Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0062981 Lupinus albus HOM05D007433 ORTHO05D009199 2.1e-61 238.8 120 100.0
Lalb_Chr08g0245211 Lupinus albus HOM05D007433 ORTHO05D009199 6.1e-40 167.5 121 75.2
Lj1g0004253 Lotus japonicus HOM05D007433 ORTHO05D009199 4.2e-33 144.8 120 70.0
Phvul.009G073600 Phaseolus vulgaris HOM05D007433 ORTHO05D009199 3.6e-32 141.7 122 67.2
TPR.G33670 Trifolium pratense HOM05D007433 ORTHO05D009199 1.8e-31 139.4 118 69.5
Glyma.06G048300 Glycine max HOM05D007433 ORTHO05D009199 1.7e-29 132.9 125 65.6
Psat5g037160 Pisum sativum HOM05D007433 ORTHO05D009199 2.2e-29 132.5 120 63.3
VMungo1309G0469 Vigna mungo HOM05D007433 ORTHO05D009199 2.2e-29 132.5 121 63.6
Potri.014G013600 Populus trichocarpa HOM05D007433 ORTHO05D009199 8.2e-29 130.6 121 66.1
Medtr3g103330 Medicago truncatula HOM05D007433 ORTHO05D009199 1.4e-28 129.8 120 66.7
Hma1.2p1_1170F.1_g263410 Hydrangea macrophylla HOM05D007433 ORTHO05D009199 3.1e-28 128.6 111 65.8
Thecc.08G085300 Theobroma cacao HOM05D007433 ORTHO05D009199 1.2e-27 126.7 111 64.9
GSVIVG01009308001 Vitis vinifera HOM05D007433 ORTHO05D009199 2.6e-27 125.6 120 60.8
vmacro04593 Vaccinium macrocarpon HOM05D007433 ORTHO05D009199 4.5e-27 124.8 115 63.5
Dinv44935 Davidia involucrata HOM05D007433 ORTHO05D009199 1.0e-26 123.6 111 66.7
Glyma.04G047400 Glycine max HOM05D007433 ORTHO05D009199 1.0e-26 123.6 113 64.6
Haze_06413 Corylus avellana HOM05D007433 ORTHO05D009199 2.9e-26 122.1 117 61.5
QL12p038428 Quercus lobata HOM05D007433 ORTHO05D009199 2.9e-26 122.1 116 59.5
Cfa013749 Carpinus fangiana HOM05D007433 ORTHO05D009199 3.8e-26 121.7 111 64.0
Actinidia29630 Actinidia chinensis HOM05D001492 ORTHO05D001400 8.5e-26 120.6 114 60.5
CiPaw.07G172700 Carya illinoinensis HOM05D007433 ORTHO05D009199 1.5e-25 119.8 121 58.7
Manes.05G183000 Manihot esculenta HOM05D007433 ORTHO05D009199 1.5e-25 119.8 119 60.5
Rhsim07G0217700 Rhododendron simsii HOM05D007433 ORTHO05D009199 5.5e-25 117.9 122 63.1
Actinidia19585 Actinidia chinensis HOM05D002375 ORTHO05D002457 1.2e-24 116.7 111 57.7
TAR376G0199 Trochodendron aralioides HOM05D007433 ORTHO05D009199 4.7e-24 114.8 112 61.6
Potri.002G116200 Populus trichocarpa HOM05D007433 ORTHO05D009199 8.0e-24 114.0 111 62.2
Aqoxy6G02471 Aquilegia oxysepala HOM05D007433 ORTHO05D009199 1.0e-23 113.6 116 60.3
CiPaw.08G051700 Carya illinoinensis HOM05D007433 ORTHO05D009199 1.0e-23 113.6 122 54.1
COL.COLO4_28471 Corchorus olitorius HOM05D007433 ORTHO05D009199 3.0e-23 112.1 113 60.2
TAR628G1336 Trochodendron aralioides HOM05D007433 ORTHO05D009199 5.2e-23 111.3 116 58.6
Nn5g30654 Nelumbo nucifera HOM05D007433 ORTHO05D009199 8.8e-23 110.5 110 60.9
CANSAT25G0221 Cannabis sativa HOM05D007433 ORTHO05D009199 1.2e-22 110.2 114 58.8
