Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0061201 Lupinus albus HOM05D005992 ORTHO05D007476 2.9e-83 312.0 177 100.0
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 4.6e-60 235.0 144 82.6
Lj1g0017920 Lotus japonicus HOM05D005992 ORTHO05D007476 8.1e-57 224.2 145 80.0
Ca_15291_v3 Cicer arietinum L. HOM05D005992 ORTHO05D007476 1.7e-54 216.5 168 69.0
Medtr3g118100 Medicago truncatula HOM05D005992 ORTHO05D007476 2.2e-54 216.1 146 76.0
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 3.6e-49 198.7 152 71.1
Glyma.04G002700 Glycine max HOM05D005992 ORTHO05D007476 1.1e-48 197.2 144 72.2
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 8.9e-48 194.1 126 77.8
Phvul.009G118300 Phaseolus vulgaris HOM05D005992 ORTHO05D007476 5.8e-47 191.4 146 69.9
Glyma.06G002700 Glycine max HOM05D005992 ORTHO05D007476 2.2e-46 189.5 144 68.8
VMungo1309G0397 Vigna mungo HOM05D005992 ORTHO05D007476 1.2e-44 183.7 147 66.7
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 5.6e-42 174.9 145 66.9
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 2.1e-36 156.4 144 56.9
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 1.5e-34 150.2 145 55.9
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 4.8e-33 145.2 144 54.9
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 6.2e-33 144.8 144 54.9
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 6.2e-33 144.8 144 55.6
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 6.2e-33 144.8 144 55.6
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 2.4e-32 142.9 146 57.5
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 2.4e-32 142.9 144 54.2
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 2.0e-31 139.8 145 52.4
Potri.014G172600 Populus trichocarpa HOM05D005992 ORTHO05D007476 2.0e-31 139.8 156 56.4
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 7.6e-31 137.9 149 54.4
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.3e-30 137.1 152 53.3
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.3e-30 137.1 152 53.3
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 1.7e-30 136.7 178 48.9
GSVIVG01004128001 Vitis vinifera HOM05D005992 ORTHO05D007476 4.9e-30 135.2 148 54.7
QL09p044779 Quercus lobata HOM05D005992 ORTHO05D007476 2.4e-29 132.9 147 54.4
Peaxi162Scf00390g00125 Petunia axillaris HOM05D005992 ORTHO05D007476 7.1e-29 131.3 142 54.9
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.6e-28 130.2 147 52.4
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 3.5e-28 129.0 144 54.2
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 6.0e-28 128.3 147 52.4
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 7.9e-28 127.9 147 49.0
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 7.9e-28 127.9 147 51.7
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 1.0e-27 127.5 147 50.3
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 3.0e-27 125.9 148 50.0
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 5.1e-27 125.2 149 51.7
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 5.1e-27 125.2 150 52.0
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 5.1e-27 125.2 146 51.4
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 8.7e-27 124.4 150 52.7
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 1.9e-26 123.2 148 51.4
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 3.3e-26 122.5 150 51.3
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 3.3e-26 122.5 150 51.3
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 7.4e-26 121.3 146 53.4
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 2.1e-25 119.8 147 50.3
Nitab4.5_0008751g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 2.1e-25 119.8 142 50.7
Oeu058218.1 Olea europaea HOM05D005992 ORTHO05D007476 6.2e-25 118.2 147 47.6
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 6.2e-25 118.2 150 50.0
Ciclev10016954m.g Citrus clementina HOM05D005992 ORTHO05D007476 8.1e-25 117.9 147 51.0
Nitab4.5_0001348g0200 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.1e-24 117.5 142 50.0
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 1.4e-24 117.1 152 50.0
Cc01_g15730 Coffea canephora HOM05D005992 ORTHO05D007476 1.8e-24 116.7 142 50.0
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 4.0e-24 115.5 143 47.6
Nitab4.5_0009028g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 4.0e-24 115.5 142 50.7
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 6.9e-24 114.8 147 48.3
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 9.0e-24 114.4 147 46.3
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 1.5e-23 113.6 144 50.7
