Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0061991 Lupinus albus HOM05D005344 ORTHO05D006444 6.9e-66 253.8 129 100.0
CiPaw.08G064300 Carya illinoinensis HOM05D005344 ORTHO05D006444 1.1e-55 219.9 129 84.5
Psat5g014400 Pisum sativum HOM05D005344 ORTHO05D006444 1.4e-55 219.5 129 86.8
QL03p018250 Quercus lobata HOM05D005344 ORTHO05D006444 1.4e-55 219.5 128 82.8
PGR083G0019 Punica granatum HOM05D005344 ORTHO05D006444 1.9e-55 219.2 129 85.3
arahy.Tifrunner.gnm1.ann1.Y8FRL8 Arachis hypogaea HOM05D005344 ORTHO05D006444 2.5e-55 218.8 129 85.3
Nn6g32300 Nelumbo nucifera HOM05D005344 ORTHO05D006444 2.5e-55 218.8 129 85.3
PGR102G3231 Punica granatum HOM05D005344 ORTHO05D006444 3.2e-55 218.4 127 86.6
QL02p011006 Quercus lobata HOM05D005344 ORTHO05D006444 4.2e-55 218.0 128 83.6
CANSAT56G2098 Cannabis sativa HOM05D005344 ORTHO05D006444 7.2e-55 217.2 129 84.5
Potri.004G228566 Populus trichocarpa HOM05D005344 ORTHO05D006444 9.4e-55 216.9 129 85.3
Atru.chr12.1135 Acer truncatum HOM05D005344 ORTHO05D006444 1.2e-54 216.5 127 85.0
CANSAT56G2754 Cannabis sativa HOM05D005344 ORTHO05D006444 2.7e-54 215.3 129 83.7
TPR.G5807 Trifolium pratense HOM05D005344 ORTHO05D006444 2.7e-54 215.3 130 85.4
TAR381G0484 Trochodendron aralioides HOM05D005344 ORTHO05D006444 2.7e-54 215.3 129 83.7
Medtr3g113260 Medicago truncatula HOM05D005344 ORTHO05D006444 4.7e-54 214.5 129 84.5
Gohir.D05G218100 Gossypium hirsutum HOM05D005344 ORTHO05D006444 6.1e-54 214.2 129 83.7
Medtr1g013440 Medicago truncatula HOM05D005344 ORTHO05D006444 6.1e-54 214.2 129 85.3
Lj1g0020845 Lotus japonicus HOM05D005344 ORTHO05D006444 7.9e-54 213.8 129 84.5
GSVIVG01009861001 Vitis vinifera HOM05D005344 ORTHO05D006444 7.9e-54 213.8 129 82.9
Gohir.A05G214800 Gossypium hirsutum HOM05D005344 ORTHO05D006444 1.0e-53 213.4 129 83.7
Glyma.06G025600 Glycine max HOM05D005344 ORTHO05D006444 1.4e-53 213.0 129 84.5
TPR.G38895 Trifolium pratense HOM05D005344 ORTHO05D006444 1.4e-53 213.0 129 84.5
Duzib093G0333 Durio zibethinus HOM05D005344 ORTHO05D006444 1.8e-53 212.6 129 82.9
FAN15G2308 Fragaria x ananassa HOM05D005344 ORTHO05D006444 1.8e-53 212.6 129 82.9
Phvul.009G015400 Phaseolus vulgaris HOM05D005344 ORTHO05D006444 3.0e-53 211.8 129 85.3
RcHm_v2.0_Chr6g0302491 Rosa chinensis HOM05D005344 ORTHO05D006444 5.2e-53 211.1 129 81.4
Cpa.g.sc116.53 Carica papaya HOM05D005344 ORTHO05D006444 6.7e-53 210.7 127 82.7
Cc10_g01930 Coffea canephora HOM05D005344 ORTHO05D006444 8.8e-53 210.3 129 81.4
FvH4_2g38800 Fragaria vesca HOM05D005344 ORTHO05D006444 8.8e-53 210.3 129 81.4
TWI75G1031 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 8.8e-53 210.3 129 82.9
HanXRQChr15g0480961 Helianthus annuus HOM05D005344 ORTHO05D006444 1.1e-52 209.9 129 82.2
Thecc.08G040900 Theobroma cacao HOM05D005344 ORTHO05D006444 1.1e-52 209.9 129 82.2
CSS0034614 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 1.5e-52 209.5 129 81.4
Prupe.1G182400 Prunus persica HOM05D005344 ORTHO05D006444 1.5e-52 209.5 129 81.4
