e-37 159.1 168 48.8
unitig_749.g13819 Utricularia gibba HOM05D004800 ORTHO05D005842 6.2e-36 154.8 164 50.6
ECA240G1139 Erigeron canadensis HOM05D004800 ORTHO05D005842 1.4e-35 153.7 120 65.8
Os08g0270200 Oryza sativa ssp. japonica HOM05D004800 ORTHO05D005842 5.2e-35 151.8 166 48.2
Zm00001eb177850 Zea mays HOM05D004800 ORTHO05D005842 1.3e-33 147.1 165 49.1
Nn2g12411 Nelumbo nucifera HOM05D004800 ORTHO05D005842 1.1e-32 144.1 95 71.6
Potri.018G018100 Populus trichocarpa HOM05D004800 ORTHO05D005842 2.4e-32 142.9 123 65.9
Peaxi162Scf01038g00137 Petunia axillaris HOM05D004800 ORTHO05D005842 5.4e-32 141.7 119 64.7
SHI21074 Sapria himalayana HOM05D004800 ORTHO05D005842 7.1e-32 141.4 180 46.7
arahy.Tifrunner.gnm1.ann1.D9UBCD Arachis hypogaea HOM05D004800 ORTHO05D005842 4.7e-28 128.6 172 44.2
arahy.Tifrunner.gnm1.ann1.CUZL6Q Arachis hypogaea HOM05D004800 ORTHO05D005842 6.2e-28 128.3 172 44.2
arahy.Tifrunner.gnm1.ann1.N4WP0Z Arachis hypogaea HOM05D004800 ORTHO05D005842 6.2e-28 128.3 172 44.2
MBI14_g09103_MAGBIO Magnolia biondii HOM05D004800 ORTHO05D005842 1.8e-27 126.7 168 47.0
arahy.Tifrunner.gnm1.ann1.YE5PM3 Arachis hypogaea HOM05D004800 ORTHO05D005842 5.2e-27 125.2 172 43.0
Lj5g0013304 Lotus japonicus HOM05D004800 ORTHO05D005842 5.8e-26 121.7 165 45.5
BcaB04g19808 Brassica carinata HOM05D004800 ORTHO05D005842 7.6e-26 121.3 165 47.9
Phvul.001G041300 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 1.7e-25 120.2 167 44.3
Nitab4.5_0000617g0080 Nicotiana tabacum HOM05D004800 ORTHO05D005842 3.8e-25 119.0 83 66.3
Glyma.14G101700 Glycine max HOM05D004800 ORTHO05D005842 4.3e-21 105.5 165 41.2
TPR.G38911 Trifolium pratense HOM05D004800 ORTHO05D005842 5.6e-21 105.1 164 42.7
VMungo0647G1387 Vigna mungo HOM05D004800 ORTHO05D005842 4.8e-20 102.1 172 42.4
Mapoly0130s0032 Marchantia polymorpha HOM05D004800 ORTHO05D005842 6.2e-20 101.7 149 35.6
Pp3c2_14120 Physcomitrium patens HOM05D004800 ORTHO05D005842 2.4e-19 99.8 138 42.0
Psat6g026000 Pisum sativum HOM05D004800 ORTHO05D005842 1.5e-18 97.1 150 40.7
unitig_26.g9784 Utricularia gibba HOM05D004800 ORTHO05D005842 9.9e-18 94.4 162 39.5
Medtr1g014130 Medicago truncatula HOM05D004800 ORTHO05D005842 9.3e-16 87.8 148 41.2
AagrBONN_evm.TU.Sc2ySwM_368.3173 Anthoceros agrestis HOM05D004800 ORTHO05D005842 2.7e-15 86.3 144 37.5
SMO140G0030 Selaginella moellendorffii HOM05D004800 ORTHO05D005842 3.9e-14 82.4 152 34.9
Zm00001eb353150 Zea mays HOM05D004800 ORTHO05D005842 7.4e-13 78.2 139 39.6
TPR.G28957 Trifolium pratense HOM05D000201 ORTHO05D000421 2.8e-12 76.3 47 72.3
Lalb_Chr24g0401961 Lupinus albus HOM05D004800 ORTHO05D005842 3.1e-11 72.8 55 60.0
TPR.G31499 Trifolium pratense HOM05D000201 ORTHO05D016113 4.9e-09 65.5 47 66.0
Sopen01g020190 Solanum pennellii HOM05D004800 ORTHO05D005842 1.8e-06 57.0 69 52.2


User provided reference genes

Program Settings