Dinv39208 Davidia involucrata HOM05D007433 ORTHO05D009199 1.2e-22 110.2 100 60.0
Atru.chr13.862 Acer truncatum HOM05D007433 ORTHO05D009199 1.5e-22 109.8 121 55.4
Prupe.1G419900 Prunus persica HOM05D007433 ORTHO05D009199 1.5e-22 109.8 111 59.5
Sed0005155 Sechium edule HOM05D007433 ORTHO05D009199 2.0e-22 109.4 117 58.1
Gohir.A02G080400 Gossypium hirsutum HOM05D007433 ORTHO05D009199 4.4e-22 108.2 107 58.9
Gohir.D02G088300 Gossypium hirsutum HOM05D007433 ORTHO05D009199 4.4e-22 108.2 107 58.9
Gorai.005G098900 Gossypium raimondii HOM05D007433 ORTHO05D009199 4.4e-22 108.2 107 58.9
Sabra02G0091500 Salix brachista HOM05D007433 ORTHO05D009199 7.5e-22 107.5 97 66.0
ClCG05G026590 Citrullus lanatus HOM05D007433 ORTHO05D009199 9.7e-22 107.1 110 58.2
Gohir.D06G022200 Gossypium hirsutum HOM05D007433 ORTHO05D009199 9.7e-22 107.1 109 54.1
Manes.18G048800 Manihot esculenta HOM05D007433 ORTHO05D009199 9.7e-22 107.1 119 52.9
CAN.G1239.9 Capsicum annuum HOM05D007433 ORTHO05D009199 1.7e-21 106.3 103 59.2
MELO3C016834.2 Cucumis melo HOM05D007433 ORTHO05D009199 1.7e-21 106.3 110 58.2
Gohir.A06G025100 Gossypium hirsutum HOM05D007433 ORTHO05D009199 3.7e-21 105.1 108 52.8
MD15G1066100 Malus domestica HOM05D007433 ORTHO05D009199 4.8e-21 104.8 114 59.6
Gorai.010G026800 Gossypium raimondii HOM05D007433 ORTHO05D009199 6.3e-21 104.4 109 51.4
Ca_15891_v3 Cicer arietinum L. HOM05D007433 ORTHO05D009199 8.3e-21 104.0 119 57.1
Peaxi162Scf00340g00061 Petunia axillaris HOM05D007433 ORTHO05D009199 5.3e-20 101.3 112 59.8
PGSC0003DMG400004914 Solanum tuberosum HOM05D007433 ORTHO05D009199 9.1e-20 100.5 101 58.4
Gohir.A05G211600 Gossypium hirsutum HOM05D007433 ORTHO05D009199 2.7e-19 99.0 97 56.7
Sopen04g031210 Solanum pennellii HOM05D007433 ORTHO05D009199 2.7e-19 99.0 115 56.5
Gorai.009G221600 Gossypium raimondii HOM05D007433 ORTHO05D009199 3.5e-19 98.6 97 56.7
FAN15G2820 Fragaria x ananassa HOM05D007433 ORTHO05D009199 4.5e-19 98.2 113 54.0
Solyc04g077570.1 Solanum lycopersicum HOM05D007433 ORTHO05D009199 4.5e-19 98.2 101 57.4
FvH4_2g32740 Fragaria vesca HOM05D007433 ORTHO05D009199 7.7e-19 97.4 114 54.4
FAN24G3110 Fragaria x ananassa HOM05D007433 ORTHO05D009199 7.7e-19 97.4 114 54.4
Gohir.D05G214900 Gossypium hirsutum HOM05D007433 ORTHO05D009199 7.7e-19 97.4 97 55.7
Eucgr.F00094 Eucalyptus grandis HOM05D007433 ORTHO05D009199 1.0e-18 97.1 101 54.5
Nn6g34518 Nelumbo nucifera HOM05D007433 ORTHO05D009199 1.0e-18 97.1 132 49.2
Cpa.g.sc142.56 Carica papaya HOM05D007433 ORTHO05D009199 1.7e-18 96.3 114 53.5
Lsat_1_v5_gn_1_480 Lactuca sativa HOM05D007433 ORTHO05D009199 1.7e-18 96.3 112 52.7
Phvul.001G029300 Phaseolus vulgaris HOM05D007433 ORTHO05D009199 2.2e-18 95.9 103 56.3
FAN27G2289 Fragaria x ananassa HOM05D007433 ORTHO05D009199 5.0e-18 94.7 113 52.2
