Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 7.8e-138 493.8 254 100.0
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 1.4e-123 446.4 249 88.4
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 2.1e-122 442.6 259 87.6
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 2.3e-121 439.1 248 87.1
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 2.3e-121 439.1 243 88.9
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 1.1e-120 436.8 254 85.8
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 2.1e-119 432.6 249 85.5
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 1.1e-118 430.3 247 87.0
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 1.5e-117 426.4 248 85.1
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 7.6e-117 424.1 235 89.8
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 2.7e-114 415.6 248 82.7
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 2.7e-114 415.6 248 82.7
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 2.4e-110 402.5 243 80.2
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 5.3e-110 401.4 254 78.7
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 9.0e-110 400.6 248 79.8
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 7.6e-109 397.5 252 78.2
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 1.7e-108 396.4 248 77.8
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 5.0e-108 394.8 247 77.7
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 2.5e-107 392.5 254 76.4
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 3.2e-107 392.1 246 78.0
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 3.2e-107 392.1 243 77.4
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 5.5e-107 391.3 243 77.8
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 1.2e-106 390.2 243 78.2
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 2.1e-106 389.4 251 76.5
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 2.1e-106 389.4 250 76.8
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 3.5e-106 388.7 243 77.0
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 3.5e-106 388.7 243 77.8
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 3.5e-106 388.7 254 78.3
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 4.6e-106 388.3 243 77.4
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 6.1e-106 387.9 243 78.2
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 7.9e-106 387.5 243 77.0
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 1.3e-105 386.7 243 78.2
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 1.3e-105 386.7 254 74.0
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 2.3e-105 386.0 253 75.9
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.3e-105 386.0 253 75.1
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 3.0e-105 385.6 246 75.6
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 3.9e-105 385.2 252 75.4
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 6.7e-105 384.4 246 76.0
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 3.3e-104 382.1 253 76.3
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 4.3e-104 381.7 243 75.7
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 7.4e-104 380.9 269 71.7
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 7.4e-104 380.9 248 75.0
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 9.7e-104 380.6 243 76.5
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 1.3e-103 380.2 243 75.3
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 2.2e-103 379.4 243 76.5
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 4.8e-103 378.3 243 75.7
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 6.3e-103 377.9 230 77.8
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 6.3e-103 377.9 243 75.7
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 8.2e-103 377.5 243 75.3
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 1.1e-102 377.1 280 69.3
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 1.1e-102 377.1 229 78.6
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 1.1e-102 377.1 243 74.5
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 4.1e-102 375.2 243 75.3
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 4.1e-102 375.2 253 71.9
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 6.9e-102 374.4 257 71.6
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 6.9e-102 374.4 254 71.3
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 9.0e-102 374.0 244 72.1
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 1.2e-101 373.6 266 71.1
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 1.2e-101 373.6 272 71.0
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 2.0e-101 372.9 251 69.7
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 3.4e-101 372.1 251 71.7
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 4.5e-101 371.7 253 71.5
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 5.9e-101 371.3 247 72.9
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 1.7e-100 369.8 232 77.6
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.2e-100 369.4 255 72.9
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 2.2e-100 369.4 253 70.8
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.9e-100 369.0 255 72.9
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 5.0e-100 368.2 235 76.6
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 5.0e-100 368.2 253 71.1
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 6.5e-100 367.9 260 71.9
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 3.2e-99 365.5 246 72.0
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 7.2e-99 364.4 243 72.0
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 7.2e-99 364.4 232 76.7
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 4.6e-98 361.7 254 70.5
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 1.0e-97 360.5 263 68.4
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 1.4e-97 360.1 251 68.1
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 6.7e-97 357.8 237 73.8
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 8.8e-97 357.5 213 80.3
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 1.1e-96 357.1 234 73.5
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 2.0e-96 356.3 253 68.4
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 2.5e-96 355.9 243 70.4
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 5.7e-96 354.8 243 68.7
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 5.7e-96 354.8 246 71.5
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 2.8e-95 352.4 243 67.9
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 6.3e-95 351.3 246 71.1
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 8.2e-95 350.9 251 65.7
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 1.1e-94 350.5 234 71.8
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 1.1e-94 350.5 245 69.0
