Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0062631 Lupinus albus HOM05D004168 ORTHO05D004999 8.3e-72 273.5 126 100.0
Lalb_Chr23g0267171 Lupinus albus HOM05D004168 ORTHO05D004999 1.8e-58 229.2 111 93.7
arahy.Tifrunner.gnm1.ann1.TVNS6S Arachis hypogaea HOM05D004168 ORTHO05D004999 2.0e-57 225.7 111 92.8
arahy.Tifrunner.gnm1.ann1.85Q9C5 Arachis hypogaea HOM05D004168 ORTHO05D004999 4.4e-57 224.6 111 91.9
arahy.Tifrunner.gnm1.ann1.IT5IHR Arachis hypogaea HOM05D004168 ORTHO05D004999 5.7e-57 224.2 111 91.9
Glyma.04G039100 Glycine max HOM05D004168 ORTHO05D004999 7.5e-57 223.8 118 85.6
Lj1g0018004 Lotus japonicus HOM05D004168 ORTHO05D004999 6.4e-56 220.7 110 90.9
Cpa.g.sc13.291 Carica papaya HOM05D004168 ORTHO05D004999 1.8e-55 219.2 111 89.2
Glyma.06G040100 Glycine max HOM05D004168 ORTHO05D004999 3.2e-55 218.4 111 87.4
TPR.G24157 Trifolium pratense HOM05D004168 ORTHO05D004999 3.2e-55 218.4 110 91.8
Ca_15947_v3 Cicer arietinum L. HOM05D004168 ORTHO05D004999 4.1e-55 218.0 110 90.0
MD08G1101200 Malus domestica HOM05D004168 ORTHO05D004999 1.6e-54 216.1 111 89.2
TWI36G1266 Tripterygium wilfordii HOM05D004168 ORTHO05D004999 1.6e-54 216.1 111 88.3
VMungo1309G0269 Vigna mungo HOM05D004168 ORTHO05D004999 2.0e-54 215.7 111 85.6
Gohir.A05G202600 Gossypium hirsutum HOM05D004168 ORTHO05D004999 2.7e-54 215.3 111 86.5
Gohir.D05G205800 Gossypium hirsutum HOM05D004168 ORTHO05D004999 3.5e-54 214.9 111 86.5
Gorai.009G212100 Gossypium raimondii HOM05D004168 ORTHO05D004999 3.5e-54 214.9 111 86.5
QL12p001799 Quercus lobata HOM05D004168 ORTHO05D004999 3.5e-54 214.9 111 87.4
Psat5g043040 Pisum sativum HOM05D004168 ORTHO05D004999 5.9e-54 214.2 110 89.1
Potri.002G126000 Populus trichocarpa HOM05D004168 ORTHO05D004999 5.9e-54 214.2 111 88.3
Manes.05G174100 Manihot esculenta HOM05D004168 ORTHO05D004999 7.8e-54 213.8 111 86.5
GSVIVG01024177001 Vitis vinifera HOM05D004168 ORTHO05D004999 1.0e-53 213.4 111 86.5
Haze_17522 Corylus avellana HOM05D004168 ORTHO05D004999 1.3e-53 213.0 111 86.5
RcHm_v2.0_Chr6g0307961 Rosa chinensis HOM05D004168 ORTHO05D004999 1.3e-53 213.0 111 88.3
FvH4_2g34410 Fragaria vesca HOM05D004168 ORTHO05D004999 2.9e-53 211.8 111 88.3
FAN24G2672 Fragaria x ananassa HOM05D004168 ORTHO05D004999 2.9e-53 211.8 111 88.3
Prupe.1G435200 Prunus persica HOM05D004168 ORTHO05D004999 2.9e-53 211.8 111 86.5
Ciclev10002229m.g Citrus clementina HOM05D004168 ORTHO05D004999 3.9e-53 211.5 111 87.4
COL.COLO4_26513 Corchorus olitorius HOM05D004168 ORTHO05D004999 5.0e-53 211.1 111 84.7
FAN15G2652 Fragaria x ananassa HOM05D004168 ORTHO05D004999 5.0e-53 211.1 111 87.4
Cfa018557 Carpinus fangiana HOM05D004168 ORTHO05D004999 6.6e-53 210.7 111 84.7
Medtr3g101750 Medicago truncatula HOM05D004168 ORTHO05D004999 8.6e-53 210.3 110 88.2
ClCG05G019900 Citrullus lanatus HOM05D004168 ORTHO05D004999 1.1e-52 209.9 111 86.5
