Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0062841 Lupinus albus HOM05D004288 ORTHO05D004997 1.0e-63 246.5 118 100.0
Lalb_Chr23g0267451 Lupinus albus HOM05D004288 ORTHO05D004997 4.3e-38 161.4 120 72.5
Lalb_Chr08g0245501 Lupinus albus HOM05D004288 ORTHO05D004997 1.7e-18 96.3 51 82.4
Glyma.14G087800 Glycine max HOM05D004288 ORTHO05D004997 2.4e-17 92.4 124 48.4
Psat6g016040 Pisum sativum HOM05D004288 ORTHO05D004997 4.2e-17 91.7 121 46.3
Phvul.001G026500 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 7.1e-17 90.9 124 45.2
Glyma.17G236500 Glycine max HOM05D004288 ORTHO05D004997 1.0e-15 87.0 123 47.2
Rhsim06G0060800 Rhododendron simsii HOM05D004288 ORTHO05D004997 3.3e-14 82.0 110 43.6
Cfa013675 Carpinus fangiana HOM05D004288 ORTHO05D004997 4.3e-14 81.6 116 37.1
VMungo0647G1919 Vigna mungo HOM05D004288 ORTHO05D004997 4.3e-14 81.6 123 40.7
Lj3g0011225 Lotus japonicus HOM05D004288 ORTHO05D004997 7.4e-14 80.9 116 45.7
Actinidia10187 Actinidia chinensis HOM05D004288 ORTHO05D004997 2.1e-13 79.3 110 40.0
Psat6g015560 Pisum sativum HOM05D004288 ORTHO05D004997 2.1e-13 79.3 119 45.4
TPR.G11815 Trifolium pratense HOM05D004288 ORTHO05D004997 2.1e-13 79.3 114 48.2
Actinidia22683 Actinidia chinensis HOM05D004288 ORTHO05D004997 8.1e-13 77.4 110 40.9
CiPaw.07G176600 Carya illinoinensis HOM05D004288 ORTHO05D004997 8.1e-13 77.4 121 38.8
Medtr1g018470 Medicago truncatula HOM05D004288 ORTHO05D004997 1.1e-12 77.0 116 46.6
Medtr1g418505 Medicago truncatula HOM05D004288 ORTHO05D004997 1.1e-12 77.0 116 46.6
Dinv44970 Davidia involucrata HOM05D004288 ORTHO05D004997 5.3e-12 74.7 110 41.8
Lj6g0004688 Lotus japonicus HOM05D004288 ORTHO05D004997 9.0e-12 73.9 117 40.2
MD08G1087000 Malus domestica HOM05D004288 ORTHO05D004997 1.5e-11 73.2 111 43.2
vmacro21447 Vaccinium macrocarpon HOM05D004288 ORTHO05D004997 1.5e-11 73.2 102 41.2
Haze_22316 Corylus avellana HOM05D004288 ORTHO05D004997 4.5e-11 71.6 110 35.5
Lj1g0008863 Lotus japonicus HOM05D004288 ORTHO05D004997 7.6e-11 70.9 120 40.8
MD15G1071700 Malus domestica HOM05D004288 ORTHO05D004997 7.6e-11 70.9 110 39.1
CANSAT25G2350 Cannabis sativa HOM05D004288 ORTHO05D004997 1.7e-10 69.7 111 38.7
Oeu057368.1 Olea europaea HOM05D004288 ORTHO05D004997 1.7e-10 69.7 118 35.6
Phvul.001G026400 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 2.9e-10 68.9 120 39.2
Thecc.08G091000 Theobroma cacao HOM05D004288 ORTHO05D004997 2.9e-10 68.9 120 38.3
Prupe.1G424700 Prunus persica HOM05D004288 ORTHO05D004997 6.4e-10 67.8 116 37.1
Atru.chr13.813 Acer truncatum HOM05D004288 ORTHO05D004997 1.1e-09 67.0 113 37.2
Ciclev10002881m.g Citrus clementina HOM05D004288 ORTHO05D004997 1.1e-09 67.0 110 36.4
Potri.014G017600 Populus trichocarpa HOM05D004288 ORTHO05D004997 1.1e-09 67.0 110 36.4
Psat6g015640 Pisum sativum HOM05D004288 ORTHO05D004997 1.4e-09 66.6 103 42.7
Actinidia38098 Actinidia chinensis HOM05D004288 ORTHO05D004997 2.4e-09 65.9 110 38.2
