Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0061731 Lupinus albus HOM05D002849 ORTHO05D009472 1.5e-50 202.6 107 100.0
Potri.002G013601 Populus trichocarpa HOM05D002849 ORTHO05D009472 3.6e-28 128.3 107 61.7
TAR381G0186 Trochodendron aralioides HOM05D002849 ORTHO05D009472 1.1e-27 126.7 108 63.9
VMungo1309G2595 Vigna mungo HOM05D002849 ORTHO05D009472 4.0e-27 124.8 108 63.0
Prupe.1G357000 Prunus persica HOM05D002849 ORTHO05D009472 6.9e-27 124.0 107 62.6
Ca_15446_v3 Cicer arietinum L. HOM05D002849 ORTHO05D009472 1.5e-26 122.9 106 59.4
Ciclev10002910m.g Citrus clementina HOM05D002849 ORTHO05D009472 1.5e-26 122.9 108 62.0
Sabra02G0010600 Salix brachista HOM05D002849 ORTHO05D009472 2.0e-26 122.5 107 58.9
TPR.G38106 Trifolium pratense HOM05D002849 ORTHO05D009472 2.0e-26 122.5 104 60.6
CAN.G311.94 Capsicum annuum HOM05D002849 ORTHO05D009472 4.5e-26 121.3 104 59.6
Glyma.06G019700 Glycine max HOM05D002849 ORTHO05D009472 5.8e-26 120.9 110 60.0
Medtr3g115060 Medicago truncatula HOM05D002849 ORTHO05D009472 5.8e-26 120.9 107 61.7
Psat5g010840 Pisum sativum HOM05D002849 ORTHO05D009472 5.8e-26 120.9 106 59.4
Glyma.04G019400 Glycine max HOM05D002849 ORTHO05D009472 7.6e-26 120.6 110 59.1
QL02p013572 Quercus lobata HOM05D002849 ORTHO05D009472 2.2e-25 119.0 102 61.8
Ah.00g000480 Amaranthus hybridus HOM05D002849 ORTHO05D009472 3.8e-25 118.2 105 58.1
CANSAT80G0154 Cannabis sativa HOM05D002849 ORTHO05D009472 4.9e-25 117.9 105 61.0
CANSAT80G2323 Cannabis sativa HOM05D002849 ORTHO05D009472 4.9e-25 117.9 105 61.0
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 6.4e-25 117.5 102 60.8
Sed0019383 Sechium edule HOM05D002849 ORTHO05D009472 6.4e-25 117.5 108 58.3
arahy.Tifrunner.gnm1.ann1.501GHP Arachis hypogaea HOM05D002849 ORTHO05D009472 8.4e-25 117.1 105 59.0
PGSC0003DMG400009966 Solanum tuberosum HOM05D002849 ORTHO05D009472 1.1e-24 116.7 103 58.3
GSVIVG01008706001 Vitis vinifera HOM05D000148 ORTHO05D000081 1.9e-24 115.9 110 57.3
CSS0028449 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D009472 4.2e-24 114.8 104 56.7
Sopen04g035780 Solanum pennellii HOM05D002849 ORTHO05D009472 5.4e-24 114.4 99 59.6
Phvul.009G021100 Phaseolus vulgaris HOM05D002849 ORTHO05D009472 7.1e-24 114.0 108 58.3
Lsat_1_v5_gn_8_28281 Lactuca sativa HOM05D002849 ORTHO05D009472 9.3e-24 113.6 106 56.6
Lj1g0005069 Lotus japonicus HOM05D002849 ORTHO05D009472 9.3e-24 113.6 105 57.1
ClCG05G015240 Citrullus lanatus HOM05D002849 ORTHO05D009472 1.6e-23 112.8 107 57.9
MD08G1004900 Malus domestica HOM05D002849 ORTHO05D009472 1.6e-23 112.8 109 56.9
Manes.05G140800 Manihot esculenta HOM05D002849 ORTHO05D009472 3.5e-23 111.7 99 58.6
Aqoxy5G01064 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 4.6e-23 111.3 104 60.6
TWI56G1224 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 4.6e-23 111.3 107 57.9
RcHm_v2.0_Chr6g0303941 Rosa chinensis HOM05D002849 ORTHO05D009472 6.0e-23 110.9 105 54.3
Dinv31914 Davidia involucrata HOM05D000894 ORTHO05D002325 7.9e-23 110.5 104 55.8
