Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 2.6e-103 378.6 181 100.0
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 8.5e-70 267.3 175 73.7
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 9.4e-69 263.8 175 72.6
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 8.2e-65 250.8 182 68.1
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 2.4e-64 249.2 181 64.6
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 3.5e-63 245.4 163 69.9
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 2.5e-61 239.2 181 60.2
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 2.7e-60 235.7 163 69.9
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 6.1e-60 234.6 181 60.8
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 1.0e-59 233.8 177 62.7
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 6.7e-59 231.1 175 62.9
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 6.7e-59 231.1 181 61.3
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 6.7e-59 231.1 175 61.1
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 2.0e-58 229.6 181 61.3
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 2.0e-58 229.6 181 60.8
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 2.6e-58 229.2 182 58.2
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 2.6e-58 229.2 168 64.9
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 5.7e-58 228.0 174 59.8
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 7.5e-58 227.6 181 58.6
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 7.5e-58 227.6 181 58.6
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 1.3e-57 226.9 181 59.7
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 1.7e-57 226.5 160 60.6
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 2.2e-57 226.1 167 64.7
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 2.2e-57 226.1 181 58.6
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 3.7e-57 225.3 181 59.1
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 1.1e-56 223.8 182 57.7
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 2.4e-56 222.6 179 59.8
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 2.4e-56 222.6 178 60.1
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 5.3e-56 221.5 163 62.6
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 7.0e-56 221.1 180 59.4
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 9.1e-56 220.7 178 58.4
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 9.1e-56 220.7 181 60.2
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 9.1e-56 220.7 164 63.4
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.2e-55 220.3 162 63.6
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 1.6e-55 219.9 178 54.5
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 1.6e-55 219.9 181 56.9
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 2.7e-55 219.2 183 58.5
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 3.5e-55 218.8 162 63.0
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 3.5e-55 218.8 163 62.6
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 6.5e-54 214.5 170 59.4
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 1.1e-53 213.8 173 60.1
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 3.2e-53 212.2 164 63.4
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 3.2e-53 212.2 167 61.7
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 9.4e-53 210.7 174 57.5
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 2.7e-52 209.1 166 62.0
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 4.7e-52 208.4 180 58.3
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 1.8e-51 206.5 179 56.4
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 4.0e-51 205.3 181 55.8
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 5.2e-51 204.9 162 56.8
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 2.0e-50 203.0 179 52.5
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 2.6e-50 202.6 182 53.8
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 5.7e-50 201.4 185 53.0
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.7e-49 199.9 177 52.0
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 2.2e-49 199.5 162 59.3
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 1.1e-48 197.2 162 60.5
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 4.1e-48 195.3 176 51.7
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 7.0e-48 194.5 176 52.8
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 4.5e-47 191.8 164 54.3
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 5.9e-47 191.4 167 53.3
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 1.0e-46 190.7 176 51.7
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 2.3e-46 189.5 178 51.7
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 5.0e-46 188.3 156 55.8
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 1.1e-45 187.2 161 55.9
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 1.1e-45 187.2 182 47.3
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 2.5e-45 186.0 162 51.2
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 3.3e-45 185.7 181 51.4
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 4.2e-45 185.3 164 56.7
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 5.5e-45 184.9 161 52.2
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 5.5e-45 184.9 161 52.8
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 5.5e-45 184.9 161 52.8
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 5.5e-45 184.9 161 52.8
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 7.2e-45 184.5 179 50.8
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 1.6e-44 183.3 181 50.8
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 1.6e-44 183.3 181 48.6
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 8.0e-44 181.0 186 49.5
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 1.5e-42 176.8 161 51.6
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 9.8e-42 174.1 142 57.7
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 1.3e-41 173.7 167 53.3
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 1.7e-41 173.3 133 63.2
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 2.4e-40 169.5 181 48.6
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 3.1e-40 169.1 186 44.6
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.2e-39 167.2 109 70.6
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 1.2e-39 167.2 167 49.1
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 8.6e-38 161.0 120 60.8
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 8.6e-38 161.0 181 45.9
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 1.2e-34 150.6 169 51.5
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 8.3e-33 144.4 252 37.3
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 7.0e-32 141.4 188 43.1
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 2.5e-29 132.9 162 45.1
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 9.5e-29 131.0 162 45.1
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 8.0e-28 127.9 174 38.5
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 1.3e-22 110.5 170 34.1
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 3.0e-22 109.4 91 57.1
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 8.1e-20 101.3 77 61.0
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 4.0e-19 99.0 169 33.1
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 2.0e-18 96.7 149 37.6
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 4.4e-18 95.5 55 78.2
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 8.3e-17 91.3 111 44.1
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 9.2e-16 87.8 136 39.7
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 3.5e-15 85.9 230 28.3
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 8.6e-14 81.3 173 32.4
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 1.9e-13 80.1 76 52.6
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.4e-08 63.9 35 71.4


User provided reference genes

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