Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0061401 Lupinus albus HOM05D001775 ORTHO05D006205 9.3e-95 350.1 168 100.0
Ca_15392_v3 Cicer arietinum L. HOM05D001775 ORTHO05D006205 6.0e-78 294.3 168 81.0
Phvul.009G007300 Phaseolus vulgaris HOM05D001775 ORTHO05D006205 1.1e-76 290.0 168 79.8
Glyma.06G015300 Glycine max HOM05D001775 ORTHO05D006205 7.4e-76 287.3 168 80.4
arahy.Tifrunner.gnm1.ann1.62LGBX Arachis hypogaea HOM05D001775 ORTHO05D006205 1.6e-75 286.2 168 78.0
arahy.Tifrunner.gnm1.ann1.NA36AX Arachis hypogaea HOM05D001775 ORTHO05D006205 1.4e-74 283.1 168 77.4
TPR.G38180 Trifolium pratense HOM05D001775 ORTHO05D006205 5.8e-73 277.7 179 75.4
Ciclev10002700m.g Citrus clementina HOM05D001775 ORTHO05D006205 7.4e-68 260.8 168 72.0
CiPaw.07G134900 Carya illinoinensis HOM05D001775 ORTHO05D006205 3.7e-67 258.5 168 69.6
Eucgr.F01803 Eucalyptus grandis HOM05D001775 ORTHO05D006205 4.8e-67 258.1 168 69.6
GSVIVG01013411001 Vitis vinifera HOM05D001775 ORTHO05D006205 2.4e-66 255.8 168 69.0
CSS0024195 Camellia sinensis var. sinensis HOM05D001775 ORTHO05D006205 3.1e-66 255.4 168 69.0
Medtr3g115990 Medicago truncatula HOM05D001775 ORTHO05D006205 4.1e-66 255.0 205 62.9
MD06G1005500 Malus domestica HOM05D001775 ORTHO05D006205 2.0e-65 252.7 168 67.3
QL02p015365 Quercus lobata HOM05D001775 ORTHO05D006205 2.0e-65 252.7 167 68.3
QL02p015396 Quercus lobata HOM05D001775 ORTHO05D006205 2.0e-65 252.7 167 68.3
FAN08G0076 Fragaria x ananassa HOM05D001775 ORTHO05D006205 7.6e-65 250.8 168 66.1
FAN04G1208 Fragaria x ananassa HOM05D001775 ORTHO05D006205 1.0e-64 250.4 168 66.1
FvH4_5g25920 Fragaria vesca HOM05D001775 ORTHO05D006205 1.7e-64 249.6 168 65.5
FAN13G2435 Fragaria x ananassa HOM05D001775 ORTHO05D006205 1.7e-64 249.6 168 65.5
Hund05085 Selenicereus undatus HOM05D001775 ORTHO05D006205 1.7e-64 249.6 168 66.1
Actinidia15517 Actinidia chinensis HOM05D001775 ORTHO05D006205 3.8e-64 248.4 167 66.5
Cfa014124 Carpinus fangiana HOM05D001775 ORTHO05D006205 3.8e-64 248.4 168 66.7
Manes.18G002900 Manihot esculenta HOM05D001775 ORTHO05D006205 6.5e-64 247.7 168 67.9
Hma1.2p1_0612F.1_g189000 Hydrangea macrophylla HOM05D001775 ORTHO05D006205 1.4e-63 246.5 169 67.5
Prupe.5G006800 Prunus persica HOM05D001775 ORTHO05D006205 2.5e-63 245.7 163 66.9
RcHm_v2.0_Chr7g0216421 Rosa chinensis HOM05D001775 ORTHO05D006205 3.2e-63 245.4 168 65.5
Cc10_g00340 Coffea canephora HOM05D001775 ORTHO05D006205 7.2e-63 244.2 168 64.9
Oeu016871.1 Olea europaea HOM05D001775 ORTHO05D006205 9.3e-63 243.8 170 65.9
