Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 3.3e-167 591.7 305 100.0
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 8.9e-80 301.2 229 73.8
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 3.5e-76 289.3 229 69.0
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 1.3e-75 287.3 229 69.0
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 3.0e-75 286.2 227 69.6
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 3.9e-75 285.8 224 70.5
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 6.6e-75 285.0 225 70.7
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 3.3e-74 282.7 226 70.4
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 3.3e-74 282.7 227 69.2
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 7.3e-74 281.6 220 70.9
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 1.8e-72 276.9 189 75.7
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 9.6e-66 254.6 233 58.4
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 1.6e-65 253.8 241 58.9
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 2.1e-65 253.4 236 61.0
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 3.7e-65 252.7 240 61.7
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 8.1e-65 251.5 239 57.7
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 1.8e-64 250.4 226 58.8
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 1.5e-63 247.3 220 60.0
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 2.9e-62 243.0 192 65.1
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 2.9e-62 243.0 228 59.2
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 8.4e-62 241.5 234 58.1
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 8.4e-62 241.5 226 57.1
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 8.4e-62 241.5 194 66.0
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.4e-61 240.7 235 57.9
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 3.2e-61 239.6 192 65.6
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 4.2e-61 239.2 237 57.4
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 1.2e-60 237.7 211 59.2
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 2.7e-60 236.5 201 62.7
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 3.5e-60 236.1 191 63.4
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 4.6e-60 235.7 200 61.5
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 6.0e-60 235.3 203 61.1
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 7.9e-60 235.0 200 60.5
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 2.3e-59 233.4 192 64.1
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 3.0e-59 233.0 216 58.3
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 1.5e-58 230.7 191 59.7
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 2.5e-58 229.9 224 56.2
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 1.3e-57 227.6 231 56.3
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.6e-57 227.3 174 62.1
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 2.8e-57 226.5 223 55.6
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 2.8e-57 226.5 194 61.9
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 3.7e-57 226.1 181 59.7
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 3.7e-57 226.1 226 53.5
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 3.7e-57 226.1 204 57.8
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 6.2e-57 225.3 173 63.6
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.4e-56 224.2 172 64.0
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 2.4e-56 223.4 227 54.6
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 4.0e-56 222.6 199 62.3
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 1.2e-55 221.1 215 55.3
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 1.2e-55 221.1 190 60.5
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 4.5e-55 219.2 229 55.9
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 7.6e-55 218.4 193 57.5
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 7.6e-55 218.4 196 57.7
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 7.6e-55 218.4 174 60.3
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 1.7e-54 217.2 178 63.5
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 1.7e-54 217.2 174 59.8
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 2.2e-54 216.9 224 52.7
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 2.9e-54 216.5 222 51.4
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 3.8e-54 216.1 221 53.4
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 4.9e-54 215.7 193 58.0
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 8.4e-54 214.9 205 59.5
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 1.1e-53 214.5 163 62.6
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 2.5e-53 213.4 193 57.5
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 5.5e-53 212.2 219 53.0
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 7.1e-53 211.8 193 57.5
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 7.1e-53 211.8 222 54.5
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 1.2e-52 211.1 193 56.5
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 1.6e-52 210.7 207 56.0
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 2.1e-52 210.3 224 52.7
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 2.7e-52 209.9 193 56.5
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 2.7e-52 209.9 193 56.5
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 7.9e-52 208.4 226 53.1
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 7.9e-52 208.4 164 65.9
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 5.1e-51 205.7 193 56.0
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 1.1e-50 204.5 216 54.2
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 4.3e-50 202.6 122 83.6
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 3.1e-48 196.4 171 55.6
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 7.6e-47 191.8 227 49.3
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 1.3e-46 191.0 162 61.1
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 1.7e-46 190.7 170 60.0
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 6.5e-46 188.7 196 56.1
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 1.9e-45 187.2 210 53.3
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 3.2e-45 186.4 277 44.0
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 3.9e-43 179.5 220 50.0
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 1.8e-40 170.6 185 50.8
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 3.1e-40 169.9 185 50.3
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 2.9e-38 163.3 192 44.8
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 8.5e-38 161.8 188 46.8
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 1.9e-37 160.6 224 45.1
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 4.2e-37 159.5 160 55.6
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 1.2e-36 157.9 220 41.4
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 1.4e-35 154.5 212 45.8
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 1.4e-35 154.5 151 54.3
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 6.3e-33 145.6 169 45.6
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 1.1e-32 144.8 170 44.1
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 7.7e-31 138.7 113 62.8
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 2.9e-30 136.7 195 39.5
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.1e-28 130.6 134 50.7
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 3.9e-27 126.3 98 63.3
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 1.2e-23 114.8 89 64.0
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 7.7e-23 112.1 88 61.4
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 2.3e-19 100.5 97 54.6
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 8.8e-19 98.6 95 51.6
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 1.7e-17 94.4 109 46.8
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 4.1e-16 89.7 220 30.9
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 3.4e-10 70.1 54 57.4
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 5.0e-06 56.2 45 55.6
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 8.6e-06 55.5 103 38.8


User provided reference genes

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