Manes.18G037500 Manihot esculenta HOM05D004168 ORTHO05D004999 1.5e-52 209.5 111 84.7
Sabra02G0098700 Salix brachista HOM05D004168 ORTHO05D004999 1.5e-52 209.5 111 84.7
FAN20G1800 Fragaria x ananassa HOM05D004168 ORTHO05D004999 1.9e-52 209.1 111 87.4
Thecc.08G006900 Theobroma cacao HOM05D004168 ORTHO05D004999 1.9e-52 209.1 111 84.7
GSVIVG01009491001 Vitis vinifera HOM05D004168 ORTHO05D004999 2.5e-52 208.8 111 83.8
MELO3C016753.2 Cucumis melo HOM05D004168 ORTHO05D004999 4.3e-52 208.0 111 84.7
Eucgr.F00224 Eucalyptus grandis HOM05D004168 ORTHO05D004999 4.3e-52 208.0 111 85.6
CsaV3_4G034330 Cucumis sativus L. HOM05D004168 ORTHO05D004999 5.6e-52 207.6 111 83.8
TWI56G0083 Tripterygium wilfordii HOM05D004168 ORTHO05D004999 9.5e-52 206.8 111 84.7
FAN27G1360 Fragaria x ananassa HOM05D004168 ORTHO05D004999 1.2e-51 206.5 108 88.0
Phvul.009G065300 Phaseolus vulgaris HOM05D004168 ORTHO05D004999 1.2e-51 206.5 111 81.1
PGR083G0647 Punica granatum HOM05D004168 ORTHO05D004999 1.6e-51 206.1 111 84.7
CARHR224370 Cardamine hirsuta HOM05D004168 ORTHO05D004999 2.1e-51 205.7 111 83.8
Duzib116G0163 Durio zibethinus HOM05D004168 ORTHO05D004999 8.0e-51 203.8 111 82.0
Aa31LG6G400 Aethionema arabicum HOM05D004168 ORTHO05D004999 1.0e-50 203.4 111 82.0
CANSAT25G0219 Cannabis sativa HOM05D004168 ORTHO05D004999 1.0e-50 203.4 111 82.0
CiPaw.11G099200 Carya illinoinensis HOM05D004168 ORTHO05D004999 1.0e-50 203.4 111 82.9
AUR62016672 Chenopodium quinoa HOM05D004168 ORTHO05D004999 1.0e-50 203.4 116 78.4
AUR62011389 Chenopodium quinoa HOM05D004168 ORTHO05D004999 1.4e-50 203.0 116 78.4
Sed0009126 Sechium edule HOM05D004168 ORTHO05D004999 1.4e-50 203.0 111 83.8
Gorai.010G019900 Gossypium raimondii HOM05D004168 ORTHO05D004999 3.1e-50 201.8 116 78.4
PSO384G0569 Papaver somniferum HOM05D004168 ORTHO05D004999 3.1e-50 201.8 124 75.8
THA.LOC104812820 Tarenaya hassleriana HOM05D004168 ORTHO05D004999 5.2e-50 201.1 111 80.2
AL7G36940 Arabidopsis lyrata HOM05D004168 ORTHO05D004999 6.8e-50 200.7 111 81.1
CiPaw.12G069100 Carya illinoinensis HOM05D004168 ORTHO05D004999 6.8e-50 200.7 111 82.0
Gohir.D06G017000 Gossypium hirsutum HOM05D004168 ORTHO05D004999 8.9e-50 200.3 116 77.6
Hund00296 Selenicereus undatus HOM05D004168 ORTHO05D004999 8.9e-50 200.3 116 79.3
Hund00303 Selenicereus undatus HOM05D004168 ORTHO05D004999 8.9e-50 200.3 116 79.3
Ah.01g019770 Amaranthus hybridus HOM05D004168 ORTHO05D004999 1.2e-49 199.9 116 76.7
EL10Ac9g21781 Beta vulgaris HOM05D004168 ORTHO05D004999 1.5e-49 199.5 111 79.3
Carub.0007s2373 Capsella rubella HOM05D004168 ORTHO05D004999 1.5e-49 199.5 111 80.2
AT4G17650 Arabidopsis thaliana HOM05D004168 ORTHO05D004999 2.6e-49 198.7 111 79.3
BcaC09g51623 Brassica carinata HOM05D004168 ORTHO05D004999 2.6e-49 198.7 111 80.2