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.8e-94 349.7 243 71.2
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 2.4e-94 349.4 251 65.7
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 3.1e-94 349.0 249 67.1
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 3.1e-94 349.0 246 71.1
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 6.9e-94 347.8 243 67.9
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 6.9e-94 347.8 243 68.3
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 9.1e-94 347.4 243 68.3
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 9.1e-94 347.4 223 76.7
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 4.5e-93 345.1 283 61.1
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 1.3e-92 343.6 213 77.5
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 2.2e-92 342.8 250 66.4
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 2.9e-92 342.4 249 65.5
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 8.5e-92 340.9 243 70.8
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 1.4e-91 340.1 243 65.8
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 1.9e-91 339.7 263 63.5
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 2.5e-91 339.3 250 65.6
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 3.2e-91 339.0 313 58.8
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 5.5e-91 338.2 248 63.7
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 7.2e-91 337.8 243 67.5
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 7.2e-91 337.8 243 67.5
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 7.2e-91 337.8 250 65.2
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 7.2e-91 337.8 256 64.8
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 1.2e-90 337.0 250 66.4
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 3.6e-90 335.5 250 64.8
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 3.6e-90 335.5 243 67.1
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 7.9e-90 334.3 243 65.8
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 7.9e-90 334.3 245 67.3
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 1.8e-89 333.2 243 68.7
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 1.5e-88 330.1 227 71.4
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 2.0e-88 329.7 254 66.5
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 4.4e-88 328.6 213 72.3
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 1.7e-87 326.6 212 73.6
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 2.2e-87 326.2 213 71.8
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 3.7e-87 325.5 252 63.1
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 8.2e-87 324.3 249 63.5
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.9e-84 315.8 243 65.8
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 5.5e-83 311.6 243 62.1
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 8.0e-82 307.8 245 65.3
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 4.0e-81 305.4 252 63.5
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 2.0e-80 303.1 251 62.2
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 7.5e-80 301.2 239 60.7
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 8.2e-79 297.7 305 53.1
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 1.4e-78 297.0 204 68.6
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 4.1e-78 295.4 206 68.9
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.0e-77 293.1 245 59.6
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 7.7e-77 291.2 248 60.5
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 2.2e-76 289.7 182 75.8
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 3.8e-76 288.9 243 59.7
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 4.7e-74 282.0 184 75.0
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 4.7e-74 282.0 245 57.1
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 3.0e-73 279.3 196 74.0
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 1.7e-71 273.5 234 58.5
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 1.1e-67 260.8 182 65.9
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 1.5e-67 260.4 252 51.6
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 3.2e-67 259.2 242 53.7
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 2.6e-64 249.6 184 65.2
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 1.3e-63 247.3 243 56.4
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 2.4e-62 243.0 243 49.8
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 2.9e-60 236.1 142 78.2
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 2.8e-58 229.6 147 76.9
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.0e-57 227.6 207 60.4
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.6e-53 213.8 194 58.2
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 2.7e-53 213.0 243 46.9
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 1.1e-51 207.6 234 45.7
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.6e-45 187.2 166 59.6
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.5e-43 179.9 104 77.9
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 2.1e-42 176.8 122 73.8
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 5.1e-36 155.6 105 72.4
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 1.1e-35 154.5 120 67.5
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 8.1e-34 148.3 148 54.7
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 4.1e-30 136.0 242 38.0
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 3.0e-28 129.8 118 58.5
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 3.0e-28 129.8 118 58.5
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 6.6e-28 128.6 82 78.0
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 1.2e-26 124.4 160 44.4
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 6.2e-26 122.1 82 75.6
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 2.2e-23 113.6 66 78.8
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 7.1e-22 108.6 66 71.2
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 3.3e-19 99.8 157 43.3
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 6.9e-17 92.0 82 58.5
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 4.5e-16 89.4 64 70.3
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 9.9e-16 88.2 85 56.5
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 1.2e-13 81.3 100 44.0
Rhsim11G0185500 Rhododendron simsii HOM05D004157 ORTHO05D004860 6.9e-09 65.5 47 53.2
Ca_29445_v3 Cicer arietinum L. HOM05D004157 ORTHO05D148328 2.2e-07 60.5 185 27.0
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 4.9e-07 59.3 123 37.4
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 6.4e-07 58.9 50 64.0
Medtr1g094635 Medicago truncatula HOM05D004157 ORTHO05D004860 1.1e-06 58.2 40 67.5


User provided reference genes

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