Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr09g0334351 Lupinus albus HOM05D004420 ORTHO05D005048 2.0e-190 669.1 376 100.0
Ca_02853_v3 Cicer arietinum L. HOM05D004420 ORTHO05D005048 2.3e-125 453.0 380 73.4
VMungo0251G1478 Vigna mungo HOM05D004420 ORTHO05D005048 4.7e-123 445.3 379 72.0
Phvul.003G270300 Phaseolus vulgaris HOM05D004420 ORTHO05D005048 2.3e-122 443.0 379 69.7
Medtr8g073305 Medicago truncatula HOM05D004420 ORTHO05D005048 1.3e-120 437.2 383 72.1
Psat4g103680 Pisum sativum HOM05D004420 ORTHO05D005048 5.6e-116 421.8 386 68.9
TPR.G13730 Trifolium pratense HOM05D004420 ORTHO05D005048 1.6e-115 420.2 384 71.6
Glyma.01G158300 Glycine max HOM05D004420 ORTHO05D005048 1.2e-113 414.1 381 68.0
Glyma.09G197900 Glycine max HOM05D004420 ORTHO05D005048 2.4e-111 406.4 356 72.8
Lalb_Chr05g0214821 Lupinus albus HOM05D004420 ORTHO05D005048 6.0e-110 401.7 382 67.8
arahy.Tifrunner.gnm1.ann1.7Y7MXI Arachis hypogaea HOM05D004420 ORTHO05D005048 2.5e-108 396.4 382 66.0
arahy.Tifrunner.gnm1.ann1.PTZ9GF Arachis hypogaea HOM05D004420 ORTHO05D005048 2.5e-108 396.4 382 66.0
Glyma.16G111400 Glycine max HOM05D004420 ORTHO05D005048 6.2e-107 391.7 357 69.7
Glyma.11G086400 Glycine max HOM05D004420 ORTHO05D005048 5.8e-105 385.2 379 65.2
Phvul.002G117000 Phaseolus vulgaris HOM05D004420 ORTHO05D005048 4.2e-103 379.0 383 61.6
VMungo1215G0928 Vigna mungo HOM05D004420 ORTHO05D005048 2.6e-97 359.8 384 59.1
Lj2g0010108 Lotus japonicus HOM05D004420 ORTHO05D005048 1.1e-95 354.4 382 60.5
Lj4g0016332 Lotus japonicus HOM05D004420 ORTHO05D005048 7.4e-92 341.7 377 57.6
Lalb_Chr09g0324761 Lupinus albus HOM05D004420 ORTHO05D005048 1.3e-91 340.9 379 59.4
Lalb_Chr16g0380091 Lupinus albus HOM05D004420 ORTHO05D005048 2.1e-86 323.6 379 60.2
Cfa007085 Carpinus fangiana HOM05D004420 ORTHO05D005048 3.9e-85 319.3 393 55.7
CiPaw.08G182000 Carya illinoinensis HOM05D004420 ORTHO05D005048 6.3e-83 312.0 377 54.6
Cpa.g.sc6.366 Carica papaya HOM05D004420 ORTHO05D005048 4.1e-82 309.3 377 54.4
FAN19G0089 Fragaria x ananassa HOM05D004420 ORTHO05D005048 9.0e-82 308.1 378 54.8
RcHm_v2.0_Chr2g0097081 Rosa chinensis HOM05D004420 ORTHO05D005048 1.5e-81 307.4 380 54.7
FvH4_1g10260 Fragaria vesca HOM05D004420 ORTHO05D005048 2.6e-81 306.6 378 54.5
FAN26G2737 Fragaria x ananassa HOM05D004420 ORTHO05D005048 2.6e-81 306.6 378 54.5
QL06p053029 Quercus lobata HOM05D004420 ORTHO05D005048 4.5e-81 305.8 392 54.1
Potri.007G063000 Populus trichocarpa HOM05D004420 ORTHO05D005048 8.4e-80 301.6 390 51.0
Prupe.7G183600 Prunus persica HOM05D004420 ORTHO05D005048 8.4e-80 301.6 380 50.5
Manes.02G114400 Manihot esculenta HOM05D004420 ORTHO05D005048 7.9e-78 295.0 398 53.0