BcaNung00072 Brassica carinata HOM05D004168 ORTHO05D004999 2.6e-49 198.7 111 80.2
BcaNung06715 Brassica carinata HOM05D004168 ORTHO05D004999 2.6e-49 198.7 111 80.2
A01p09710 Brassica napus HOM05D004168 ORTHO05D004999 2.6e-49 198.7 111 80.2
A08p13270 Brassica napus HOM05D004168 ORTHO05D004999 2.6e-49 198.7 111 80.2
BraA01t00914Z Brassica rapa HOM05D004168 ORTHO05D004999 2.6e-49 198.7 111 80.2
BraA08t33308Z Brassica rapa HOM05D004168 ORTHO05D004999 2.6e-49 198.7 111 80.2
Sp7g16490 Schrenkiella parvula HOM05D004168 ORTHO05D004999 3.4e-49 198.4 111 80.2
Hund06209 Selenicereus undatus HOM05D004168 ORTHO05D004999 3.4e-49 198.4 116 75.9
EL10As14g24078 Beta vulgaris HOM05D004168 ORTHO05D004999 4.4e-49 198.0 111 78.4
Dinv35958 Davidia involucrata HOM05D004168 ORTHO05D004999 4.4e-49 198.0 111 80.2
C01p11320 Brassica napus HOM05D004168 ORTHO05D004999 5.8e-49 197.6 111 79.3
BolC1t01097H Brassica oleracea HOM05D001479 ORTHO05D001401 5.8e-49 197.6 111 79.3
MBI15_g10497_MAGBIO Magnolia biondii HOM05D004168 ORTHO05D004999 5.8e-49 197.6 118 73.7
CSS0011562 Camellia sinensis var. sinensis HOM05D004168 ORTHO05D004999 7.5e-49 197.2 111 81.1
CSS0013402 Camellia sinensis var. sinensis HOM05D004168 ORTHO05D004999 7.5e-49 197.2 111 81.1
SGA_v2.0_scaffold14G07004 Striga asiatica HOM05D004168 ORTHO05D004999 1.7e-48 196.1 111 78.4
TAR376G0672 Trochodendron aralioides HOM05D004168 ORTHO05D004999 2.2e-48 195.7 111 81.1
DCAR_012778 Daucus carota HOM05D004168 ORTHO05D004999 2.9e-48 195.3 111 78.4
Migut.C00576 Erythranthe guttata HOM05D004168 ORTHO05D004999 3.7e-48 194.9 111 79.3
Lj4A773T42 Lonicera japonica HOM05D004168 ORTHO05D004999 3.7e-48 194.9 116 75.9
Nitab4.5_0000287g0250 Nicotiana tabacum HOM05D004168 ORTHO05D004999 3.7e-48 194.9 116 75.0
Sed0010101 Sechium edule HOM05D004168 ORTHO05D004999 3.7e-48 194.9 111 79.3
PGSC0003DMG401007971 Solanum tuberosum HOM05D004168 ORTHO05D004999 3.7e-48 194.9 116 75.0
BcaB04g18436 Brassica carinata HOM05D004168 ORTHO05D004999 4.9e-48 194.5 111 78.4
Cc10_g04130 Coffea canephora HOM05D004168 ORTHO05D004999 4.9e-48 194.5 111 79.3
Thhalv10026045m.g Eutrema salsugineum HOM05D004168 ORTHO05D004999 4.9e-48 194.5 111 79.3
MSTRG.1350 Avicennia marina HOM05D004168 ORTHO05D004999 6.4e-48 194.1 111 77.5
Nitab4.5_0002760g0060 Nicotiana tabacum HOM05D004168 ORTHO05D004999 6.4e-48 194.1 116 74.1
Sc02g0007150 Simmondsia chinensis HOM05D004168 ORTHO05D004999 8.3e-48 193.7 116 75.0
vmacro21519 Vaccinium macrocarpon HOM05D004168 ORTHO05D004999 8.3e-48 193.7 111 78.4
Os01g0772400 Oryza sativa ssp. japonica HOM05D004168 ORTHO05D004999 1.1e-47 193.4 111 77.5
Rhsim06G0050100 Rhododendron simsii HOM05D004168 ORTHO05D004999 1.1e-47 193.4 111 77.5
TAR628G1263 Trochodendron aralioides HOM05D004168 ORTHO05D004999 1.1e-47 193.4 111 78.4