CiPaw.08G049000 Carya illinoinensis HOM05D004288 ORTHO05D004997 3.2e-09 65.5 118 37.3
Cc10_g05620 Coffea canephora HOM05D004288 ORTHO05D004997 3.2e-09 65.5 111 36.0
VMungo0647G1883 Vigna mungo HOM05D004288 ORTHO05D004997 3.2e-09 65.5 121 42.1
TAR376G0993 Trochodendron aralioides HOM05D004288 ORTHO05D004997 4.2e-09 65.1 110 35.5
TAR628G0045 Trochodendron aralioides HOM05D004288 ORTHO05D004997 5.5e-09 64.7 110 36.4
GSVIVG01009362001 Vitis vinifera HOM05D004288 ORTHO05D004997 5.5e-09 64.7 111 36.9
CSS0041913 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 7.1e-09 64.3 110 37.3
Nitab4.5_0011511g0010 Nicotiana tabacum HOM05D004288 ORTHO05D004997 1.2e-08 63.5 111 36.0
TPR.G3776 Trifolium pratense HOM05D004288 ORTHO05D004997 1.6e-08 63.2 80 43.8
VMungo0647G1736 Vigna mungo HOM05D004288 ORTHO05D004997 2.7e-08 62.4 146 32.2
Duzib116G0008 Durio zibethinus HOM05D004288 ORTHO05D004997 3.5e-08 62.0 110 35.5
CSS0005181 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 4.6e-08 61.6 121 36.4
Duzib041G0778 Durio zibethinus HOM05D004288 ORTHO05D004997 4.6e-08 61.6 121 38.8
Peaxi162Scf00081g01322 Petunia axillaris HOM05D004288 ORTHO05D004997 4.6e-08 61.6 106 35.8
Cpa.g.sc21.102 Carica papaya HOM05D004288 ORTHO05D004997 1.0e-07 60.5 107 38.3
Gohir.A05G208400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 1.0e-07 60.5 110 35.5
TWI56G0562 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 1.0e-07 60.5 114 34.2
MSTRG.1030 Avicennia marina HOM05D004288 ORTHO05D004997 1.3e-07 60.1 111 37.8
Solyc12g088410.3 Solanum lycopersicum HOM05D004288 ORTHO05D004997 1.3e-07 60.1 95 40.0
Sopen12g030390 Solanum pennellii HOM05D004288 ORTHO05D004997 1.3e-07 60.1 71 45.1
Manes.18G045000 Manihot esculenta HOM05D004288 ORTHO05D004997 1.8e-07 59.7 110 35.5
PGSC0003DMG400021529 Solanum tuberosum HOM05D004288 ORTHO05D004997 3.0e-07 58.9 97 38.1
TWI12G0116 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 3.0e-07 58.9 120 34.2
CAN.G107.3 Capsicum annuum HOM05D004288 ORTHO05D004997 8.7e-07 57.4 76 39.5
Eucgr.F00116 Eucalyptus grandis HOM05D004288 ORTHO05D004997 8.7e-07 57.4 110 35.5
QL12p037641 Quercus lobata HOM05D004288 ORTHO05D004997 8.7e-07 57.4 65 35.4
unitig_8.g4880 Utricularia gibba HOM05D004288 ORTHO05D004997 8.7e-07 57.4 76 36.8
HanXRQChr01g0027971 Helianthus annuus HOM05D004288 ORTHO05D004997 1.5e-06 56.6 64 46.9
SalBow6G1935 Salvia bowleyana HOM05D004288 ORTHO05D004997 1.9e-06 56.2 112 30.4
SalBow8G0960 Salvia bowleyana HOM05D004288 ORTHO05D004997 1.9e-06 56.2 112 30.4
MBI16_g22811_MAGBIO Magnolia biondii HOM05D004288 ORTHO05D004997 3.3e-06 55.5 116 33.6
Gohir.D05G211900 Gossypium hirsutum HOM05D004288 ORTHO05D004997 4.3e-06 55.1 114 35.1
Gorai.009G218500 Gossypium raimondii HOM05D004288 ORTHO05D004997 4.3e-06 55.1 114 35.1
PGSC0003DMG401011559 Solanum tuberosum HOM05D004288 ORTHO05D004997 4.3e-06 55.1 64 43.8
ClCG05G020480 Citrullus lanatus HOM05D004288 ORTHO05D004997 9.6e-06 53.9 138 32.6


User provided reference genes

Program Settings