Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 1.6e-192 676.0 355 100.0
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 3.1e-108 396.0 371 63.9
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 4.2e-105 385.6 383 60.1
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 3.7e-101 372.5 356 64.3
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 5.3e-100 368.6 371 59.0
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 5.3e-100 368.6 371 60.6
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 1.4e-92 344.0 371 59.8
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 1.2e-91 340.9 355 58.6
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 5.9e-91 338.6 372 57.3
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 1.7e-82 310.5 360 57.2
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 2.9e-82 309.7 361 52.4
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 4.2e-81 305.8 377 53.3
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 8.0e-80 301.6 380 54.7
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 3.0e-79 299.7 376 52.1
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 5.2e-79 298.9 345 56.8
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 5.2e-79 298.9 344 57.3
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 8.8e-79 298.1 383 53.0
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 8.8e-79 298.1 358 55.9
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 4.5e-75 285.8 378 51.1
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 1.0e-74 284.6 382 53.4
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 1.3e-74 284.3 379 52.2
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 1.7e-74 283.9 345 54.2
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 2.5e-73 280.0 358 54.7
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 4.2e-73 279.3 378 52.9
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 9.4e-73 278.1 357 52.7
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 1.5e-70 270.8 379 51.2
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 3.4e-70 269.6 351 51.9
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 1.3e-69 267.7 373 52.0
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 2.8e-69 266.5 380 50.8
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 1.1e-68 264.6 332 55.1
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 1.1e-68 264.6 363 48.2
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 2.0e-67 260.4 345 51.0
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 7.7e-67 258.5 329 56.2
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 1.0e-66 258.1 386 49.7
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 2.9e-66 256.5 384 49.2
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 8.6e-66 255.0 378 47.6
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 8.6e-66 255.0 386 47.9
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 8.6e-66 255.0 384 49.0
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 9.5e-65 251.5 384 48.4
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 1.4e-63 247.7 374 51.1
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 2.8e-61 240.0 361 46.0
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.4e-60 237.7 362 46.7
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 3.2e-60 236.5 346 48.8
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 5.4e-60 235.7 347 50.7
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 7.0e-60 235.3 363 45.7
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 9.2e-60 235.0 396 45.7
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 9.2e-60 235.0 376 46.5
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 5.9e-59 232.3 322 54.3
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 5.0e-58 229.2 328 48.8
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 5.6e-57 225.7 346 46.2
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 3.1e-55 219.9 371 44.5
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 5.2e-55 219.2 352 45.2
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 1.7e-53 214.2 337 42.4
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 4.1e-52 209.5 362 39.0
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 7.0e-52 208.8 300 47.7
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 1.2e-51 208.0 375 45.9
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 1.6e-51 207.6 357 41.7
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 4.6e-51 206.1 357 43.1
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 1.0e-50 204.9 334 42.5
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 2.5e-49 200.3 378 41.8
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 1.6e-48 197.6 347 44.1
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 4.7e-48 196.1 372 40.6
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 8.1e-48 195.3 378 42.9
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 3.1e-47 193.4 389 41.4
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 8.9e-47 191.8 317 43.5
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 2.0e-46 190.7 323 44.3
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 3.7e-45 186.4 379 39.1
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 8.3e-45 185.3 314 43.0
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 2.4e-44 183.7 364 40.7
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 1.2e-43 181.4 302 42.4
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 2.3e-42 177.2 342 38.9
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 5.1e-42 176.0 344 39.2
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 1.1e-41 174.9 377 37.1