Actinidia38059 Actinidia chinensis HOM05D004168 ORTHO05D004999 1.4e-47 193.0 111 77.5
DCAR_008795 Daucus carota HOM05D004168 ORTHO05D004999 1.4e-47 193.0 116 72.4
Peaxi162Scf00252g00056 Petunia axillaris HOM05D004168 ORTHO05D004999 1.9e-47 192.6 116 75.0
Solyc04g078890.4 Solanum lycopersicum HOM05D004168 ORTHO05D004999 1.9e-47 192.6 116 74.1
Sopen04g032490 Solanum pennellii HOM05D004168 ORTHO05D004999 1.9e-47 192.6 116 74.1
Actinidia29872 Actinidia chinensis HOM05D004168 ORTHO05D004999 2.4e-47 192.2 111 77.5
Aqoxy1G00522 Aquilegia oxysepala HOM05D004168 ORTHO05D004999 2.4e-47 192.2 111 76.6
DCAR_019452 Daucus carota HOM05D004168 ORTHO05D004999 2.4e-47 192.2 111 75.7
PGR031G2881 Punica granatum HOM05D004168 ORTHO05D004999 2.4e-47 192.2 110 78.2
Rhsim07G0228300 Rhododendron simsii HOM05D004168 ORTHO05D004999 2.4e-47 192.2 111 77.5
unitig_19.g30012 Utricularia gibba HOM05D004168 ORTHO05D004999 2.4e-47 192.2 111 77.5
unitig_8.g5020 Utricularia gibba HOM05D004168 ORTHO05D004999 2.4e-47 192.2 111 77.5
CAN.G1030.1 Capsicum annuum HOM05D004168 ORTHO05D004999 3.2e-47 191.8 116 74.1
SalBow7G4699 Salvia bowleyana HOM05D004168 ORTHO05D004999 3.2e-47 191.8 116 73.3
Oeu043572.2 Olea europaea HOM05D004168 ORTHO05D004999 4.1e-47 191.4 111 77.5
Zm00001eb370050 Zea mays HOM05D004168 ORTHO05D004999 7.0e-47 190.7 111 76.6
Nn2g14539 Nelumbo nucifera HOM05D004168 ORTHO05D004999 1.6e-46 189.5 110 80.0
ECA247G0458 Erigeron canadensis HOM05D004168 ORTHO05D004999 3.5e-46 188.3 115 73.0
HanXRQChr02g0039451 Helianthus annuus HOM05D004168 ORTHO05D004999 1.0e-45 186.8 115 72.2
HPP92_018641 Vanilla planifolia HOM05D004168 ORTHO05D004999 1.3e-45 186.4 111 74.8
HanXRQChr09g0267591 Helianthus annuus HOM05D004168 ORTHO05D004999 3.0e-45 185.3 115 73.0
Aqoxy2G00574 Aquilegia oxysepala HOM05D004168 ORTHO05D004999 5.0e-45 184.5 117 71.8
Lsat_1_v5_gn_1_21041 Lactuca sativa HOM05D004168 ORTHO05D004999 6.6e-45 184.1 115 70.4
MSTRG.22261 Avicennia marina HOM05D004168 ORTHO05D004999 2.5e-44 182.2 116 69.8
Cfa012532 Carpinus fangiana HOM05D004168 ORTHO05D002421 3.3e-44 181.8 111 76.6
Lsat_1_v5_gn_4_125661 Lactuca sativa HOM05D004168 ORTHO05D004999 3.3e-44 181.8 115 69.6
ECA232G1782 Erigeron canadensis HOM05D004168 ORTHO05D004999 2.1e-43 179.1 115 68.7
CDE06G0679 Ceratophyllum demersum HOM05D004168 ORTHO05D004999 3.6e-43 178.3 111 72.1
CANSAT11G0235 Cannabis sativa HOM05D004168 ORTHO05D004999 3.4e-41 171.8 115 69.6
Eucgr.F02343 Eucalyptus grandis HOM05D004168 ORTHO05D004999 4.9e-40 167.9 110 74.5
MD15G1082400 Malus domestica HOM05D004168 ORTHO05D004999 1.4e-39 166.4 111 72.1
Mapoly0004s0036 Marchantia polymorpha HOM05D004168 ORTHO05D004999 2.4e-39 165.6 117 61.5
Gohir.A06G018666 Gossypium hirsutum HOM05D004168 ORTHO05D004999 3.2e-39 165.2 116 66.4
Eucgr.L02367 Eucalyptus grandis HOM05D004168 ORTHO05D004999 6.0e-38 161.0 113 70.8
