Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 2.7e-118 428.7 218 100.0
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 2.4e-74 282.7 217 70.0
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 2.0e-73 279.6 219 66.7
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 6.4e-72 274.6 218 67.9
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 8.4e-72 274.2 219 68.0
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 1.1e-71 273.9 217 68.7
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 1.4e-71 273.5 217 67.7
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 7.1e-71 271.2 219 65.8
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 3.0e-69 265.8 218 65.6
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 8.1e-67 257.7 215 63.7
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 1.4e-66 256.9 216 64.4
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 1.8e-66 256.5 216 61.6
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 1.5e-65 253.4 221 62.4
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 4.5e-65 251.9 218 60.6
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 1.7e-64 250.0 219 62.6
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 2.2e-64 249.6 218 61.0
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 6.4e-64 248.1 216 63.4
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 3.2e-63 245.7 217 59.4
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 5.4e-63 245.0 216 63.0
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 9.3e-63 244.2 219 61.2
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 2.1e-62 243.0 215 61.4
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 2.7e-62 242.7 223 61.9
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 4.6e-62 241.9 223 60.5
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 1.8e-61 240.0 220 62.7
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 5.1e-61 238.4 225 61.8
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 6.7e-61 238.0 218 59.6
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 1.1e-60 237.3 217 59.9
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 1.5e-60 236.9 222 56.3
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 1.5e-60 236.9 218 60.6
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 2.5e-60 236.1 217 59.0
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 3.3e-60 235.7 217 59.0
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 9.6e-60 234.2 220 59.5
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 2.8e-59 232.6 203 63.5
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 6.2e-59 231.5 218 58.3
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 8.1e-59 231.1 221 60.2
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 1.8e-58 229.9 217 56.7
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 2.0e-57 226.5 225 60.9
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 2.6e-57 226.1 217 55.8
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 4.5e-57 225.3 216 58.8
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 1.3e-56 223.8 227 55.1
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 2.9e-56 222.6 209 59.3
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 1.1e-55 220.7 175 68.0
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 4.2e-55 218.8 237 52.7
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 5.5e-55 218.4 187 58.8
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 5.5e-55 218.4 208 56.7
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 2.7e-54 216.1 195 60.0
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 1.0e-53 214.2 171 62.6
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 1.0e-53 214.2 215 55.8
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 1.8e-53 213.4 220 53.6
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 2.3e-53 213.0 204 53.4
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 3.0e-53 212.6 218 52.3
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 3.0e-53 212.6 218 52.3
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 3.0e-53 212.6 218 52.3
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 6.7e-53 211.5 204 53.4
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.9e-52 209.9 201 57.2
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 3.3e-52 209.1 187 63.1
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 5.6e-52 208.4 220 52.3
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 1.3e-51 207.2 205 53.7
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 2.1e-51 206.5 217 53.9
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 2.1e-51 206.5 191 61.3
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 4.8e-51 205.3 173 60.1
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 6.2e-51 204.9 220 50.5
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 8.1e-51 204.5 232 51.3
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 8.1e-51 204.5 146 69.2
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 2.4e-50 203.0 218 50.5
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 2.4e-50 203.0 218 49.5
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 9.0e-50 201.1 169 59.2
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 1.5e-49 200.3 220 50.9
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 2.6e-49 199.5 216 51.4
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 2.9e-48 196.1 169 59.2
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 2.9e-48 196.1 221 51.1
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 1.9e-47 193.4 224 48.7
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 2.5e-47 193.0 211 52.1
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 4.2e-47 192.2 211 51.7
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 5.5e-47 191.8 195 53.3
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 5.5e-47 191.8 186 55.9
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 7.1e-47 191.4 251 43.8
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 1.6e-46 190.3 148 62.2
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 4.6e-46 188.7 158 62.7
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 7.9e-46 188.0 128 68.8
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 2.3e-45 186.4 191 56.5
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 3.9e-45 185.7 191 55.5
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 1.6e-43 180.3 148 60.1
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 2.1e-43 179.9 148 58.8
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 8.2e-43 177.9 144 65.3
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 2.4e-42 176.4 129 67.4
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 2.4e-42 176.4 155 55.5
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 2.0e-41 173.3 232 47.0
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 2.9e-40 169.5 154 55.8
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 3.6e-38 162.5 232 44.4
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.0e-37 161.0 232 45.7
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.6e-35 153.7 201 47.3
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 1.4e-23 114.0 213 35.2
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 2.7e-22 109.8 146 45.2
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 2.3e-21 106.7 99 57.6
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 4.1e-18 95.9 174 35.6
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 4.5e-17 92.4 170 36.5
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 4.7e-14 82.4 147 33.3
Haze_18114 Corylus avellana HOM05D007388 ORTHO05D009421 1.0e-13 81.3 87 57.5
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 2.2e-11 73.6 67 52.2
FAN15G1408 Fragaria x ananassa HOM05D007388 ORTHO05D009421 2.0e-09 67.0 93 51.6
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 2.0e-09 67.0 101 37.6


User provided reference genes

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