Prupe.1G368800 Prunus persica HOM05D005344 ORTHO05D006444 2.6e-52 208.8 129 81.4
TWI31G0971 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 2.6e-52 208.8 129 81.4
HanXRQChr04g0119171 Helianthus annuus HOM05D005344 ORTHO05D006444 3.3e-52 208.4 129 82.2
Cfa013923 Carpinus fangiana HOM05D005344 ORTHO05D006444 4.4e-52 208.0 128 81.2
SGA_v2.0_scaffold47G17494 Striga asiatica HOM05D005344 ORTHO05D006444 4.4e-52 208.0 129 79.8
Dinv39499 Davidia involucrata HOM05D005344 ORTHO05D006444 5.7e-52 207.6 129 81.4
MD02G1241500 Malus domestica HOM05D005344 ORTHO05D006444 7.4e-52 207.2 129 79.8
Lsat_1_v5_gn_7_29421 Lactuca sativa HOM05D005344 ORTHO05D006444 1.3e-51 206.5 129 80.6
MD07G1075400 Malus domestica HOM05D005344 ORTHO05D006444 1.7e-51 206.1 129 79.8
Nitab4.5_0006992g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 2.2e-51 205.7 129 79.8
Nitab4.5_0001988g0010 Nicotiana tabacum HOM05D005344 ORTHO05D006444 2.8e-51 205.3 129 79.8
Actinidia15404 Actinidia chinensis HOM05D005344 ORTHO05D006444 4.8e-51 204.5 123 78.9
Manes.18G015800 Manihot esculenta HOM05D005344 ORTHO05D006444 4.8e-51 204.5 129 80.6
Solyc04g081220.3 Solanum lycopersicum HOM05D005344 ORTHO05D006444 4.8e-51 204.5 129 79.1
Sopen04g034830 Solanum pennellii HOM05D005344 ORTHO05D006444 4.8e-51 204.5 129 79.1
Glyma.04G025800 Glycine max HOM05D005344 ORTHO05D006444 6.3e-51 204.1 129 81.4
Sabra01G0173600 Salix brachista HOM05D005344 ORTHO05D006444 6.3e-51 204.1 120 84.2
Eucgr.F01631 Eucalyptus grandis HOM05D005344 ORTHO05D006444 8.2e-51 203.8 124 81.5
PGSC0003DMG400003723 Solanum tuberosum HOM05D005344 ORTHO05D006444 8.2e-51 203.8 129 79.1
ECA236G2959 Erigeron canadensis HOM05D005344 ORTHO05D006444 1.4e-50 203.0 129 78.3
Migut.N03145 Erythranthe guttata HOM05D005344 ORTHO05D006444 1.4e-50 203.0 129 76.0
arahy.Tifrunner.gnm1.ann1.2J2T1L Arachis hypogaea HOM05D005344 ORTHO05D006444 3.1e-50 201.8 122 82.0
Potri.012G106900 Populus trichocarpa HOM05D005344 ORTHO05D006444 3.1e-50 201.8 119 84.9
VMungo1309G2030 Vigna mungo HOM05D005344 ORTHO05D006444 3.1e-50 201.8 122 85.2
arahy.Tifrunner.gnm1.ann1.0YI8WX Arachis hypogaea HOM05D005344 ORTHO05D006444 7.0e-50 200.7 119 83.2
Sc02g0008440 Simmondsia chinensis HOM05D005344 ORTHO05D006444 9.1e-50 200.3 129 74.4
BcaB06g27347 Brassica carinata HOM05D005344 ORTHO05D006444 1.2e-49 199.9 129 78.3
BolC4t26183H Brassica oleracea HOM05D005344 ORTHO05D006444 1.2e-49 199.9 129 78.3
BraA04t16898Z Brassica rapa HOM05D005344 ORTHO05D006444 1.2e-49 199.9 129 78.3
Carub.0007s3634 Capsella rubella HOM05D005344 ORTHO05D006444 1.2e-49 199.9 127 79.5
Sed0018322 Sechium edule HOM05D005344 ORTHO05D006444 1.6e-49 199.5 127 78.0
vmacro04337 Vaccinium macrocarpon HOM05D005344 ORTHO05D006444 1.6e-49 199.5 119 82.4
MSTRG.24255 Avicennia marina HOM05D005344 ORTHO05D006444 2.0e-49 199.1 129 77.5
Haze_22604 Corylus avellana HOM05D005344 ORTHO05D006444 2.6e-49 198.7 119 83.2
Rhsim07G0245900 Rhododendron simsii HOM05D005344 ORTHO05D006444 3.5e-49 198.4 119 80.7