Dinv40192 Davidia involucrata HOM05D004420 ORTHO05D005048 1.3e-77 294.3 379 50.1
Thecc.01G004900 Theobroma cacao HOM05D004420 ORTHO05D005048 1.1e-76 291.2 384 54.2
Sabra05G0084400 Salix brachista HOM05D004420 ORTHO05D005048 1.5e-76 290.8 389 51.2
Duzib147G0341 Durio zibethinus HOM05D004420 ORTHO05D005048 1.9e-76 290.4 381 52.8
MD02G1114600 Malus domestica HOM05D004420 ORTHO05D005048 2.5e-76 290.0 383 52.2
FAN23G0043 Fragaria x ananassa HOM05D004420 ORTHO05D005048 5.7e-76 288.9 378 52.4
Manes.01G155700 Manihot esculenta HOM05D004420 ORTHO05D005048 3.7e-75 286.2 401 47.4
Potri.005G102000 Populus trichocarpa HOM05D004420 ORTHO05D005048 1.5e-73 280.8 385 48.8
MD15G1230400 Malus domestica HOM05D004420 ORTHO05D005048 1.1e-71 274.6 378 50.0
MELO3C013712.2 Cucumis melo HOM05D004420 ORTHO05D005048 1.4e-71 274.2 376 51.9
CsaV3_3G000180 Cucumis sativus L. HOM05D004420 ORTHO05D005048 1.4e-71 274.2 376 51.9
CANSAT25G3726 Cannabis sativa HOM05D004420 ORTHO05D005048 2.5e-71 273.5 388 54.1
CiPaw.07G002200 Carya illinoinensis HOM05D004420 ORTHO05D005048 3.2e-71 273.1 327 57.5
CSS0013805 Camellia sinensis var. sinensis HOM05D004420 ORTHO05D005048 1.2e-70 271.2 381 50.4
TWI09G0210 Tripterygium wilfordii HOM05D004420 ORTHO05D005048 4.6e-70 269.2 379 46.7
ClCG10G000160 Citrullus lanatus HOM05D004420 ORTHO05D005048 7.4e-68 261.9 389 50.1
Ciclev10025852m.g Citrus clementina HOM05D004420 ORTHO05D005048 7.4e-68 261.9 384 46.1
COL.COLO4_22555 Corchorus olitorius HOM05D004420 ORTHO05D005048 4.1e-66 256.1 342 52.0
Dinv40193 Davidia involucrata HOM05D004420 ORTHO05D005048 2.6e-65 253.4 379 47.2
CSS0016949 Camellia sinensis var. sinensis HOM05D004420 ORTHO05D005048 3.4e-65 253.1 381 45.7
CSS0044881 Camellia sinensis var. sinensis HOM05D004420 ORTHO05D005048 3.4e-65 253.1 381 45.7
Gohir.A02G178300 Gossypium hirsutum HOM05D004420 ORTHO05D005048 1.3e-64 251.1 393 49.4
Gohir.D03G001500 Gossypium hirsutum HOM05D004420 ORTHO05D005048 1.7e-64 250.8 389 49.4
Gorai.003G001900 Gossypium raimondii HOM05D004420 ORTHO05D005048 2.2e-64 250.4 391 48.8
Eucgr.I02220 Eucalyptus grandis HOM05D004420 ORTHO05D005048 5.0e-64 249.2 374 49.2
Duzib264G0151 Durio zibethinus HOM05D004420 ORTHO05D005048 1.9e-63 247.3 384 47.7
TWI53G1718 Tripterygium wilfordii HOM05D004420 ORTHO05D005048 9.4e-63 245.0 355 47.6
Sed0027819 Sechium edule HOM05D004420 ORTHO05D005048 7.9e-62 241.9 381 49.9
Actinidia17355 Actinidia chinensis HOM05D004420 ORTHO05D005048 6.7e-61 238.8 379 41.7
Rhsim10G0195100 Rhododendron simsii HOM05D004420 ORTHO05D005048 2.6e-60 236.9 377 46.7