Cpa.g.sc26.151 Carica papaya HOM05D001775 ORTHO05D006205 1.6e-62 243.0 170 66.5
Oeu019572.1 Olea europaea HOM05D001775 ORTHO05D006205 2.1e-62 242.7 170 64.7
TWI12G0153 Tripterygium wilfordii HOM05D001775 ORTHO05D006205 3.5e-62 241.9 168 64.3
Potri.005G255100 Populus trichocarpa HOM05D001775 ORTHO05D006205 7.9e-62 240.7 168 65.5
Thecc.08G064000 Theobroma cacao HOM05D001775 ORTHO05D006205 1.0e-61 240.4 168 66.7
Haze_22846 Corylus avellana HOM05D001775 ORTHO05D006205 2.3e-61 239.2 172 65.7
DCAR_016792 Daucus carota HOM05D001775 ORTHO05D006205 2.3e-61 239.2 168 64.9
EL10Ac1g01895 Beta vulgaris HOM05D001775 ORTHO05D006205 8.7e-61 237.3 170 62.4
AUR62024107 Chenopodium quinoa HOM05D001775 ORTHO05D006205 1.5e-60 236.5 170 61.8
AUR62035157 Chenopodium quinoa HOM05D001775 ORTHO05D006205 1.5e-60 236.5 170 61.8
PSO675G2258 Papaver somniferum HOM05D001775 ORTHO05D006205 3.3e-60 235.3 168 61.3
Gohir.A05G177800 Gossypium hirsutum HOM05D001775 ORTHO05D006205 4.3e-60 235.0 168 64.9
Gorai.009G186200 Gossypium raimondii HOM05D001775 ORTHO05D006205 5.7e-60 234.6 168 64.3
Gohir.D05G181200 Gossypium hirsutum HOM05D001775 ORTHO05D006205 1.3e-59 233.4 168 64.3
PSO541G5829 Papaver somniferum HOM05D001775 ORTHO05D006205 1.3e-59 233.4 168 60.1
Hund01795 Selenicereus undatus HOM05D001775 ORTHO05D006205 2.8e-59 232.3 168 61.3
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 1.1e-58 230.3 152 68.4
Sabra05G0197600 Salix brachista HOM05D001775 ORTHO05D006205 1.8e-58 229.6 168 64.3
ClCG08G009240 Citrullus lanatus HOM05D001775 ORTHO05D006205 4.1e-58 228.4 168 60.7
Carub.0001s2027 Capsella rubella HOM05D001775 ORTHO05D006205 6.9e-58 227.6 168 60.7
Sed0015170 Sechium edule HOM05D001775 ORTHO05D006205 5.9e-57 224.6 168 60.7
C06p50600 Brassica napus HOM05D001775 ORTHO05D006205 1.0e-56 223.8 168 57.7
CARHR021240 Cardamine hirsuta HOM05D001775 ORTHO05D006205 1.0e-56 223.8 168 60.7
MBI08_g29079_MAGBIO Magnolia biondii HOM05D001775 ORTHO05D006205 1.3e-56 223.4 170 61.2
AL1G33820 Arabidopsis lyrata HOM05D001775 ORTHO05D006205 2.2e-56 222.6 168 60.7
AL2G36510 Arabidopsis lyrata HOM05D001775 ORTHO05D006205 2.2e-56 222.6 168 57.7
BcaC08g47254 Brassica carinata HOM05D001775 ORTHO05D006205 3.8e-56 221.9 168 57.1
A07p42030 Brassica napus HOM05D001775 ORTHO05D006205 3.8e-56 221.9 168 57.1
BolC6t40085H Brassica oleracea HOM05D001775 ORTHO05D006205 3.8e-56 221.9 168 57.1
BraA07t31733Z Brassica rapa HOM05D001775 ORTHO05D006205 3.8e-56 221.9 168 57.1
