Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 2.6e-183 645.2 318 100.0
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 1.0e-150 537.0 337 78.3
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 6.5e-150 534.3 345 75.9
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 3.6e-148 528.5 333 78.1
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 3.0e-147 525.4 348 75.9
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 4.4e-146 521.5 348 75.3
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 5.7e-146 521.2 345 74.8
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 2.8e-145 518.8 347 75.8
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 7.0e-144 514.2 337 75.1
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 1.7e-142 509.6 346 74.9
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 1.3e-137 493.4 324 76.9
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 8.3e-137 490.7 326 76.1
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 1.8e-136 489.6 333 71.5
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 9.2e-136 487.3 333 71.5
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.2e-135 486.9 333 71.8
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 1.6e-135 486.5 333 71.5
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 4.6e-135 485.0 333 72.1
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 6.0e-135 484.6 333 70.9
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 7.8e-135 484.2 333 70.9
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 7.8e-135 484.2 333 70.9
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 1.0e-134 483.8 331 71.9
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.3e-134 482.6 333 70.9
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 1.6e-132 476.5 333 71.8
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 3.6e-132 475.3 332 71.4
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 1.8e-131 473.0 336 69.6
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 4.0e-131 471.9 333 70.3
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 9.8e-130 467.2 333 69.4
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 1.7e-129 466.5 333 70.9
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 1.4e-128 463.4 333 68.5
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.4e-128 462.6 333 69.4
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 9.2e-128 460.7 333 69.7
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.7e-127 459.1 333 68.2
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 2.7e-127 459.1 331 68.9
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 1.0e-126 457.2 333 68.5
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.0e-126 455.7 326 69.3
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.3e-125 451.8 332 68.4
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 4.3e-125 451.8 324 69.4
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 1.6e-124 449.9 305 73.4
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 1.5e-122 443.4 330 67.3
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 5.8e-122 441.4 333 64.9
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 6.4e-121 438.0 333 66.1
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.4e-120 436.8 332 67.5
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 5.4e-120 434.9 337 64.7
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 1.2e-119 433.7 335 64.5
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 2.1e-119 433.0 334 65.6
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 3.5e-119 432.2 332 63.9
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 3.5e-119 432.2 326 65.6
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 6.0e-119 431.4 331 64.7
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 1.7e-118 429.9 331 65.0
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.3e-118 429.5 335 64.5
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 3.9e-118 428.7 321 65.4
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 3.9e-118 428.7 325 66.2
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 5.1e-118 428.3 318 67.0
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 1.9e-117 426.4 318 67.6
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 2.5e-117 426.0 331 64.0
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 9.5e-117 424.1 334 65.0
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.1e-116 422.9 334 63.5
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 2.1e-116 422.9 323 66.3
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 8.1e-116 421.0 331 64.4
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 8.1e-116 421.0 331 64.0
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 8.1e-116 421.0 331 64.4
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.8e-115 417.9 331 64.4
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.0e-114 416.4 331 64.4
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 5.8e-114 414.8 334 61.4
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 7.6e-114 414.5 334 62.9
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 1.3e-113 413.7 340 62.6
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 2.4e-112 409.5 331 62.5
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.2e-111 407.1 323 63.2
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.7e-110 403.3 332 62.0
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 3.0e-110 402.5 325 63.1
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 8.7e-110 401.0 322 63.0
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 1.5e-109 400.2 326 62.6
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 1.5e-109 400.2 323 63.5
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 1.9e-109 399.8 322 63.0
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 1.9e-109 399.8 322 63.0
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 4.3e-109 398.7 322 62.4
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 4.3e-109 398.7 322 62.4
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 4.3e-109 398.7 322 62.4
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 4.3e-109 398.7 332 61.1
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 9.6e-109 397.5 309 63.4
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 2.8e-108 396.0 322 62.1
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 1.8e-107 393.3 323 61.6
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 1.5e-106 390.2 316 62.3
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.5e-106 390.2 314 62.7
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 4.9e-105 385.2 319 60.8
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 3.2e-104 382.5 327 59.0
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 3.0e-102 375.9 316 58.5
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.5e-93 347.1 331 55.6
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 3.3e-93 345.9 334 54.5
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 1.1e-88 330.9 316 53.8
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 2.1e-87 326.6 310 53.2
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 6.9e-83 311.6 317 52.4
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.9e-81 306.2 286 56.3
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 1.7e-73 280.4 215 66.5
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 2.2e-73 280.0 317 47.0
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.2e-73 280.0 310 49.7
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.9e-73 279.6 205 67.3
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 3.8e-73 279.3 308 49.4
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.5e-66 257.3 203 63.5
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.0e-65 254.6 206 62.6
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.8e-65 252.7 236 57.6
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.8e-60 235.7 132 81.8
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.0e-54 216.5 157 68.8
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 9.1e-51 204.9 177 57.1
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.0e-49 201.4 163 61.3
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 8.0e-47 191.8 132 70.5
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 4.4e-45 186.0 138 66.7
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.8e-43 180.6 223 48.0
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.0e-42 177.2 134 66.4
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.2e-41 173.7 284 40.5
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 6.5e-41 172.2 88 86.4
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 8.5e-41 171.8 144 61.8
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.7e-26 123.6 135 49.6
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.9e-25 120.2 130 53.1
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 7.5e-13 79.0 159 36.5
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 5.4e-11 72.8 69 56.5
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 4.6e-10 69.7 117 38.5
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.6e-07 60.1 40 67.5


User provided reference genes

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