Hma1.2p1_0300F.1_g117950 Hydrangea macrophylla HOM05D004420 ORTHO05D005048 4.4e-60 236.1 381 47.2
Actinidia28747 Actinidia chinensis HOM05D004420 ORTHO05D005048 1.7e-59 234.2 366 48.9
Actinidia35683 Actinidia chinensis HOM05D004420 ORTHO05D005048 2.8e-59 233.4 380 47.1
PGR119G1834 Punica granatum HOM05D004420 ORTHO05D005048 1.1e-58 231.5 381 46.7
Atru.chr3.127 Acer truncatum HOM05D004420 ORTHO05D005048 4.5e-57 226.1 382 47.4
Oeu045734.2 Olea europaea HOM05D004420 ORTHO05D005048 1.7e-56 224.2 393 44.8
Cc07_g11920 Coffea canephora HOM05D004420 ORTHO05D005048 5.0e-56 222.6 394 44.9
Oeu043391.2 Olea europaea HOM05D004420 ORTHO05D005048 2.7e-54 216.9 395 43.8
Actinidia22893 Actinidia chinensis HOM05D004420 ORTHO05D005048 3.6e-54 216.5 379 39.8
Nitab4.5_0004608g0040 Nicotiana tabacum HOM05D004420 ORTHO05D005048 4.7e-54 216.1 396 42.9
vmacro20627 Vaccinium macrocarpon HOM05D004420 ORTHO05D005048 6.1e-54 215.7 364 43.7
Lj2P500T27 Lonicera japonica HOM05D004420 ORTHO05D005048 1.0e-53 214.9 379 42.0
CAN.G1238.15 Capsicum annuum HOM05D004420 ORTHO05D005048 5.2e-53 212.6 389 44.0
Nitab4.5_0001467g0050 Nicotiana tabacum HOM05D004420 ORTHO05D005048 1.3e-51 208.0 392 41.6
EL10Ac6g15050 Beta vulgaris HOM05D004420 ORTHO05D005048 2.2e-51 207.2 382 47.1
Peaxi162Scf00121g00249 Petunia axillaris HOM05D004420 ORTHO05D005048 2.8e-51 206.8 396 43.7
Hma1.2p1_0085F.1_g044630 Hydrangea macrophylla HOM05D004420 ORTHO05D005048 8.2e-51 205.3 383 42.8
PGSC0003DMG400001515 Solanum tuberosum HOM05D004420 ORTHO05D005048 3.1e-50 203.4 395 42.8
Sopen02g027250 Solanum pennellii HOM05D004420 ORTHO05D005048 1.2e-49 201.4 395 42.5
Ah.02g123000 Amaranthus hybridus HOM05D000464 ORTHO05D005048 1.7e-48 197.6 385 42.1
Gohir.A07G173800 Gossypium hirsutum HOM05D004420 ORTHO05D005048 1.7e-48 197.6 339 48.1
Gorai.001G199300 Gossypium raimondii HOM05D004420 ORTHO05D005048 2.5e-47 193.7 340 47.9
Sabra07G0052400 Salix brachista HOM05D004420 ORTHO05D005048 4.2e-47 193.0 327 47.4
Migut.F01091 Erythranthe guttata HOM05D004420 ORTHO05D005048 9.4e-47 191.8 373 44.0
Gohir.D07G178200 Gossypium hirsutum HOM05D004420 ORTHO05D005048 9.4e-47 191.8 340 47.6
GSVIVG01022291001 Vitis vinifera HOM05D004420 ORTHO05D005048 2.7e-46 190.3 377 44.8
Lj4P237T30 Lonicera japonica HOM05D004420 ORTHO05D005048 6.8e-45 185.7 382 42.1
Ah.03g142860 Amaranthus hybridus HOM05D004420 ORTHO05D005048 1.2e-44 184.9 390 43.1
DCAR_014284 Daucus carota HOM05D004420 ORTHO05D005048 6.3e-43 179.1 376 37.2
DCAR_014308 Daucus carota HOM05D004420 ORTHO05D005048 6.3e-43 179.1 376 37.2
Sc07g0001390 Simmondsia chinensis HOM05D004420 ORTHO05D005048 7.0e-42 175.6 380 41.8
TAR376G0940 Trochodendron aralioides HOM05D004420 ORTHO05D005048 1.6e-41 174.5 372 43.3