Cc10_g07560 Coffea canephora HOM05D007433 ORTHO05D009199 6.5e-18 94.4 115 48.7
VMungo0647G2383 Vigna mungo HOM05D007433 ORTHO05D009199 6.5e-18 94.4 113 53.1
FAN20G2053 Fragaria x ananassa HOM05D007433 ORTHO05D009199 8.5e-18 94.0 112 51.8
RcHm_v2.0_Chr6g0309931 Rosa chinensis HOM05D007433 ORTHO05D009199 8.5e-18 94.0 113 51.3
TAR381G0154 Trochodendron aralioides HOM05D007433 ORTHO05D009199 1.1e-17 93.6 119 50.4
Glyma.17G233300 Glycine max HOM05D007433 ORTHO05D009199 2.5e-17 92.4 114 55.3
ECA247G0789 Erigeron canadensis HOM05D007433 ORTHO05D009199 9.4e-17 90.5 114 51.8
MBI16_g32085_MAGBIO Magnolia biondii HOM05D007433 ORTHO05D009199 1.2e-16 90.1 112 54.5
Nitab4.5_0013161g0010 Nicotiana tabacum HOM05D007433 ORTHO05D009199 1.6e-16 89.7 109 54.1
Oeu014281.1 Olea europaea HOM05D007433 ORTHO05D009199 3.6e-16 88.6 103 51.5
Sc02g0008080 Simmondsia chinensis HOM05D007433 ORTHO05D009199 6.1e-16 87.8 109 49.5
HanXRQChr10g0295351 Helianthus annuus HOM05D007433 ORTHO05D009199 6.8e-15 84.3 103 54.4
AUR62035005 Chenopodium quinoa HOM05D007433 ORTHO05D009199 2.6e-14 82.4 103 47.6
CsaV3_4G035230 Cucumis sativus L. HOM05D007433 ORTHO05D009199 2.6e-14 82.4 69 60.9
Migut.C00395 Erythranthe guttata HOM05D007433 ORTHO05D009199 3.4e-14 82.0 78 57.7
Phvul.011G135200 Phaseolus vulgaris HOM05D007433 ORTHO05D009199 3.4e-14 82.0 85 54.1
EL10Ac1g02355 Beta vulgaris HOM05D007433 ORTHO05D009199 1.3e-13 80.1 115 42.6
Ciclev10002882m.g Citrus clementina HOM05D007433 ORTHO05D009199 1.7e-13 79.7 114 46.5
SalBow7G1382 Salvia bowleyana HOM05D007433 ORTHO05D009199 1.8e-12 76.3 112 47.3
DCAR_008860 Daucus carota HOM05D007433 ORTHO05D009199 1.3e-10 70.1 74 55.4
Atru.chr13.863 Acer truncatum HOM05D007433 ORTHO05D009199 2.8e-08 62.4 83 47.0
Manes.13G109500 Manihot esculenta HOM05D007433 ORTHO05D009199 4.7e-08 61.6 89 41.6
Hma1.2p1_3243F.1_g334320 Hydrangea macrophylla HOM05D007433 ORTHO05D009199 6.1e-08 61.2 109 43.1
TAR375G0287 Trochodendron aralioides HOM05D003086 ORTHO05D003347 1.8e-07 59.7 48 56.2
Zm00001eb217410 Zea mays HOM05D007433 ORTHO05D009199 2.3e-07 59.3 104 41.3
ATR0797G001 Amborella trichopoda HOM05D007433 ORTHO05D003347 3.0e-07 58.9 70 44.3
Actinidia18664 Actinidia chinensis HOM05D003086 ORTHO05D003347 5.2e-07 58.2 81 40.7
Oeu010701.1 Olea europaea HOM05D003086 ORTHO05D003347 3.4e-06 55.5 57 49.1
Thecc.01G339800 Theobroma cacao HOM05D003086 ORTHO05D003347 7.5e-06 54.3 56 46.4
Migut.B01892 Erythranthe guttata HOM05D003086 ORTHO05D003347 9.8e-06 53.9 47 53.2
Gohir.A12G248300 Gossypium hirsutum HOM05D003086 ORTHO05D003347 9.8e-06 53.9 48 47.9
Gorai.008G267200 Gossypium raimondii HOM05D003086 ORTHO05D003347 9.8e-06 53.9 48 47.9


User provided reference genes

Program Settings