AT5G39600 Arabidopsis thaliana HOM05D005344 ORTHO05D006444 4.5e-49 198.0 127 78.0
Gorai.009G225000 Gossypium raimondii HOM05D005344 ORTHO05D006444 4.5e-49 198.0 119 82.4
DCAR_013854 Daucus carota HOM05D005344 ORTHO05D006444 5.9e-49 197.6 119 80.7
Sp7g02390 Schrenkiella parvula HOM05D005344 ORTHO05D006444 5.9e-49 197.6 127 77.2
Aa31LG9G16480 Aethionema arabicum HOM05D005344 ORTHO05D006444 1.0e-48 196.8 127 75.6
CSS0046173 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 1.0e-48 196.8 119 82.4
Peaxi162Scf00287g01714 Petunia axillaris HOM05D005344 ORTHO05D006444 1.0e-48 196.8 129 76.0
CSS0046670 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 1.3e-48 196.4 121 80.2
CARHR262690 Cardamine hirsuta HOM05D005344 ORTHO05D006444 1.3e-48 196.4 127 77.2
Ca_16814_v3 Cicer arietinum L. HOM05D005344 ORTHO05D006444 2.2e-48 195.7 119 83.2
FAN20G2570 Fragaria x ananassa HOM05D005344 ORTHO05D006444 2.2e-48 195.7 119 80.7
CsaV3_3G045650 Cucumis sativus L. HOM05D005344 ORTHO05D006444 2.9e-48 195.3 127 78.0
Thhalv10027992m.g Eutrema salsugineum HOM05D005344 ORTHO05D006444 2.9e-48 195.3 127 77.2
PSO541G4852 Papaver somniferum HOM05D005344 ORTHO05D006444 2.9e-48 195.3 129 75.2
PSO675G5369 Papaver somniferum HOM05D005344 ORTHO05D006444 2.9e-48 195.3 129 75.2
TAR625G0974 Trochodendron aralioides HOM05D005344 ORTHO05D006444 8.5e-48 193.7 129 73.6
arahy.Tifrunner.gnm1.ann1.NGB00B Arachis hypogaea HOM05D005344 ORTHO05D006444 1.5e-47 193.0 119 81.5
AL7G50710 Arabidopsis lyrata HOM05D005344 ORTHO05D006444 2.5e-47 192.2 127 75.6
COL.COLO4_32025 Corchorus olitorius HOM05D005344 ORTHO05D006444 4.2e-47 191.4 119 79.8
Nitab4.5_0005425g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 9.4e-47 190.3 119 78.2
CDE05G1229 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 2.1e-46 189.1 129 73.6
ClCG05G018520 Citrullus lanatus HOM05D005344 ORTHO05D006444 2.1e-46 189.1 119 79.8
SalBow8G2912 Salvia bowleyana HOM05D005344 ORTHO05D006444 2.7e-46 188.7 119 77.3
Oeu031192.1 Olea europaea HOM05D005344 ORTHO05D006444 3.6e-46 188.3 119 75.6
Oeu024518.1 Olea europaea HOM05D005344 ORTHO05D006444 1.0e-45 186.8 119 75.6
A04p12340 Brassica napus HOM05D005344 ORTHO05D006444 2.3e-45 185.7 121 76.9
C04p46010 Brassica napus HOM05D005344 ORTHO05D006444 2.3e-45 185.7 121 76.9
CAN.G1271.12 Capsicum annuum HOM05D005344 ORTHO05D006444 2.3e-45 185.7 119 76.5
HPP92_014936 Vanilla planifolia HOM05D005344 ORTHO05D006444 3.0e-45 185.3 128 73.4
FvH4_1g25620 Fragaria vesca HOM05D005344 ORTHO05D006444 6.7e-45 184.1 127 73.2
Aqoxy6G02319 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 3.3e-44 181.8 129 69.8
Aqoxy6G02944 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 3.3e-44 181.8 119 73.9
EL10Ac1g02258 Beta vulgaris HOM05D005344 ORTHO05D006444 3.3e-44 181.8 128 67.2
unitig_899.g15276 Utricularia gibba HOM05D005344 ORTHO05D006444 7.5e-44 180.6 148 64.9
AUR62035723 Chenopodium quinoa HOM05D005344 ORTHO05D006444 1.7e-43 179.5 146 62.3