SEGI_05154 Sequoiadendron giganteum HOM05D004168 ORTHO05D004999 1.3e-37 159.8 108 65.7
Pp3c21_16730 Physcomitrium patens HOM05D004168 ORTHO05D004999 5.1e-37 157.9 111 66.7
BcaC07g38091 Brassica carinata HOM05D004168 ORTHO05D004999 1.1e-36 156.8 111 65.8
CBR_g66636 Chara braunii HOM05D004168 ORTHO05D004999 2.8e-35 152.1 118 58.5
SMO340G0178 Selaginella moellendorffii HOM05D004168 ORTHO05D004999 2.8e-35 152.1 117 59.8
arahy.Tifrunner.gnm1.ann1.ZKL3GY Arachis hypogaea HOM05D004168 ORTHO05D004999 8.1e-35 150.6 85 83.5
AagrBONN_evm.TU.Sc2ySwM_228.4844 Anthoceros agrestis HOM05D004168 ORTHO05D004999 1.2e-33 146.7 118 55.9
Eucgr.F02339 Eucalyptus grandis HOM05D004168 ORTHO05D004999 9.9e-33 143.7 105 67.6
Pp3c22_1290 Physcomitrium patens HOM05D004168 ORTHO05D004999 1.3e-32 143.3 111 60.4
arahy.Tifrunner.gnm1.ann1.F8YVUF Arachis hypogaea HOM05D004168 ORTHO05D004999 5.1e-29 131.3 102 64.7
arahy.Tifrunner.gnm1.ann1.H0AX16 Arachis hypogaea HOM05D004168 ORTHO05D004999 1.1e-28 130.2 71 83.1
Duzib093G1913 Durio zibethinus HOM05D004168 ORTHO05D004999 3.6e-27 125.2 68 82.4
Atru.chr13.696 Acer truncatum HOM05D004168 ORTHO05D004999 4.7e-27 124.8 64 87.5
arahy.Tifrunner.gnm1.ann1.RZ37P0 Arachis hypogaea HOM05D004168 ORTHO05D004999 3.4e-25 118.6 113 55.8
PSO339G0184 Papaver somniferum HOM05D004168 ORTHO05D004999 1.3e-24 116.7 81 69.1
vmacro04448 Vaccinium macrocarpon HOM05D004168 ORTHO05D004999 2.2e-24 115.9 88 60.2
SEGI_12997 Sequoiadendron giganteum HOM05D004168 ORTHO05D004999 1.5e-20 103.2 73 64.4
Zm00001eb151870 Zea mays HOM05D004168 ORTHO05D004999 1.9e-20 102.8 65 69.2
Oeu049977.1 Olea europaea HOM05D004168 ORTHO05D004999 2.0e-17 92.8 68 64.7
AUR62007226 Chenopodium quinoa HOM05D004168 ORTHO05D004999 6.4e-16 87.8 59 64.4
Cre07.g345700 Chlamydomonas reinhardtii HOM05D004168 ORTHO05D004999 4.2e-15 85.1 176 29.5
Gohir.A06G060332 Gossypium hirsutum HOM05D004168 ORTHO05D004999 1.0e-13 80.5 45 77.8
MCO12G423 Micromonas commoda HOM05D004168 ORTHO05D004999 1.0e-13 80.5 109 39.4
Lj6g0018320 Lotus japonicus HOM05D004168 ORTHO05D004999 1.7e-13 79.7 46 73.9
COL.COLO4_26873 Corchorus olitorius HOM05D004168 ORTHO05D004999 2.3e-13 79.3 41 80.5
SEGI_03271 Sequoiadendron giganteum HOM05D004168 ORTHO05D004999 1.9e-12 76.3 45 68.9
arahy.Tifrunner.gnm1.ann1.TNR0C9 Arachis hypogaea HOM05D004168 ORTHO05D004999 2.1e-11 72.8 45 71.1
Gohir.D01G114560 Gossypium hirsutum HOM05D004168 ORTHO05D004999 2.1e-11 72.8 45 71.1
Gorai.002G139800 Gossypium raimondii HOM05D004168 ORTHO05D004999 2.1e-11 72.8 45 71.1
Gohir.D06G118000 Gossypium hirsutum HOM05D004168 ORTHO05D004999 9.9e-09 63.9 43 67.4
arahy.Tifrunner.gnm1.ann1.CBC9PR Arachis hypogaea HOM05D004168 ORTHO05D004999 8.4e-08 60.8 38 65.8


User provided reference genes

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