Sp1g18510 Schrenkiella parvula HOM05D001775 ORTHO05D006205 5.0e-56 221.5 168 59.5
TAR628G0191 Trochodendron aralioides HOM05D001775 ORTHO05D006205 6.5e-56 221.1 168 61.3
AT1G20816 Arabidopsis thaliana HOM05D001775 ORTHO05D006205 8.5e-56 220.7 168 59.5
AT1G76405 Arabidopsis thaliana HOM05D001775 ORTHO05D006205 1.1e-55 220.3 168 56.0
Thhalv10008937m.g Eutrema salsugineum HOM05D001775 ORTHO05D006205 3.2e-55 218.8 168 59.5
BcaC08g47138 Brassica carinata HOM05D001775 ORTHO05D006205 4.2e-55 218.4 168 56.5
CARHR069960 Cardamine hirsuta HOM05D001775 ORTHO05D006205 5.5e-55 218.0 168 56.5
THA.LOC104813743 Tarenaya hassleriana HOM05D001775 ORTHO05D006205 7.2e-55 217.6 168 59.5
Thhalv10019232m.g Eutrema salsugineum HOM05D001775 ORTHO05D006205 9.4e-55 217.2 168 57.7
Aa31LG4G6480 Aethionema arabicum HOM05D001775 ORTHO05D006205 1.2e-54 216.9 173 57.2
Sp5g31560 Schrenkiella parvula HOM05D001775 ORTHO05D006205 1.2e-54 216.9 168 57.1
SGA_v2.0_scaffold133G34600 Striga asiatica HOM05D001775 ORTHO05D006205 1.2e-54 216.9 169 59.2
Carub.0002s2331 Capsella rubella HOM05D001775 ORTHO05D006205 6.1e-54 214.5 168 55.4
CsaV3_6G031380 Cucumis sativus L. HOM05D001775 ORTHO05D006205 1.4e-53 213.4 168 57.1
HanXRQChr05g0144711 Helianthus annuus HOM05D001775 ORTHO05D006205 1.4e-53 213.4 196 52.6
HanXRQChr14g0427901 Helianthus annuus HOM05D001775 ORTHO05D006205 1.8e-53 213.0 188 54.3
Psat5g008840 Pisum sativum HOM05D001775 ORTHO05D006205 3.9e-53 211.8 151 68.9
SalBow7G0166 Salvia bowleyana HOM05D001775 ORTHO05D006205 3.9e-53 211.8 168 56.0
MSTRG.24916 Avicennia marina HOM05D001775 ORTHO05D006205 8.8e-53 210.7 168 55.4
BraA07t30489Z Brassica rapa HOM05D001775 ORTHO05D006205 8.8e-53 210.7 169 56.8
BcaB07g32074 Brassica carinata HOM05D001775 ORTHO05D006205 1.1e-52 210.3 168 56.0
A07p28510 Brassica napus HOM05D001775 ORTHO05D006205 1.1e-52 210.3 169 56.8
Ah.00g001090 Amaranthus hybridus HOM05D001775 ORTHO05D006205 2.0e-52 209.5 172 58.1
Lsat_1_v5_gn_2_1320 Lactuca sativa HOM05D001775 ORTHO05D006205 2.5e-52 209.1 165 56.4
vmacro21778 Vaccinium macrocarpon HOM05D001775 ORTHO05D006205 5.7e-52 208.0 205 49.8
A06p16800 Brassica napus HOM05D001775 ORTHO05D009111 7.4e-52 207.6 168 56.5
BcaC08g45531 Brassica carinata HOM05D001775 ORTHO05D006205 9.7e-52 207.2 168 54.8
C06p32060 Brassica napus HOM05D001775 ORTHO05D006205 9.7e-52 207.2 168 54.8
BolC6t38332H Brassica oleracea HOM05D001775 ORTHO05D006205 9.7e-52 207.2 168 54.8
BraA06t24788Z Brassica rapa HOM05D001775 ORTHO05D006205 1.3e-51 206.8 168 56.5