AUR62002052 Chenopodium quinoa HOM05D004420 ORTHO05D005048 2.7e-41 173.7 380 36.6
THA.LOC104819714 Tarenaya hassleriana HOM05D004420 ORTHO05D005048 3.5e-41 173.3 391 34.5
AUR62003743 Chenopodium quinoa HOM05D004420 ORTHO05D005048 5.9e-41 172.6 263 43.7
TAR381G0338 Trochodendron aralioides HOM05D004420 ORTHO05D005048 1.9e-39 167.5 331 47.4
SalBow2G0301 Salvia bowleyana HOM05D004420 ORTHO05D005048 3.2e-39 166.8 385 41.3
SalBow2G0742 Salvia bowleyana HOM05D004420 ORTHO05D005048 3.2e-39 166.8 385 41.3
TAR625G1485 Trochodendron aralioides HOM05D004420 ORTHO05D005048 2.1e-38 164.1 376 41.8
HanXRQChr16g0531911 Helianthus annuus HOM05D004420 ORTHO05D005048 6.1e-38 162.5 378 40.2
THA.LOC104807425 Tarenaya hassleriana HOM05D004420 ORTHO05D005048 5.2e-37 159.5 382 36.9
HanXRQChr16g0531901 Helianthus annuus HOM05D004420 ORTHO05D005048 1.5e-36 157.9 377 40.3
Aa31LG8G14840 Aethionema arabicum HOM05D004420 ORTHO05D005048 4.4e-36 156.4 385 34.0
Nn6g31686 Nelumbo nucifera HOM05D004420 ORTHO05D005048 7.5e-36 155.6 316 47.2
PSO210G4741 Papaver somniferum HOM05D004420 ORTHO05D005048 7.5e-36 155.6 351 40.7
AL3G50510 Arabidopsis lyrata HOM05D004420 ORTHO05D005048 6.3e-35 152.5 375 36.0
PSO761G0558 Papaver somniferum HOM05D004420 ORTHO05D005048 1.8e-34 151.0 352 40.6
Carub.0007s0482 Capsella rubella HOM05D004420 ORTHO05D005048 4.1e-34 149.8 380 34.2
SGA_v2.0_scaffold10G05298 Striga asiatica HOM05D004420 ORTHO05D005048 1.6e-33 147.9 362 39.8
Sopen03g005950 Solanum pennellii HOM05D004420 ORTHO05D005048 5.9e-33 146.0 314 36.9
Solyc03g032100.2 Solanum lycopersicum HOM05D004420 ORTHO05D005048 7.7e-33 145.6 314 37.3
AT4G35510 Arabidopsis thaliana HOM05D004420 ORTHO05D005048 1.5e-31 141.4 383 34.7
ECA246G3765 Erigeron canadensis HOM05D004420 ORTHO05D005048 2.5e-31 140.6 383 37.6
PGSC0003DMG400018682 Solanum tuberosum HOM05D004420 ORTHO05D005048 2.5e-31 140.6 314 42.7
CiPaw.13G121300 Carya illinoinensis HOM05D004420 ORTHO05D005048 1.2e-30 138.3 180 60.0
Carub.0003s3163 Capsella rubella HOM05D004420 ORTHO05D005048 3.6e-30 136.7 375 33.6
Aqoxy6G01610 Aquilegia oxysepala HOM05D004420 ORTHO05D005048 1.0e-29 135.2 379 36.7
Eucgr.J02539 Eucalyptus grandis HOM05D004420 ORTHO05D005048 1.4e-29 134.8 190 48.9
Peaxi162Scf00580g00013 Petunia axillaris HOM05D004420 ORTHO05D005048 2.3e-29 134.0 204 52.9
AL7G15660 Arabidopsis lyrata HOM05D004420 ORTHO05D005048 5.2e-29 132.9 381 34.6
Migut.F00308 Erythranthe guttata HOM05D004420 ORTHO05D005048 1.5e-28 131.3 382 39.0
CAN.G354.13 Capsicum annuum HOM05D004420 ORTHO05D005048 1.3e-27 128.3 325 39.7