Aqoxy5G01070 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 1.3e-22 109.8 104 59.6
CiPaw.08G071000 Carya illinoinensis HOM05D002849 ORTHO05D009472 1.8e-22 109.4 107 55.1
Nn5g27128 Nelumbo nucifera HOM05D002849 ORTHO05D009472 1.8e-22 109.4 101 57.4
Nitab4.5_0000699g0200 Nicotiana tabacum HOM05D002849 ORTHO05D009472 2.3e-22 109.0 102 56.9
Nitab4.5_0003149g0010 Nicotiana tabacum HOM05D002849 ORTHO05D009472 2.3e-22 109.0 102 55.9
Sc26g0004580 Simmondsia chinensis HOM05D002849 ORTHO05D009472 2.3e-22 109.0 91 59.3
TWI36G1301 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 2.3e-22 109.0 107 57.0
HanXRQChr08g0215861 Helianthus annuus HOM05D002849 ORTHO05D009472 3.0e-22 108.6 104 55.8
HanXRQChr08g0215951 Helianthus annuus HOM05D002849 ORTHO05D009472 3.9e-22 108.2 104 55.8
COL.COLO4_21616 Corchorus olitorius HOM05D002849 ORTHO05D009472 5.1e-22 107.8 109 55.0
CsaV3_4G037080 Cucumis sativus L. HOM05D002849 ORTHO05D009472 5.1e-22 107.8 92 57.6
Solyc12g094480.3 Solanum lycopersicum HOM05D002849 ORTHO05D009472 5.1e-22 107.8 110 54.5
Sopen12g031370 Solanum pennellii HOM05D002849 ORTHO05D009472 5.1e-22 107.8 110 54.5
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 6.7e-22 107.5 106 56.6
Thecc.08G055000 Theobroma cacao HOM05D002849 ORTHO05D009472 6.7e-22 107.5 105 52.4
AUR62013835 Chenopodium quinoa HOM05D002849 ORTHO05D009472 1.1e-21 106.7 104 55.8
AUR62036770 Chenopodium quinoa HOM05D002849 ORTHO05D009472 1.1e-21 106.7 104 55.8
ECA233G1055 Erigeron canadensis HOM05D002849 ORTHO05D009472 1.1e-21 106.7 97 56.7
Nitab4.5_0000588g0290 Nicotiana tabacum HOM05D002849 ORTHO05D009472 1.1e-21 106.7 103 54.4
Peaxi162Scf00174g01410 Petunia axillaris HOM05D002849 ORTHO05D009472 1.1e-21 106.7 101 55.4
vmacro04390 Vaccinium macrocarpon HOM05D002849 ORTHO05D009472 1.1e-21 106.7 107 55.1
MD11G1257900 Malus domestica HOM05D002849 ORTHO05D009472 1.5e-21 106.3 106 52.8
AL1G33360 Arabidopsis lyrata HOM05D002849 ORTHO05D009472 1.9e-21 105.9 101 54.5
MELO3C017006.2 Cucumis melo HOM05D002849 ORTHO05D009472 2.5e-21 105.5 92 55.4
AT1G20430 Arabidopsis thaliana HOM05D002849 ORTHO05D009472 3.3e-21 105.1 101 54.5
PGR102G2189 Punica granatum HOM05D002849 ORTHO05D009472 3.3e-21 105.1 105 52.4
VMungo0540G0079 Vigna mungo HOM05D002849 ORTHO05D009472 3.3e-21 105.1 105 56.2
Gorai.010G000900 Gossypium raimondii HOM05D002849 ORTHO05D009472 4.3e-21 104.8 109 52.3
PGSC0003DMG400029324 Solanum tuberosum HOM05D002849 ORTHO05D009472 4.3e-21 104.8 110 54.5
CARHR020890 Cardamine hirsuta HOM05D002849 ORTHO05D009472 5.6e-21 104.4 101 53.5
Sp1g18150 Schrenkiella parvula HOM05D002849 ORTHO05D009472 5.6e-21 104.4 101 52.5
Eucgr.H01281 Eucalyptus grandis HOM05D002849 ORTHO05D009472 7.4e-21 104.0 105 56.2
Thhalv10009140m.g Eutrema salsugineum HOM05D002849 ORTHO05D009472 7.4e-21 104.0 101 54.5
Aa31LG7G4740 Aethionema arabicum HOM05D002849 ORTHO05D009472 9.6e-21 103.6 88 59.1
EL10Ac2g02687 Beta vulgaris HOM05D002849 ORTHO05D009472 9.6e-21 103.6 106 52.8