arahy.Tifrunner.gnm1.ann1.3U1GZ3 Arachis hypogaea HOM05D005344 ORTHO05D006444 2.2e-43 179.1 107 84.1
CDE05G1331 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 2.8e-43 178.7 119 73.9
Ciclev10002838m.g Citrus clementina HOM05D005344 ORTHO05D006444 4.8e-43 177.9 127 70.1
arahy.Tifrunner.gnm1.ann1.IGJ8TG Arachis hypogaea HOM05D005344 ORTHO05D006444 8.2e-43 177.2 105 84.8
MELO3C003771.2 Cucumis melo HOM05D005344 ORTHO05D006444 1.8e-42 176.0 113 77.9
TAR625G1223 Trochodendron aralioides HOM05D005344 ORTHO05D006444 1.8e-42 176.0 117 72.6
AUR62035436 Chenopodium quinoa HOM05D005344 ORTHO05D006444 3.1e-42 175.3 119 68.9
FAN23G0736 Fragaria x ananassa HOM05D005344 ORTHO05D006444 3.1e-42 175.3 130 70.8
FAN26G0652 Fragaria x ananassa HOM05D005344 ORTHO05D006444 9.1e-42 173.7 122 70.5
ATR0665G498 Amborella trichopoda HOM05D005344 ORTHO05D006444 7.7e-41 170.6 129 69.0
FAN19G0275 Fragaria x ananassa HOM05D005344 ORTHO05D006444 1.0e-40 170.2 121 71.1
SHI08085 Sapria himalayana HOM05D005344 ORTHO05D006444 5.0e-40 167.9 119 69.7
MBI05_g26505_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 4.2e-39 164.9 107 76.6
Manes.09G054100 Manihot esculenta HOM05D005344 ORTHO05D006444 1.6e-38 162.9 119 65.5
Atru.chr4.1572 Acer truncatum HOM05D005344 ORTHO05D006444 3.6e-38 161.8 133 67.7
arahy.Tifrunner.gnm1.ann1.Y1NSFR Arachis hypogaea HOM05D005344 ORTHO05D006444 6.1e-38 161.0 96 84.4
arahy.Tifrunner.gnm1.ann1.2QY3VR Arachis hypogaea HOM05D005344 ORTHO05D006444 1.4e-37 159.8 109 77.1
arahy.Tifrunner.gnm1.ann1.H9RICG Arachis hypogaea HOM05D005344 ORTHO05D006444 5.2e-37 157.9 95 83.2
arahy.Tifrunner.gnm1.ann1.ZTTZ43 Arachis hypogaea HOM05D005344 ORTHO05D006444 5.2e-37 157.9 96 83.3
MSTRG.22330 Avicennia marina HOM05D005344 ORTHO05D006444 1.6e-33 146.4 97 71.1
Pp3c9_11020 Physcomitrium patens HOM05D005344 ORTHO05D006444 3.5e-33 145.2 129 58.9
Gorai.005G111500 Gossypium raimondii HOM05D005344 ORTHO05D006444 1.2e-30 136.7 100 69.0
Os02g0282100 Oryza sativa ssp. japonica HOM05D005344 ORTHO05D006444 6.1e-30 134.4 143 51.0
Mapoly0151s0020 Marchantia polymorpha HOM05D005344 ORTHO05D006444 4.0e-29 131.7 113 54.9
ATR0605G109 Amborella trichopoda HOM05D005344 ORTHO05D006444 1.2e-28 130.2 92 71.7
AagrBONN_evm.TU.Sc2ySwM_117.1156 Anthoceros agrestis HOM05D005344 ORTHO05D006444 2.8e-27 125.6 99 60.6
MBI07_g11722_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 8.3e-27 124.0 85 74.1
Zm00001eb237200 Zea mays HOM05D005344 ORTHO05D006444 1.4e-26 123.2 141 46.8
Hund00462 Selenicereus undatus HOM05D005344 ORTHO05D006444 7.8e-25 117.5 113 50.4
arahy.Tifrunner.gnm1.ann1.3DP3ZG Arachis hypogaea HOM05D005344 ORTHO05D006444 1.6e-14 83.2 46 84.8
CSS0040415 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 1.3e-08 63.5 39 74.4
CSS0035037 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 9.5e-07 57.4 39 74.4
CBR_g48744 Chara braunii HOM05D005344 ORTHO05D006444 6.2e-06 54.7 66 39.4


User provided reference genes

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