C05p19360 Brassica napus HOM05D001775 ORTHO05D009111 1.7e-51 206.5 168 56.5
BolC5t30639H Brassica oleracea HOM05D001775 ORTHO05D006205 1.7e-51 206.5 168 56.5
Migut.C00377 Erythranthe guttata HOM05D001775 ORTHO05D006205 1.7e-51 206.5 168 57.1
THA.LOC104811999 Tarenaya hassleriana HOM05D001775 ORTHO05D006205 1.7e-51 206.5 168 55.4
BcaC05g25983 Brassica carinata HOM05D001775 ORTHO05D006205 2.2e-51 206.1 168 56.0
Atru.chr13.81 Acer truncatum HOM05D001775 ORTHO05D006205 3.7e-51 205.3 141 66.0
BcaB02g07061 Brassica carinata HOM05D001775 ORTHO05D006205 4.8e-51 204.9 169 55.0
TWI56G1014 Tripterygium wilfordii HOM05D001775 ORTHO05D006205 4.8e-51 204.9 201 50.2
HanXRQChr15g0492581 Helianthus annuus HOM05D001775 ORTHO05D006205 1.1e-50 203.8 189 50.8
PGR083G1854 Punica granatum HOM05D001775 ORTHO05D006205 5.3e-50 201.4 184 54.3
ECA232G0408 Erigeron canadensis HOM05D000593 ORTHO05D006205 6.9e-50 201.1 155 58.1
ECA238G0508 Erigeron canadensis HOM05D001775 ORTHO05D006205 2.0e-49 199.5 190 51.6
Lsat_1_v5_gn_9_41801 Lactuca sativa HOM05D001775 ORTHO05D006205 1.0e-48 197.2 182 49.5
Rhsim06G0004200 Rhododendron simsii HOM05D001775 ORTHO05D006205 1.0e-48 197.2 237 45.6
MELO3C026523.2 Cucumis melo HOM05D001775 ORTHO05D006205 1.3e-48 196.8 193 49.7
HPP92_015233 Vanilla planifolia HOM05D001775 ORTHO05D006205 2.2e-48 196.1 168 51.2
CAN.G1330.2 Capsicum annuum HOM05D001775 ORTHO05D006205 1.1e-47 193.7 168 52.4
Peaxi162Scf00680g00415 Petunia axillaris HOM05D001775 ORTHO05D006205 1.1e-47 193.7 168 53.6
Manes.05G125900 Manihot esculenta HOM05D001775 ORTHO05D006205 9.4e-47 190.7 137 63.5
Nitab4.5_0001756g0150 Nicotiana tabacum HOM05D001775 ORTHO05D006205 1.6e-46 189.9 169 53.8
Nitab4.5_0029491g0010 Nicotiana tabacum HOM05D001775 ORTHO05D006205 1.6e-46 189.9 169 53.8
COL.COLO4_36626 Corchorus olitorius HOM05D001775 ORTHO05D006205 6.7e-45 184.5 140 62.9
PGSC0003DMG400009918 Solanum tuberosum HOM05D001775 ORTHO05D006205 1.1e-44 183.7 168 50.6
Solyc04g082680.3 Solanum lycopersicum HOM05D001775 ORTHO05D006205 1.5e-44 183.3 168 50.6
Sopen04g036310 Solanum pennellii HOM05D001775 ORTHO05D006205 1.5e-44 183.3 168 50.6
Dinv31976 Davidia involucrata HOM05D001775 ORTHO05D000295 5.7e-44 181.4 167 54.5
Duzib116G0384 Durio zibethinus HOM05D001775 ORTHO05D006205 2.2e-43 179.5 168 54.2
unitig_0.g2075 Utricularia gibba HOM05D001775 ORTHO05D006205 6.3e-43 177.9 190 47.4
ATR0807G198 Amborella trichopoda HOM05D001775 ORTHO05D006205 8.2e-43 177.6 169 51.5
FAN18G0260 Fragaria x ananassa HOM05D001775 ORTHO05D006205 7.0e-42 174.5 122 60.7
