Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 2.6e-39 164.9 78 100.0
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 3.6e-33 144.4 78 85.9
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 3.4e-31 137.9 76 81.6
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 9.8e-31 136.3 77 83.1
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 2.2e-30 135.2 78 78.2
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.2e-30 135.2 77 79.2
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 3.7e-30 134.4 78 78.2
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 4.8e-30 134.0 78 76.9
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 6.3e-30 133.7 77 77.9
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 6.3e-30 133.7 77 77.9
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 8.3e-30 133.3 76 78.9
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.8e-29 132.1 76 78.9
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 1.8e-29 132.1 74 82.4
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 1.8e-29 132.1 77 79.2
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 1.8e-29 132.1 78 75.6
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 2.4e-29 131.7 74 82.4
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 3.1e-29 131.3 77 75.3
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 4.1e-29 131.0 78 76.9
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 4.1e-29 131.0 77 76.6
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 5.4e-29 130.6 78 76.9
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 7.0e-29 130.2 77 76.6
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 1.2e-28 129.4 73 82.2
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 1.6e-28 129.0 74 79.7
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 2.7e-28 128.3 77 72.7
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 3.5e-28 127.9 76 78.9
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 4.5e-28 127.5 68 82.4
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 5.9e-28 127.1 78 73.1
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 5.9e-28 127.1 77 75.3
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 5.9e-28 127.1 76 75.0
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 7.7e-28 126.7 78 74.4
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 1.0e-27 126.3 76 73.7
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 1.3e-27 125.9 74 75.7
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 1.3e-27 125.9 77 71.4
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 1.3e-27 125.9 77 71.4
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 1.7e-27 125.6 77 71.4
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 2.2e-27 125.2 75 76.0
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 2.2e-27 125.2 75 76.0
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 2.2e-27 125.2 75 76.0
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 3.8e-27 124.4 73 74.0
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 8.5e-27 123.2 75 70.7
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 1.1e-26 122.9 75 73.3
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 1.9e-26 122.1 77 68.8
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 3.2e-26 121.3 75 73.3
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 3.2e-26 121.3 75 72.0
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 3.2e-26 121.3 77 67.5
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 4.2e-26 120.9 75 69.3
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 7.2e-26 120.2 75 69.3
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.2e-25 119.4 70 77.1
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 1.2e-25 119.4 74 68.9
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 1.6e-25 119.0 73 74.0
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 1.6e-25 119.0 78 69.2
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.7e-25 118.2 75 72.0
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 2.7e-25 118.2 73 74.0
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 3.6e-25 117.9 75 72.0
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.0e-24 116.3 76 68.4
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.4e-24 115.9 73 69.9
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 1.4e-24 115.9 73 69.9
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 1.4e-24 115.9 73 71.2
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 1.4e-24 115.9 73 71.2
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 1.4e-24 115.9 73 71.2
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 1.4e-24 115.9 73 71.2
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 1.4e-24 115.9 73 71.2
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 1.4e-24 115.9 73 69.9
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 1.4e-24 115.9 73 69.9
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.8e-24 115.5 73 69.9
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 1.8e-24 115.5 73 69.9
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 2.3e-24 115.2 73 69.9
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 3.0e-24 114.8 76 69.7
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.0e-24 114.4 73 67.1
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 5.2e-24 114.0 73 69.9
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 8.8e-24 113.2 73 69.9
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 8.8e-24 113.2 67 77.6
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 1.2e-23 112.8 71 70.4
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 1.5e-23 112.5 70 74.3
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 2.0e-23 112.1 73 69.9
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 4.4e-23 110.9 63 77.8
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 4.4e-23 110.9 76 68.4
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 5.7e-23 110.5 70 72.9
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 7.5e-23 110.2 75 65.3
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 9.8e-23 109.8 74 63.5
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 9.8e-23 109.8 73 61.6
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.2e-22 108.6 73 68.5
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.2e-22 108.6 74 62.2
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.7e-22 107.8 73 61.6
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.7e-22 107.8 73 61.6
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 6.3e-22 107.1 72 65.3
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 1.1e-21 106.3 68 67.6
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 1.1e-21 106.3 68 67.6
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 1.8e-21 105.5 75 61.3
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.4e-21 105.1 75 61.3
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 3.1e-21 104.8 72 62.5
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 3.1e-21 104.8 77 63.6
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.1e-21 104.8 63 73.0
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 9.1e-21 103.2 73 63.0
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 2.0e-20 102.1 68 66.2
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.0e-20 102.1 73 67.1
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 3.5e-20 101.3 67 68.7
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 4.5e-20 100.9 67 67.2
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 4.5e-20 100.9 67 67.2
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 4.5e-20 100.9 67 67.2
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.7e-20 100.1 75 60.0
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.3e-19 99.4 75 60.0
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.3e-19 99.4 75 60.0
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.3e-19 99.4 78 51.3
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.3e-19 99.4 70 64.3
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 1.7e-19 99.0 70 61.4
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 1.7e-19 99.0 70 61.4
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.9e-19 98.2 75 58.7
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.0e-19 97.4 75 58.7
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 8.6e-19 96.7 73 60.3
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 8.6e-19 96.7 73 60.3
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 8.6e-19 96.7 73 60.3
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 7.2e-18 93.6 73 57.5
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 9.5e-18 93.2 65 63.1
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.6e-17 92.4 75 53.3
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 2.1e-17 92.0 64 60.9
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.8e-17 91.7 62 66.1
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 2.6e-15 85.1 75 58.7
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 9.8e-15 83.2 50 70.0
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.3e-14 82.8 59 64.4
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.2e-13 78.2 49 69.4
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 6.8e-08 60.5 78 39.7
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.2e-07 59.7 71 43.7
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 7.5e-07 57.0 71 42.3
TAR371G0913 Trochodendron aralioides HOM05D006437 ORTHO05D007973 9.8e-07 56.6 32 68.8
TAR371G0323 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.9e-06 55.1 35 60.0


User provided reference genes

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