THA.LOC104822452 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 2.0e-23 113.2 144 47.9
Solyc06g082830.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 2.6e-23 112.8 141 49.6
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 3.4e-23 112.5 150 48.0
Nitab4.5_0005967g0050 Nicotiana tabacum HOM05D005992 ORTHO05D007476 3.4e-23 112.5 142 49.3
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 5.8e-23 111.7 146 46.6
PGSC0003DMG400027679 Solanum tuberosum HOM05D005992 ORTHO05D007476 1.0e-22 110.9 142 50.0
Migut.D00757 Erythranthe guttata HOM05D005992 ORTHO05D007476 1.7e-22 110.2 147 44.9
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 2.2e-22 109.8 147 44.2
Sopen06g034190 Solanum pennellii HOM05D005992 ORTHO05D007476 2.9e-22 109.4 142 49.3
SGA_v2.0_scaffold8G04484 Striga asiatica HOM05D005992 ORTHO05D007476 2.5e-21 106.3 146 45.2
CDE07G1966 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 3.2e-21 105.9 146 45.2
MSTRG.18519 Avicennia marina HOM05D005992 ORTHO05D007476 5.5e-21 105.1 134 46.3
MBI07_g44661_MAGBIO Magnolia biondii HOM05D005992 ORTHO05D007476 5.5e-21 105.1 143 44.8
SalBow6G0883 Salvia bowleyana HOM05D005992 ORTHO05D007476 5.5e-21 105.1 160 43.1
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 7.1e-21 104.8 112 51.8
CDE04G1688 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 2.7e-20 102.8 146 43.2
CAN.G874.50 Capsicum annuum HOM05D005992 ORTHO05D007476 3.5e-20 102.4 142 47.2
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 4.6e-20 102.1 110 53.6
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 1.0e-19 100.9 182 40.7
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 1.0e-19 100.9 126 45.2
HPP92_004514 Vanilla planifolia HOM05D005992 ORTHO05D007476 1.0e-19 100.9 123 46.3
Sabra14G0132200 Salix brachista HOM05D005992 ORTHO05D007476 3.9e-19 99.0 196 38.8
TWI18G0378 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 3.9e-19 99.0 121 48.8
THA.LOC104819021 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 1.9e-18 96.7 144 45.8
Zm00001eb246760 Zea mays HOM05D005992 ORTHO05D007476 2.5e-18 96.3 115 49.6
EL10Ac9g23025 Beta vulgaris HOM05D005992 ORTHO05D007476 3.3e-18 95.9 123 48.0
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 1.3e-17 94.0 195 35.4
SalBow2G0316 Salvia bowleyana HOM05D005992 ORTHO05D007476 2.1e-17 93.2 190 35.8
Aqoxy2G04184 Aquilegia oxysepala HOM05D001906 ORTHO05D002083 4.8e-17 92.0 134 46.3
TAR362G0776 Trochodendron aralioides HOM05D005992 ORTHO05D007476 1.1e-16 90.9 84 58.3
unitig_60.g25570 Utricularia gibba HOM05D005992 ORTHO05D007476 2.4e-16 89.7 150 40.7
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 3.1e-16 89.4 127 42.5
PSO357G0365 Papaver somniferum HOM05D005992 ORTHO05D007476 3.1e-16 89.4 149 44.3
Os02g0609400 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 6.9e-16 88.2 125 44.0
PSO170G4201 Papaver somniferum HOM05D005992 ORTHO05D007476 9.0e-16 87.8 149 43.6
CARHR183920 Cardamine hirsuta HOM05D005992 ORTHO05D007476 7.2e-13 78.2 133 40.6
ATR0743G072 Amborella trichopoda HOM05D005992 ORTHO05D007476 2.1e-12 76.6 129 39.5
Oeu064700.1 Olea europaea HOM05D005992 ORTHO05D007476 6.1e-12 75.1 99 45.5
AT5G48335 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 7.9e-12 74.7 119 42.0
Sopen09g012660 Solanum pennellii HOM05D005992 ORTHO05D007476 1.0e-11 74.3 73 52.1
AL8G21060 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 1.8e-11 73.6 119 42.0
BraA05t22792Z Brassica rapa HOM05D005992 ORTHO05D007476 3.9e-11 72.4 144 38.2
Thhalv10021713m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 3.9e-11 72.4 133 39.1
Sp3g06520 Schrenkiella parvula HOM05D005992 ORTHO05D007476 4.3e-10 68.9 134 38.8
Os02g0599500 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 7.4e-10 68.2 95 43.2
C05p59720 Brassica napus HOM05D005992 ORTHO05D007476 1.4e-08 63.9 133 37.6
BolC5t34626H Brassica oleracea HOM05D005992 ORTHO05D007476 1.4e-08 63.9 133 37.6
Carub.0003s0715 Capsella rubella HOM05D005992 ORTHO05D007476 3.1e-08 62.8 70 51.4
A05p40610 Brassica napus HOM05D005992 ORTHO05D007476 4.1e-08 62.4 70 50.0
PGSC0003DMG400020300 Solanum tuberosum HOM05D005992 ORTHO05D007476 4.1e-08 62.4 81 46.9
Carub.0008s0791 Capsella rubella HOM05D005992 ORTHO05D007476 1.2e-07 60.8 111 41.4
Actinidia23817 Actinidia chinensis HOM05D005992 ORTHO05D007476 2.6e-07 59.7 75 48.0
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 3.4e-07 59.3 87 47.1
AL3G18940 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 7.7e-07 58.2 145 31.0


User provided reference genes

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