CANSAT25G3735 Cannabis sativa HOM05D001775 ORTHO05D006205 8.8e-37 157.5 104 64.4
CDE05G0488 Ceratophyllum demersum HOM05D001775 ORTHO05D006205 2.0e-36 156.4 145 48.3
CDE05G0091 Ceratophyllum demersum HOM05D001775 ORTHO05D006205 4.4e-36 155.2 173 45.1
Os02g0832200 Oryza sativa ssp. japonica HOM05D001775 ORTHO05D006205 7.5e-36 154.5 186 44.1
Duzib041G0706 Durio zibethinus HOM05D001775 ORTHO05D006205 1.7e-35 153.3 168 47.0
arahy.Tifrunner.gnm1.ann1.5GY58N Arachis hypogaea HOM05D001775 ORTHO05D006205 3.7e-35 152.1 97 73.2
Lj4A6T36 Lonicera japonica HOM05D001775 ORTHO05D006205 6.3e-35 151.4 111 58.6
Nn5g31022 Nelumbo nucifera HOM05D001775 ORTHO05D006205 6.3e-35 151.4 168 48.2
arahy.Tifrunner.gnm1.ann1.3KDH9X Arachis hypogaea HOM05D001775 ORTHO05D006205 8.2e-35 151.0 97 71.1
Pp3c16_8850 Physcomitrium patens HOM05D001775 ORTHO05D006205 1.4e-34 150.2 169 44.4
VMungo1309G1483 Vigna mungo HOM05D001775 ORTHO05D006205 4.5e-33 145.2 162 50.0
Mapoly0001s0026 Marchantia polymorpha HOM05D001775 ORTHO05D006205 5.9e-33 144.8 169 43.2
Zm00001eb259570 Zea mays HOM05D001775 ORTHO05D006205 8.5e-32 141.0 174 40.8
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 7.2e-31 137.9 126 54.8
MCO07G511 Micromonas commoda HOM05D001775 ORTHO05D006205 2.7e-30 136.0 171 41.5
PRCOL_00001546 Prasinoderma coloniale HOM05D001775 ORTHO05D006205 5.9e-25 118.2 169 35.5
arahy.Tifrunner.gnm1.ann1.S8I99S Arachis hypogaea HOM05D001775 ORTHO05D006205 2.5e-23 112.8 86 66.3
AagrBONN_evm.TU.Sc2ySwM_344.4857 Anthoceros agrestis HOM05D001775 ORTHO05D006205 4.7e-22 108.6 142 39.4
HPP92_015234 Vanilla planifolia HOM05D001775 ORTHO05D006205 8.0e-22 107.8 107 46.7
SMO117G0070 Selaginella moellendorffii HOM05D001775 ORTHO05D006205 1.8e-21 106.7 184 37.5
AagrBONN_evm.TU.Sc2ySwM_362.1823 Anthoceros agrestis HOM05D001775 ORTHO05D006205 8.8e-21 104.4 171 34.5
SMO114G0103 Selaginella moellendorffii HOM05D001775 ORTHO05D006205 2.0e-20 103.2 163 39.3
CBR_g44541 Chara braunii HOM05D001775 ORTHO05D006205 4.4e-20 102.1 169 33.7
arahy.Tifrunner.gnm1.ann1.FUJ1Q4 Arachis hypogaea HOM05D001795 ORTHO05D006205 7.5e-20 101.3 69 66.7
Pp3c5_19490 Physcomitrium patens HOM05D001775 ORTHO05D006205 1.1e-15 87.4 92 44.6
Nitab4.5_0005347g0040 Nicotiana tabacum HOM05D001775 ORTHO05D006205 1.5e-12 77.0 51 56.9
Sc15g0004100 Simmondsia chinensis HOM05D001775 ORTHO05D006205 9.5e-07 57.8 141 29.1


User provided reference genes

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