Cfa014031 Carpinus fangiana HOM05D002849 ORTHO05D009472 9.6e-21 103.6 106 53.8
Gohir.A06G000700 Gossypium hirsutum HOM05D002849 ORTHO05D009472 9.6e-21 103.6 109 51.4
Rhsim07G0252900 Rhododendron simsii HOM05D002849 ORTHO05D009472 9.6e-21 103.6 103 55.3
BcaNung03382 Brassica carinata HOM05D002849 ORTHO05D009472 1.3e-20 103.2 101 52.5
C07p23030 Brassica napus HOM05D002849 ORTHO05D009472 1.3e-20 103.2 101 52.5
BolC7t42844H Brassica oleracea HOM05D002849 ORTHO05D009472 1.3e-20 103.2 101 52.5
BcaB03g14321 Brassica carinata HOM05D002849 ORTHO05D009472 1.6e-20 102.8 101 52.5
A07p15680 Brassica napus HOM05D002849 ORTHO05D009472 1.6e-20 102.8 101 52.5
A07p15790 Brassica napus HOM05D002849 ORTHO05D009472 1.6e-20 102.8 101 52.5
BraA07t29306Z Brassica rapa HOM05D002849 ORTHO05D009472 1.6e-20 102.8 101 52.5
Carub.0005s0958 Capsella rubella HOM05D002849 ORTHO05D009472 2.1e-20 102.4 114 50.0
Atru.chr13.177 Acer truncatum HOM05D002849 ORTHO05D009472 2.8e-20 102.1 108 54.6
Actinidia37963 Actinidia chinensis HOM05D002849 ORTHO05D009472 3.7e-20 101.7 92 57.6
Duzib093G0992 Durio zibethinus HOM05D002849 ORTHO05D009472 3.7e-20 101.7 109 51.4
Cc10_g00900 Coffea canephora HOM05D002849 ORTHO05D009472 8.1e-20 100.5 103 51.5
Carub.0001s1990 Capsella rubella HOM05D002849 ORTHO05D009472 1.1e-19 100.1 101 51.5
SGA_v2.0_scaffold275G46557 Striga asiatica HOM05D002849 ORTHO05D009472 3.1e-19 98.6 105 50.5
unitig_82.g27114 Utricularia gibba HOM05D002849 ORTHO05D009472 3.1e-19 98.6 103 51.5
Sp5g31300 Schrenkiella parvula HOM05D002849 ORTHO05D009472 4.0e-19 98.2 105 50.5
DCAR_016751 Daucus carota HOM05D002849 ORTHO05D009472 5.3e-19 97.8 105 48.6
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 9.0e-19 97.1 103 49.5
FAN20G1236 Fragaria x ananassa HOM05D002849 ORTHO05D009472 1.2e-18 96.7 107 51.4
Actinidia29779 Actinidia chinensis HOM05D002849 ORTHO05D009472 1.5e-18 96.3 81 59.3
Migut.C00918 Erythranthe guttata HOM05D002849 ORTHO05D009472 2.6e-18 95.5 105 50.5
BcaB07g32046 Brassica carinata HOM05D002849 ORTHO05D009472 3.4e-18 95.1 101 49.5
ATR0661G222 Amborella trichopoda HOM05D002849 ORTHO05D009472 4.5e-18 94.7 88 51.1
Lalb_Chr01g0008401 Lupinus albus HOM05D002849 ORTHO05D009472 1.3e-17 93.2 93 53.8
THA.LOC104811451 Tarenaya hassleriana HOM05D002849 ORTHO05D009472 1.7e-17 92.8 84 59.5
SHI08004 Sapria himalayana HOM05D002849 ORTHO05D009472 3.2e-16 88.6 88 50.0
SalBow7G2120 Salvia bowleyana HOM05D002849 ORTHO05D009472 1.5e-13 79.7 87 46.0
arahy.Tifrunner.gnm1.ann1.H4T2PX Arachis hypogaea HOM05D002849 ORTHO05D009472 1.5e-10 69.7 73 50.7
arahy.Tifrunner.gnm1.ann1.PLB5QN Arachis hypogaea HOM05D003604 ORTHO05D004110 1.5e-10 69.7 73 50.7
Os06g0213900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D009472 1.3e-09 66.6 89 38.2
Zm00001eb373140 Zea mays HOM05D002849 ORTHO05D009472 2.9e-09 65.5 84 38.1
SEGI_39053 Sequoiadendron giganteum HOM05D002849 ORTHO05D009472 3.8e-09 65.1 90 42.2


User provided reference genes

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