Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 7.0e-139 497.3 250 100.0
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 8.7e-73 277.7 277 59.6
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 8.5e-36 154.8 274 41.6
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 1.6e-34 150.6 282 40.4
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 2.1e-34 150.2 256 42.2
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 7.9e-34 148.3 281 40.9
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 3.7e-31 139.4 280 41.1
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 1.1e-27 127.9 259 35.5
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 2.6e-24 116.7 284 36.3
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 2.2e-20 103.6 311 30.9
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 6.5e-20 102.1 284 34.2
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 6.5e-20 102.1 216 39.4
Lalb_Chr24g0398711 Lupinus albus HOM05D007760 ORTHO05D008337 8.5e-20 101.7 305 34.1
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.5e-19 100.9 289 33.6
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 4.7e-18 95.9 273 31.5
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 8.0e-18 95.1 275 34.2
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 2.3e-17 93.6 251 33.9
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 6.8e-17 92.0 318 33.0
Psat6g002720 Pisum sativum HOM05D007760 ORTHO05D008337 1.2e-16 91.3 252 33.7
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 1.5e-16 90.9 248 31.9
Psat6g002640 Pisum sativum HOM05D007760 ORTHO05D008337 3.4e-16 89.7 240 34.2
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 4.4e-16 89.4 285 33.7
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 5.7e-16 89.0 264 32.6
Ca_13430_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 9.8e-16 88.2 268 33.6
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 1.7e-15 87.4 209 35.4
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 2.2e-15 87.0 209 35.4
Psat6g002560 Pisum sativum HOM05D007760 ORTHO05D008337 2.8e-15 86.7 216 33.8
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 4.8e-15 85.9 157 40.1
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 6.3e-15 85.5 309 30.1
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 1.1e-14 84.7 235 34.9
Psat6g002840 Pisum sativum HOM05D007760 ORTHO05D008337 2.4e-14 83.6 260 31.9
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 1.2e-13 81.3 268 30.2
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 1.6e-13 80.9 187 38.0
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 2.0e-13 80.5 291 30.6
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 4.5e-13 79.3 286 29.4
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 5.9e-13 79.0 282 28.7
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 5.9e-13 79.0 253 33.6
Atru.chr13.288 Acer truncatum HOM05D007760 ORTHO05D008337 1.7e-12 77.4 303 29.0
Haze_22637 Corylus avellana HOM05D007760 ORTHO05D008337 1.7e-12 77.4 190 33.2
TPR.G434 Trifolium pratense HOM05D007760 ORTHO05D008337 1.7e-12 77.4 187 31.6
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 2.9e-12 76.6 219 33.8
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 2.9e-12 76.6 202 32.7
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 3.8e-12 76.3 217 35.5
Manes.05G147200 Manihot esculenta HOM05D007760 ORTHO05D008337 6.5e-12 75.5 305 27.5
Sed0012610 Sechium edule HOM05D016278 ORTHO05D008337 8.6e-12 75.1 198 31.8
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.5e-11 73.6 150 40.0
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 3.2e-11 73.2 118 43.2
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 4.2e-11 72.8 190 35.8
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 5.5e-11 72.4 215 34.0
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 7.2e-11 72.0 202 31.7
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 7.2e-11 72.0 176 35.2
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 9.5e-11 71.6 230 32.6
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 9.5e-11 71.6 202 33.7
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.2e-10 71.2 229 33.2
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.6e-10 70.9 215 33.5
MELO3C011015.2 Cucumis melo HOM05D016278 ORTHO05D008337 2.1e-10 70.5 279 29.0
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 3.6e-10 69.7 332 29.2
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 4.7e-10 69.3 306 27.5
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 4.7e-10 69.3 229 32.8
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 6.1e-10 68.9 175 33.7
CsaV3_2G029560 Cucumis sativus L. HOM05D016278 ORTHO05D008337 8.0e-10 68.6 211 30.8
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 1.0e-09 68.2 227 31.3
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.4e-09 67.8 228 32.0
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 1.8e-09 67.4 202 30.2
Lalb_Chr22g0354321 Lupinus albus HOM05D007760 ORTHO05D008337 2.3e-09 67.0 303 28.7
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 2.3e-09 67.0 166 33.7
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 2.3e-09 67.0 150 35.3
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 3.0e-09 66.6 199 30.7
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 4.0e-09 66.2 271 28.8
Medtr1g025310 Medicago truncatula HOM05D007760 ORTHO05D008337 4.0e-09 66.2 283 25.8
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 4.0e-09 66.2 205 33.2
Gohir.A06G003900 Gossypium hirsutum HOM05D007760 ORTHO05D008337 6.8e-09 65.5 229 32.3
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 8.8e-09 65.1 255 30.2
Ca_13429_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 1.5e-08 64.3 239 30.1
RcHm_v2.0_Chr6g0302891 Rosa chinensis HOM05D015458 ORTHO05D008337 2.0e-08 63.9 164 33.5
Duzib093G0245 Durio zibethinus HOM05D007760 ORTHO05D008337 3.4e-08 63.2 195 29.2
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 5.7e-08 62.4 169 32.5
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 9.8e-08 61.6 249 27.7
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 2.8e-07 60.1 124 36.3
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 2.8e-07 60.1 218 29.8
Nn5g29094 Nelumbo nucifera HOM05D007760 ORTHO05D008337 3.7e-07 59.7 165 34.5
MD15G1011900 Malus domestica HOM05D015458 ORTHO05D008337 1.8e-06 57.4 239 28.5
Sc15g0004960 Simmondsia chinensis HOM05D007760 ORTHO05D008337 1.8e-06 57.4 237 30.8
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 2.4e-06 57.0 199 29.1
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 2.4e-06 57.0 76 40.8
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 7.0e-06 55.5 120 39.2


User provided reference genes

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