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 3.3e-41 173.3 343 40.2
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.3e-37 161.4 171 56.1
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 2.2e-37 160.6 228 43.4
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 2.9e-37 160.2 378 36.2
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 2.4e-36 157.1 339 40.7
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 5.4e-36 156.0 345 40.9
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 7.1e-36 155.6 367 33.5
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 1.3e-34 151.4 293 38.9
Lalb_Chr08g0244621 Lupinus albus HOM05D005213 ORTHO05D006229 1.3e-34 151.4 103 69.9
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 3.9e-34 149.8 341 35.8
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 3.9e-34 149.8 416 30.3
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 4.3e-33 146.4 336 39.9
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 9.6e-33 145.2 341 34.9
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 9.6e-33 145.2 322 35.4
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 1.6e-32 144.4 353 34.0
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 3.6e-32 143.3 295 34.6
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 3.1e-31 140.2 374 38.8
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 4.0e-31 139.8 359 35.4
arahy.Tifrunner.gnm1.ann1.3D63PE Arachis hypogaea HOM05D005213 ORTHO05D006229 5.2e-31 139.4 323 35.9
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 6.8e-31 139.0 330 35.2
arahy.Tifrunner.gnm1.ann1.698XEU Arachis hypogaea HOM05D005213 ORTHO05D006229 3.4e-30 136.7 319 40.1
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 2.9e-29 133.7 361 31.9
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 5.4e-28 129.4 334 31.4
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 3.5e-27 126.7 333 34.8
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 1.7e-26 124.4 317 35.3
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 1.1e-25 121.7 114 50.0
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 5.6e-25 119.4 340 30.6
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 9.6e-25 118.6 325 32.9
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 2.1e-24 117.5 328 32.9
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 1.4e-23 114.8 346 32.7
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 4.4e-22 109.8 321 32.7
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 2.2e-21 107.5 172 40.7
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.4e-20 104.0 199 38.7
CsaV3_4G036220 Cucumis sativus L. HOM05D005213 ORTHO05D006229 3.2e-20 103.6 351 33.0
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 4.2e-20 103.2 316 31.0
MELO3C016931.2 Cucumis melo HOM05D005213 ORTHO05D006229 7.9e-19 99.0 351 31.9
ClCG05G015950 Citrullus lanatus HOM05D005213 ORTHO05D006229 3.0e-18 97.1 315 34.9
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 3.3e-17 93.6 366 30.1
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 3.3e-17 93.6 366 30.1
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 4.3e-17 93.2 260 33.5
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 1.3e-16 91.7 357 31.1
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 1.3e-16 91.7 357 31.1
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 1.8e-15 87.8 352 29.3
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 3.1e-15 87.0 345 28.4
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 4.0e-15 86.7 357 29.7
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 9.0e-15 85.5 359 27.0
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 9.0e-15 85.5 352 29.0
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 9.0e-15 85.5 359 27.0
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 1.2e-14 85.1 199 40.2
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 1.2e-14 85.1 359 27.0
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 5.8e-14 82.8 336 29.2
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 7.6e-14 82.4 351 28.2
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 1.7e-13 81.3 160 38.8
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 1.7e-13 81.3 358 27.4
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 1.7e-13 81.3 338 30.2
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 1.7e-13 81.3 338 30.2
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 1.7e-13 81.3 49 85.7
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 2.9e-13 80.5 348 31.0
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 3.8e-13 80.1 64 70.3
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 3.8e-13 80.1 323 26.0
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 1.1e-12 78.6 338 29.9
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 1.1e-12 78.6 61 73.8
ECA236G4272 Erigeron canadensis HOM05D005213 ORTHO05D006229 2.4e-12 77.4 318 27.7
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 9.3e-12 75.5 82 59.8
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 6.0e-11 72.8 352 27.6
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 7.9e-11 72.4 337 28.5
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 1.0e-10 72.0 208 34.1
Zm00001eb109280 Zea mays HOM05D005213 ORTHO05D006229 1.0e-10 72.0 318 28.3
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 3.9e-10 70.1 346 28.3
SGA_v2.0_scaffold4G02181 Striga asiatica HOM05D005213 ORTHO05D006229 8.7e-10 68.9 347 27.4
SEGI_40729 Sequoiadendron giganteum HOM05D005213 ORTHO05D006229 9.0e-07 58.9 382 27.0
HPP92_004172 Vanilla planifolia HOM05D001722 ORTHO05D001910 7.6e-06 55.8 306 23.9


User provided reference genes

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