CARHR243840 Cardamine hirsuta HOM05D004420 ORTHO05D005048 4.9e-27 126.3 377 32.9
unitig_46.g18801 Utricularia gibba HOM05D004420 ORTHO05D005048 4.9e-27 126.3 378 31.0
Sp3g30900 Schrenkiella parvula HOM05D004420 ORTHO05D005048 1.2e-25 121.7 309 35.3
SGA_v2.0_scaffold60G21098 Striga asiatica HOM05D004420 ORTHO05D005048 3.5e-25 120.2 304 34.2
unitig_52.g17736 Utricularia gibba HOM05D004420 ORTHO05D005048 1.0e-24 118.6 288 43.1
Thhalv10025668m.g Eutrema salsugineum HOM05D004420 ORTHO05D005048 5.0e-24 116.3 384 31.5
Sp7g33290 Schrenkiella parvula HOM05D004420 ORTHO05D005048 9.5e-23 112.1 307 33.2
C07p05740 Brassica napus HOM05D004420 ORTHO05D005048 2.8e-22 110.5 313 36.1
BcaB03g16523 Brassica carinata HOM05D004420 ORTHO05D005048 3.6e-22 110.2 327 33.0
Thhalv10022789m.g Eutrema salsugineum HOM05D004420 ORTHO05D005048 8.0e-22 109.0 324 33.6
BcaC06g36286 Brassica carinata HOM05D004420 ORTHO05D005048 1.0e-21 108.6 313 36.1
MBI08_g12255_MAGBIO Magnolia biondii HOM05D004420 ORTHO05D005048 1.0e-21 108.6 368 36.1
Lsat_1_v5_gn_3_67941 Lactuca sativa HOM05D004420 ORTHO05D005048 1.2e-20 105.1 221 46.2
CDE05G3647 Ceratophyllum demersum HOM05D004420 ORTHO05D005048 7.5e-20 102.4 368 30.4
BraA06t26325Z Brassica rapa HOM05D004420 ORTHO05D005048 4.9e-19 99.8 301 34.2
A06p33900 Brassica napus HOM05D004420 ORTHO05D005048 6.4e-19 99.4 301 34.6
BcaB08g34743 Brassica carinata HOM05D004420 ORTHO05D005048 1.9e-18 97.8 305 32.1
Solyc02g082570.3 Solanum lycopersicum HOM05D004420 ORTHO05D005048 1.9e-18 97.8 158 48.7
Lsat_1_v5_gn_8_112420 Lactuca sativa HOM05D004420 ORTHO05D005048 2.4e-18 97.4 333 33.6
BolC3t18106H Brassica oleracea HOM05D004420 ORTHO05D005048 2.0e-17 94.4 324 33.0
BcaC01g02911 Brassica carinata HOM05D004420 ORTHO05D005048 6.2e-14 82.8 324 32.4
C03p58480 Brassica napus HOM05D004420 ORTHO05D005048 6.2e-14 82.8 324 32.4
BcaNung03633 Brassica carinata HOM05D004420 ORTHO05D005048 4.4e-12 76.6 294 30.6
BraA07t28141Z Brassica rapa HOM05D004420 ORTHO05D005048 6.4e-11 72.8 330 30.3
BraA01t00293Z Brassica rapa HOM05D004420 ORTHO05D005048 1.1e-10 72.0 300 30.0
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 1.9e-10 71.2 309 28.8
BolC7t40973H Brassica oleracea HOM05D004420 ORTHO05D005048 4.1e-10 70.1 313 31.3
A01p03090 Brassica napus HOM05D004420 ORTHO05D005048 7.1e-10 69.3 300 30.0
BolC1t00331H Brassica oleracea HOM05D004420 ORTHO05D005048 8.6e-08 62.4 208 31.2
THA.LOC104804296 Tarenaya hassleriana HOM05D004420 ORTHO05D005048 2.1e-06 57.8 149 33.6
Thhalv10022985m.g Eutrema salsugineum HOM05D004420 ORTHO05D005048 2.8e-06 57.4 142 34.5


User provided reference genes

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